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Datasets in the real world are often complex and to some degree hierarchical, with groups and sub-groups of data sharing common characteristics at different levels of abstraction. Understanding and uncovering the hidden structure of these datasets is an important task that has many practical applications. To address this challenge, we present a new and general method for building relational data trees by exploiting the learning dynamics of the Restricted Boltzmann Machine (RBM). Our method is based on the mean-field approach, derived from the Plefka expansion, and developed in the context of disordered systems. It is designed to be easily interpretable. We tested our method in an artificially created hierarchical dataset and on three different real-world datasets (images of digits, mutations in the human genome, and a homologous family of proteins). The method is able to automatically identify the hierarchical structure of the data. This could be useful in the study of homologous protein sequences, where the relationships between proteins are critical for understanding their function and evolution.

Text Simplification is an ongoing problem in Natural Language Processing, solution to which has varied implications. In conjunction with the TSAR-2022 Workshop @EMNLP2022 Lexical Simplification is the process of reducing the lexical complexity of a text by replacing difficult words with easier to read (or understand) expressions while preserving the original information and meaning. This paper explains the work done by our team "teamPN" for English sub task. We created a modular pipeline which combines modern day transformers based models with traditional NLP methods like paraphrasing and verb sense disambiguation. We created a multi level and modular pipeline where the target text is treated according to its semantics(Part of Speech Tag). Pipeline is multi level as we utilize multiple source models to find potential candidates for replacement, It is modular as we can switch the source models and their weight-age in the final re-ranking.

Deep learning based methods for single-image super-resolution (SR) have drawn a lot of attention lately. In particular, various papers have shown that the learning stage can be performed on a single image, resulting in the so-called internal approaches. The SinGAN method is one of these contributions, where the distribution of image patches is learnt on the image at hand and propagated at finer scales. Now, there are situations where some statistical a priori can be assumed for the final image. In particular, many natural phenomena yield images having power law Fourier spectrum, such as clouds and other texture images. In this work, we show how such a priori information can be integrated into an internal super-resolution approach, by constraining the learned up-sampling procedure of SinGAN. We consider various types of constraints, related to the Fourier power spectrum, the color histograms and the consistency of the upsampling scheme. We demonstrate on various experiments that these constraints are indeed satisfied, but also that some perceptual quality measures can be improved by the proposed approach.

Procedural content generation (PCG) is a growing field, with numerous applications in the video game industry, and great potential to help create better games at a fraction of the cost of manual creation. However, much of the work in PCG is focused on generating relatively straightforward levels in simple games, as it is challenging to design an optimisable objective function for complex settings. This limits the applicability of PCG to more complex and modern titles, hindering its adoption in industry. Our work aims to address this limitation by introducing a compositional level generation method, which recursively composes simple, low-level generators together to construct large and complex creations. This approach allows for easily-optimisable objectives and the ability to design a complex structure in an interpretable way by referencing lower-level components. We empirically demonstrate that our method outperforms a non-compositional baseline by more accurately satisfying a designer's functional requirements in several tasks. Finally, we provide a qualitative showcase (in Minecraft) illustrating the large and complex, but still coherent, structures that were generated using simple base generators.

A Deep Neural Network (DNN) is a composite function of vector-valued functions, and in order to train a DNN, it is necessary to calculate the gradient of the loss function with respect to all parameters. This calculation can be a non-trivial task because the loss function of a DNN is a composition of several nonlinear functions, each with numerous parameters. The Backpropagation (BP) algorithm leverages the composite structure of the DNN to efficiently compute the gradient. As a result, the number of layers in the network does not significantly impact the complexity of the calculation. The objective of this paper is to express the gradient of the loss function in terms of a matrix multiplication using the Jacobian operator. This can be achieved by considering the total derivative of each layer with respect to its parameters and expressing it as a Jacobian matrix. The gradient can then be represented as the matrix product of these Jacobian matrices. This approach is valid because the chain rule can be applied to a composition of vector-valued functions, and the use of Jacobian matrices allows for the incorporation of multiple inputs and outputs. By providing concise mathematical justifications, the results can be made understandable and useful to a broad audience from various disciplines.

The scholarly publication space is growing steadily not just in numbers but also in complexity due to collaboration between individuals from within and across fields of research. This paper presents a hierarchical classification system that automatically categorizes a scholarly publication using its abstract into a three-tier hierarchical label set of fields (discipline-field-subfield). This system enables a holistic view about the interdependence of research activities in the mentioned hierarchical tiers in terms of knowledge production through articles and impact through citations. The classification system (44 disciplines - 738 fields - 1,501 subfields) utilizes and is able to cope with 160 million abstract snippets in Microsoft Academic Graph (Version 2018-05-17) using batch training in a modularized and distributed fashion to address and assess interdisciplinarity and inter-field classifications. In addition, we have explored multi-class classifications in both the single-label and multi-label settings. In total, we have conducted 3,140 experiments, in all models (Convolutional Neural Networks, Recurrent Neural Networks, Transformers), the classification accuracy is > 90% in 77.84% and 78.83% of the single-label and multi-label classifications, respectively. We examine the advantages of our classification by its ability to better align research texts and output with disciplines, to adequately classify them in an automated way, as well as to capture the degree of interdisciplinarity in a publication which enables downstream analytics such as field interdisciplinarity. This system (a set of pretrained models) can serve as a backbone to an interactive system of indexing scientific publications.

Multi-object tracking (MOT) is a crucial component of situational awareness in military defense applications. With the growing use of unmanned aerial systems (UASs), MOT methods for aerial surveillance is in high demand. Application of MOT in UAS presents specific challenges such as moving sensor, changing zoom levels, dynamic background, illumination changes, obscurations and small objects. In this work, we present a robust object tracking architecture aimed to accommodate for the noise in real-time situations. We propose a kinematic prediction model, called Deep Extended Kalman Filter (DeepEKF), in which a sequence-to-sequence architecture is used to predict entity trajectories in latent space. DeepEKF utilizes a learned image embedding along with an attention mechanism trained to weight the importance of areas in an image to predict future states. For the visual scoring, we experiment with different similarity measures to calculate distance based on entity appearances, including a convolutional neural network (CNN) encoder, pre-trained using Siamese networks. In initial evaluation experiments, we show that our method, combining scoring structure of the kinematic and visual models within a MHT framework, has improved performance especially in edge cases where entity motion is unpredictable, or the data presents frames with significant gaps.

Graph Neural Networks (GNNs), which generalize deep neural networks to graph-structured data, have drawn considerable attention and achieved state-of-the-art performance in numerous graph related tasks. However, existing GNN models mainly focus on designing graph convolution operations. The graph pooling (or downsampling) operations, that play an important role in learning hierarchical representations, are usually overlooked. In this paper, we propose a novel graph pooling operator, called Hierarchical Graph Pooling with Structure Learning (HGP-SL), which can be integrated into various graph neural network architectures. HGP-SL incorporates graph pooling and structure learning into a unified module to generate hierarchical representations of graphs. More specifically, the graph pooling operation adaptively selects a subset of nodes to form an induced subgraph for the subsequent layers. To preserve the integrity of graph's topological information, we further introduce a structure learning mechanism to learn a refined graph structure for the pooled graph at each layer. By combining HGP-SL operator with graph neural networks, we perform graph level representation learning with focus on graph classification task. Experimental results on six widely used benchmarks demonstrate the effectiveness of our proposed model.

Graph convolutional networks (GCNs) have been successfully applied in node classification tasks of network mining. However, most of these models based on neighborhood aggregation are usually shallow and lack the "graph pooling" mechanism, which prevents the model from obtaining adequate global information. In order to increase the receptive field, we propose a novel deep Hierarchical Graph Convolutional Network (H-GCN) for semi-supervised node classification. H-GCN first repeatedly aggregates structurally similar nodes to hyper-nodes and then refines the coarsened graph to the original to restore the representation for each node. Instead of merely aggregating one- or two-hop neighborhood information, the proposed coarsening procedure enlarges the receptive field for each node, hence more global information can be learned. Comprehensive experiments conducted on public datasets demonstrate the effectiveness of the proposed method over the state-of-art methods. Notably, our model gains substantial improvements when only a few labeled samples are provided.

Recent advances in 3D fully convolutional networks (FCN) have made it feasible to produce dense voxel-wise predictions of volumetric images. In this work, we show that a multi-class 3D FCN trained on manually labeled CT scans of several anatomical structures (ranging from the large organs to thin vessels) can achieve competitive segmentation results, while avoiding the need for handcrafting features or training class-specific models. To this end, we propose a two-stage, coarse-to-fine approach that will first use a 3D FCN to roughly define a candidate region, which will then be used as input to a second 3D FCN. This reduces the number of voxels the second FCN has to classify to ~10% and allows it to focus on more detailed segmentation of the organs and vessels. We utilize training and validation sets consisting of 331 clinical CT images and test our models on a completely unseen data collection acquired at a different hospital that includes 150 CT scans, targeting three anatomical organs (liver, spleen, and pancreas). In challenging organs such as the pancreas, our cascaded approach improves the mean Dice score from 68.5 to 82.2%, achieving the highest reported average score on this dataset. We compare with a 2D FCN method on a separate dataset of 240 CT scans with 18 classes and achieve a significantly higher performance in small organs and vessels. Furthermore, we explore fine-tuning our models to different datasets. Our experiments illustrate the promise and robustness of current 3D FCN based semantic segmentation of medical images, achieving state-of-the-art results. Our code and trained models are available for download: //github.com/holgerroth/3Dunet_abdomen_cascade.