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Linear systems occur throughout engineering and the sciences, most notably as differential equations. In many cases the forcing function for the system is unknown, and interest lies in using noisy observations of the system to infer the forcing, as well as other unknown parameters. In differential equations, the forcing function is an unknown function of the independent variables (typically time and space), and can be modelled as a Gaussian process (GP). In this paper we show how the adjoint of a linear system can be used to efficiently infer forcing functions modelled as GPs, using a truncated basis expansion of the GP kernel. We show how exact conjugate Bayesian inference for the truncated GP can be achieved, in many cases with substantially lower computation than would be required using MCMC methods. We demonstrate the approach on systems of both ordinary and partial differential equations, and show that the basis expansion approach approximates well the true forcing with a modest number of basis vectors. Finally, we show how to infer point estimates for the non-linear model parameters, such as the kernel length-scales, using Bayesian optimisation.

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Parameter inference, i.e. inferring the posterior distribution of the parameters of a statistical model given some data, is a central problem to many scientific disciplines. Posterior inference with generative models is an alternative to methods such as Markov Chain Monte Carlo, both for likelihood-based and simulation-based inference. However, assessing the accuracy of posteriors encoded in generative models is not straightforward. In this paper, we introduce `distance to random point' (DRP) coverage testing as a method to estimate coverage probabilities of generative posterior estimators. Our method differs from previously-existing coverage-based methods, which require posterior evaluations. We prove that our approach is necessary and sufficient to show that a posterior estimator is optimal. We demonstrate the method on a variety of synthetic examples, and show that DRP can be used to test the results of posterior inference analyses in high-dimensional spaces. We also show that our method can detect non-optimal inferences in cases where existing methods fail.

Machine learning models are widely used to solve real-world problems in science and industry. To build robust models, we should quantify the uncertainty of the model's predictions on new data. This study proposes a new method for uncertainty estimation based on the surrogate Gaussian process model. Our method can equip any base model with an accurate uncertainty estimate produced by a separate surrogate. Compared to other approaches, the estimate remains computationally effective with training only one additional model and doesn't rely on data-specific assumptions. The only requirement is the availability of the base model as a black box, which is typical. Experiments for challenging time-series forecasting data show that surrogate model-based methods provide more accurate confidence intervals than bootstrap-based methods in both medium and small-data regimes and different families of base models, including linear regression, ARIMA, and gradient boosting.

Backward Stochastic Differential Equations (BSDEs) have been widely employed in various areas of social and natural sciences, such as the pricing and hedging of financial derivatives, stochastic optimal control problems, optimal stopping problems and gene expression. Most BSDEs cannot be solved analytically and thus numerical methods must be applied to approximate their solutions. There have been a variety of numerical methods proposed over the past few decades as well as many more currently being developed. For the most part, they exist in a complex and scattered manner with each requiring a variety of assumptions and conditions. The aim of the present work is thus to systematically survey various numerical methods for BSDEs, and in particular, compare and categorize them, for further developments and improvements. To achieve this goal, we focus primarily on the core features of each method based on an extensive collection of 333 references: the main assumptions, the numerical algorithm itself, key convergence properties and advantages and disadvantages, to provide an up-to-date coverage of numerical methods for BSDEs, with insightful summaries of each and a useful comparison and categorization.

We construct estimators for the parameters of a parabolic SPDE with one spatial dimension based on discrete observations of a solution in time and space on a bounded domain. We establish central limit theorems for a high-frequency asymptotic regime. The asymptotic variances are shown to be substantially smaller compared to existing estimation methods. Moreover, asymptotic confidence intervals are directly feasible. Our approach builds upon realized volatilities and their asymptotic illustration as response of a log-linear model with spatial explanatory variable. This yields efficient estimators based on realized volatilities with optimal rates of convergence and minimal variances. We demonstrate efficiency gains compared to previous estimation methods numerically and in Monte Carlo simulations.

In recent years, Physics-informed neural networks (PINNs) have been widely used to solve partial differential equations alongside numerical methods because PINNs can be trained without observations and deal with continuous-time problems directly. In contrast, optimizing the parameters of such models is difficult, and individual training sessions must be performed to predict the evolutions of each different initial condition. To alleviate the first problem, observed data can be injected directly into the loss function part. To solve the second problem, a network architecture can be built as a framework to learn a finite difference method. In view of the two motivations, we propose Five-point stencil CNNs (FCNNs) containing a five-point stencil kernel and a trainable approximation function for reaction-diffusion type equations including the heat, Fisher's, Allen-Cahn, and other reaction-diffusion equations with trigonometric function terms. We show that FCNNs can learn finite difference schemes using few data and achieve the low relative errors of diverse reaction-diffusion evolutions with unseen initial conditions. Furthermore, we demonstrate that FCNNs can still be trained well even with using noisy data.

In this paper, we present a numerical strategy to check the strong stability (or GKS-stability) of one-step explicit finite difference schemes for the one-dimensional advection equation with an inflow boundary condition. The strong stability is studied using the Kreiss-Lopatinskii theory. We introduce a new tool, the intrinsic Kreiss-Lopatinskii determinant, which possesses the same regularity as the vector bundle of discrete stable solutions. By applying standard results of complex analysis to this determinant, we are able to relate the strong stability of numerical schemes to the computation of a winding number, which is robust and cheap. The study is illustrated with the O3 scheme and the fifth-order Lax-Wendroff (LW5) scheme together with a reconstruction procedure at the boundary.

Using gradient descent (GD) with fixed or decaying step-size is a standard practice in unconstrained optimization problems. However, when the loss function is only locally convex, such a step-size schedule artificially slows GD down as it cannot explore the flat curvature of the loss function. To overcome that issue, we propose to exponentially increase the step-size of the GD algorithm. Under homogeneous assumptions on the loss function, we demonstrate that the iterates of the proposed \emph{exponential step size gradient descent} (EGD) algorithm converge linearly to the optimal solution. Leveraging that optimization insight, we then consider using the EGD algorithm for solving parameter estimation under both regular and non-regular statistical models whose loss function becomes locally convex when the sample size goes to infinity. We demonstrate that the EGD iterates reach the final statistical radius within the true parameter after a logarithmic number of iterations, which is in stark contrast to a \emph{polynomial} number of iterations of the GD algorithm in non-regular statistical models. Therefore, the total computational complexity of the EGD algorithm is \emph{optimal} and exponentially cheaper than that of the GD for solving parameter estimation in non-regular statistical models while being comparable to that of the GD in regular statistical settings. To the best of our knowledge, it resolves a long-standing gap between statistical and algorithmic computational complexities of parameter estimation in non-regular statistical models. Finally, we provide targeted applications of the general theory to several classes of statistical models, including generalized linear models with polynomial link functions and location Gaussian mixture models.

Many models for point process data are defined through a thinning procedure where locations of a base process (often Poisson) are either kept (observed) or discarded (thinned). In this paper, we go back to the fundamentals of the distribution theory for point processes and provide a colouring theorem that characterizes the joint density of thinned and observed locations in any of such models. In practice, the marginal model of observed points is often intractable, but thinned locations can be instantiated from their conditional distribution and typical data augmentation schemes can be employed to circumvent this problem. Such approaches have been employed in recent publications, but conceptual flaws have been introduced in this literature. We concentrate on an example: the so-called sigmoidal Gaussian Cox process. We apply our general theory to resolve what are contradicting viewpoints in the data augmentation step of the inference procedures therein. Finally, we provide a multitype extension to this process and conduct Bayesian inference on data consisting of positions of 2 different species of trees in Lansing Woods, Illinois.

The conjoining of dynamical systems and deep learning has become a topic of great interest. In particular, neural differential equations (NDEs) demonstrate that neural networks and differential equation are two sides of the same coin. Traditional parameterised differential equations are a special case. Many popular neural network architectures, such as residual networks and recurrent networks, are discretisations. NDEs are suitable for tackling generative problems, dynamical systems, and time series (particularly in physics, finance, ...) and are thus of interest to both modern machine learning and traditional mathematical modelling. NDEs offer high-capacity function approximation, strong priors on model space, the ability to handle irregular data, memory efficiency, and a wealth of available theory on both sides. This doctoral thesis provides an in-depth survey of the field. Topics include: neural ordinary differential equations (e.g. for hybrid neural/mechanistic modelling of physical systems); neural controlled differential equations (e.g. for learning functions of irregular time series); and neural stochastic differential equations (e.g. to produce generative models capable of representing complex stochastic dynamics, or sampling from complex high-dimensional distributions). Further topics include: numerical methods for NDEs (e.g. reversible differential equations solvers, backpropagation through differential equations, Brownian reconstruction); symbolic regression for dynamical systems (e.g. via regularised evolution); and deep implicit models (e.g. deep equilibrium models, differentiable optimisation). We anticipate this thesis will be of interest to anyone interested in the marriage of deep learning with dynamical systems, and hope it will provide a useful reference for the current state of the art.

This paper focuses on the expected difference in borrower's repayment when there is a change in the lender's credit decisions. Classical estimators overlook the confounding effects and hence the estimation error can be magnificent. As such, we propose another approach to construct the estimators such that the error can be greatly reduced. The proposed estimators are shown to be unbiased, consistent, and robust through a combination of theoretical analysis and numerical testing. Moreover, we compare the power of estimating the causal quantities between the classical estimators and the proposed estimators. The comparison is tested across a wide range of models, including linear regression models, tree-based models, and neural network-based models, under different simulated datasets that exhibit different levels of causality, different degrees of nonlinearity, and different distributional properties. Most importantly, we apply our approaches to a large observational dataset provided by a global technology firm that operates in both the e-commerce and the lending business. We find that the relative reduction of estimation error is strikingly substantial if the causal effects are accounted for correctly.

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