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One of the more complex tasks for researchers using HPC systems is performance monitoring and tuning of their applications. Developing a practice of continuous performance improvement, both for speed-up and efficient use of resources is essential to the long term success of both the HPC practitioner and the research project. Profiling tools provide a nice view of the performance of an application but often have a steep learning curve and rarely provide an easy to interpret view of resource utilization. Lower level tools such as top and htop provide a view of resource utilization for those familiar and comfortable with Linux but a barrier for newer HPC practitioners. To expand the existing profiling and job monitoring options, the MIT Lincoln Laboratory Supercomputing Center created LLoad, a tool that captures a snapshot of the resources being used by a job on a per user basis. LLload is a tool built from standard HPC tools that provides an easy way for a researcher to track resource usage of active jobs. We explain how the tool was designed and implemented and provide insight into how it is used to aid new researchers in developing their performance monitoring skills as well as guide researchers in their resource requests.

Large language models are increasingly solving tasks that are commonly believed to require human-level reasoning ability. However, these models still perform very poorly on benchmarks of general intelligence such as the Abstraction and Reasoning Corpus (ARC). In this paper, we approach ARC as a programming-by-examples problem, and introduce a novel and scalable method for language model self-improvement called Code Iteration (CodeIt). Our method iterates between 1) program sampling and hindsight relabeling, and 2) learning from prioritized experience replay. By relabeling the goal of an episode (i.e., the target program output given input) to the realized output produced by the sampled program, our method effectively deals with the extreme sparsity of rewards in program synthesis. Applying CodeIt to the ARC dataset, we demonstrate that prioritized hindsight replay, along with pre-training and data-augmentation, leads to successful inter-task generalization. CodeIt is the first neuro-symbolic approach that scales to the full ARC evaluation dataset. Our method solves 15% of ARC evaluation tasks, achieving state-of-the-art performance and outperforming existing neural and symbolic baselines. Our code is available at //github.com/Qualcomm-AI-research/codeit .

Complex systems, such as brains, markets, and societies, exhibit internal dynamics influenced by external factors. Disentangling delayed external effects from internal dynamics within these systems is often challenging. We propose using a Vector Autoregressive model with eXogenous input (VARX) to capture delayed interactions between internal and external variables. While this model aligns with Granger's statistical formalism for testing "causal relations", the connection between the two is not widely understood. Here, we bridge this gap by providing fundamental equations, user-friendly code, and demonstrations using simulated and real-world data from neuroscience, physiology, sociology, and economics. Our examples illustrate how the model avoids spurious correlation by factoring out external influences from internal dynamics, leading to more parsimonious explanations of the systems. We also provide methods for enhancing model efficiency, such as L2 regularization for limited data and basis functions to cope with extended delays. Additionally, we analyze model performance under various scenarios where model assumptions are violated. MATLAB, Python, and R code are provided for easy adoption: //github.com/lcparra/varx

Recently proposed long-form question answering (QA) systems, supported by large language models (LLMs), have shown promising capabilities. Yet, attributing and verifying their generated abstractive answers can be difficult, and automatically evaluating their accuracy remains an ongoing challenge. In this work, we introduce a new QA task for answering multi-answer questions by summarizing multiple diverse sources in a semi-extractive fashion. Specifically, Semi-extractive Multi-source QA (SEMQA) requires models to output a comprehensive answer, while mixing factual quoted spans -- copied verbatim from given input sources -- and non-factual free-text connectors that glue these spans together into a single cohesive passage. This setting bridges the gap between the outputs of well-grounded but constrained extractive QA systems and more fluent but harder to attribute fully abstractive answers. Particularly, it enables a new mode for language models that leverages their advanced language generation capabilities, while also producing fine in-line attributions by-design that are easy to verify, interpret, and evaluate. To study this task, we create the first dataset of this kind, QuoteSum, with human-written semi-extractive answers to natural and generated questions, and define text-based evaluation metrics. Experimenting with several LLMs in various settings, we find this task to be surprisingly challenging, demonstrating the importance of QuoteSum for developing and studying such consolidation capabilities.

Geometric perception problems are fundamental tasks in robotics and computer vision. In real-world applications, they often encounter the inevitable issue of outliers, preventing traditional algorithms from making correct estimates. In this paper, we present a novel general-purpose robust estimator TIVM (Thresholding with Intra-class Variance Maximization) that can collaborate with standard non-minimal solvers to efficiently reject outliers for geometric perception problems. First, we introduce the technique of intra-class variance maximization to design a dynamic 2-group thresholding method on the measurement residuals, aiming to distinctively separate inliers from outliers. Then, we develop an iterative framework that robustly optimizes the model by approaching the pure-inlier group using a multi-layered dynamic thresholding strategy as subroutine, in which a self-adaptive mechanism for layer-number tuning is further employed to minimize the user-defined parameters. We validate the proposed estimator on 3 classic geometric perception problems: rotation averaging, point cloud registration and category-level perception, and experiments show that it is robust against 70--90\% of outliers and can converge typically in only 3--15 iterations, much faster than state-of-the-art robust solvers such as RANSAC, GNC and ADAPT. Furthermore, another highlight is that: our estimator can retain approximately the same level of robustness even when the inlier-noise statistics of the problem are fully unknown.

Diffusion models have demonstrated powerful data generation capabilities in various research fields such as image generation. However, in the field of vibration signal generation, the criteria for evaluating the quality of the generated signal are different from that of image generation and there is a fundamental difference between them. At present, there is no research on the ability of diffusion model to generate vibration signal. In this paper, a Time Series Diffusion Method (TSDM) is proposed for vibration signal generation, leveraging the foundational principles of diffusion models. The TSDM uses an improved U-net architecture with attention block, ResBlock and TimeEmbedding to effectively segment and extract features from one-dimensional time series data. It operates based on forward diffusion and reverse denoising processes for time-series generation. Experimental validation is conducted using single-frequency, multi-frequency datasets, and bearing fault datasets. The results show that TSDM can accurately generate the single-frequency and multi-frequency features in the time series and retain the basic frequency features for the diffusion generation results of the bearing fault series. It is also found that the original DDPM could not generate high quality vibration signals, but the improved U-net in TSDM, which applied the combination of attention block and ResBlock, could effectively improve the quality of vibration signal generation. Finally, TSDM is applied to the small sample fault diagnosis of three public bearing fault datasets, and the results show that the accuracy of small sample fault diagnosis of the three datasets is improved by 32.380%, 18.355% and 9.298% at most, respectively.

Biomanufacturing innovation relies on an efficient Design of Experiments (DoEs) to optimize processes and product quality. Traditional DoE methods, ignoring the underlying bioprocessing mechanisms, often suffer from a lack of interpretability and sample efficiency. This limitation motivates us to create a new optimal learning approach for digital twin model calibration. In this study, we consider the cell culture process multi-scale mechanistic model, also known as Biological System-of-Systems (Bio-SoS). This model with a modular design, composed of sub-models, allows us to integrate data across various production processes. To calibrate the Bio-SoS digital twin, we evaluate the mean squared error of model prediction and develop a computational approach to quantify the impact of parameter estimation error of individual sub-models on the prediction accuracy of digital twin, which can guide sample-efficient and interpretable DoEs.

Modern microservice systems have gained widespread adoption due to their high scalability, flexibility, and extensibility. However, the characteristics of independent deployment, decentralization, and frequent dynamic interactions also introduce the risk of cascading failures, making it challenging to achieve accurate failure diagnosis and rapid system recovery. These issues severely impact operation efficiency and user experience. Recognizing the crucial role of failure diagnosis in enhancing the stability and reliability of microservice systems, researchers have conducted extensive studies and achieved a series of significant outcomes. This survey provides a comprehensive review and primary analysis of 94 papers from 2003 to the present, including an overview of the fundamental concepts, a research framework, and problem statements. These insights aim to help researchers understand the latest research progress in failure diagnosis. Publicly available datasets, toolkits, and evaluation metrics are also compiled to assist practitioners in selecting and validating various techniques, providing a foundation to advance the domain beyond current practices.

Recent years have witnessed the resurgence of knowledge engineering which is featured by the fast growth of knowledge graphs. However, most of existing knowledge graphs are represented with pure symbols, which hurts the machine's capability to understand the real world. The multi-modalization of knowledge graphs is an inevitable key step towards the realization of human-level machine intelligence. The results of this endeavor are Multi-modal Knowledge Graphs (MMKGs). In this survey on MMKGs constructed by texts and images, we first give definitions of MMKGs, followed with the preliminaries on multi-modal tasks and techniques. We then systematically review the challenges, progresses and opportunities on the construction and application of MMKGs respectively, with detailed analyses of the strength and weakness of different solutions. We finalize this survey with open research problems relevant to MMKGs.

Salient object detection is a fundamental problem and has been received a great deal of attentions in computer vision. Recently deep learning model became a powerful tool for image feature extraction. In this paper, we propose a multi-scale deep neural network (MSDNN) for salient object detection. The proposed model first extracts global high-level features and context information over the whole source image with recurrent convolutional neural network (RCNN). Then several stacked deconvolutional layers are adopted to get the multi-scale feature representation and obtain a series of saliency maps. Finally, we investigate a fusion convolution module (FCM) to build a final pixel level saliency map. The proposed model is extensively evaluated on four salient object detection benchmark datasets. Results show that our deep model significantly outperforms other 12 state-of-the-art approaches.