In the evolving landscape of clinical informatics, the integration and utilization of software tools developed through governmental funding represent a pivotal advancement in research and application. However, the dispersion of these tools across various repositories, with no centralized knowledge base, poses significant challenges to leveraging their full potential. This study introduces an automated methodology to bridge this gap by systematically extracting GitHub repository URLs from academic papers indexed in arXiv, focusing on the field of clinical informatics. Our approach encompasses querying the arXiv API for relevant papers, cleaning extracted GitHub URLs, fetching comprehensive repository information via the GitHub API, and analyzing repository maturity based on defined metrics such as stars, forks, open issues, and contributors. The process is designed to be robust, incorporating error handling and rate limiting to ensure compliance with API constraints. Preliminary findings demonstrate the efficacy of this methodology in compiling a centralized knowledge base of NIH-funded software tools, laying the groundwork for an enriched understanding and utilization of these resources within the clinical informatics community. We propose the future integration of Large Language Models (LLMs) to generate concise summaries and evaluations of the tools. This approach facilitates the discovery and assessment of clinical informatics tools and also enables ongoing monitoring of new and actively updated repositories, revolutionizing how researchers access and leverage federally funded software. The implications of this study extend beyond simplification of access to valuable resources; it proposes a scalable model for the dynamic aggregation and evaluation of scientific software, encouraging more collaborative, transparent, and efficient research practices in clinical informatics and beyond.
相關內容
Due to the broad range of social media platforms, the requirements of abusive language detection systems are varied and ever-changing. Already a large set of annotated corpora with different properties and label sets were created, such as hate or misogyny detection, but the form and targets of abusive speech are constantly evolving. Since, the annotation of new corpora is expensive, in this work we leverage datasets we already have, covering a wide range of tasks related to abusive language detection. Our goal is to build models cheaply for a new target label set and/or language, using only a few training examples of the target domain. We propose a two-step approach: first we train our model in a multitask fashion. We then carry out few-shot adaptation to the target requirements. Our experiments show that using already existing datasets and only a few-shots of the target task the performance of models improve both monolingually and across languages. Our analysis also shows that our models acquire a general understanding of abusive language, since they improve the prediction of labels which are present only in the target dataset and can benefit from knowledge about labels which are not directly used for the target task.
Automated medical coding, an essential task for healthcare operation and delivery, makes unstructured data manageable by predicting medical codes from clinical documents. Recent advances in deep learning and natural language processing have been widely applied to this task. However, deep learning-based medical coding lacks a unified view of the design of neural network architectures. This review proposes a unified framework to provide a general understanding of the building blocks of medical coding models and summarizes recent advanced models under the proposed framework. Our unified framework decomposes medical coding into four main components, i.e., encoder modules for text feature extraction, mechanisms for building deep encoder architectures, decoder modules for transforming hidden representations into medical codes, and the usage of auxiliary information. Finally, we introduce the benchmarks and real-world usage and discuss key research challenges and future directions.
This article introduces the groundbreaking concept of the financial differential machine learning algorithm through a rigorous mathematical framework. Diverging from existing literature on financial machine learning, the work highlights the profound implications of theoretical assumptions within financial models on the construction of machine learning algorithms. This endeavour is particularly timely as the finance landscape witnesses a surge in interest towards data-driven models for the valuation and hedging of derivative products. Notably, the predictive capabilities of neural networks have garnered substantial attention in both academic research and practical financial applications. The approach offers a unified theoretical foundation that facilitates comprehensive comparisons, both at a theoretical level and in experimental outcomes. Importantly, this theoretical grounding lends substantial weight to the experimental results, affirming the differential machine learning method's optimality within the prevailing context. By anchoring the insights in rigorous mathematics, the article bridges the gap between abstract financial concepts and practical algorithmic implementations.
LLMs can be used on code analysis tasks like code review, vulnerabilities analysis and etc. However, the strengths and limitations of adopting these LLMs to the code analysis are still unclear. In this paper, we delve into LLMs' capabilities in security-oriented program analysis, considering perspectives from both attackers and security analysts. We focus on two representative LLMs, ChatGPT and CodeBert, and evaluate their performance in solving typical analytic tasks with varying levels of difficulty. Our study demonstrates the LLM's efficiency in learning high-level semantics from code, positioning ChatGPT as a potential asset in security-oriented contexts. However, it is essential to acknowledge certain limitations, such as the heavy reliance on well-defined variable and function names, making them unable to learn from anonymized code. For example, the performance of these LLMs heavily relies on the well-defined variable and function names, therefore, will not be able to learn anonymized code. We believe that the concerns raised in this case study deserve in-depth investigation in the future.
Intelligent transportation systems play a crucial role in modern traffic management and optimization, greatly improving traffic efficiency and safety. With the rapid development of generative artificial intelligence (Generative AI) technologies in the fields of image generation and natural language processing, generative AI has also played a crucial role in addressing key issues in intelligent transportation systems, such as data sparsity, difficulty in observing abnormal scenarios, and in modeling data uncertainty. In this review, we systematically investigate the relevant literature on generative AI techniques in addressing key issues in different types of tasks in intelligent transportation systems. First, we introduce the principles of different generative AI techniques, and their potential applications. Then, we classify tasks in intelligent transportation systems into four types: traffic perception, traffic prediction, traffic simulation, and traffic decision-making. We systematically illustrate how generative AI techniques addresses key issues in these four different types of tasks. Finally, we summarize the challenges faced in applying generative AI to intelligent transportation systems, and discuss future research directions based on different application scenarios.
The fusion of causal models with deep learning introducing increasingly intricate data sets, such as the causal associations within images or between textual components, has surfaced as a focal research area. Nonetheless, the broadening of original causal concepts and theories to such complex, non-statistical data has been met with serious challenges. In response, our study proposes redefinitions of causal data into three distinct categories from the standpoint of causal structure and representation: definite data, semi-definite data, and indefinite data. Definite data chiefly pertains to statistical data used in conventional causal scenarios, while semi-definite data refers to a spectrum of data formats germane to deep learning, including time-series, images, text, and others. Indefinite data is an emergent research sphere inferred from the progression of data forms by us. To comprehensively present these three data paradigms, we elaborate on their formal definitions, differences manifested in datasets, resolution pathways, and development of research. We summarize key tasks and achievements pertaining to definite and semi-definite data from myriad research undertakings, present a roadmap for indefinite data, beginning with its current research conundrums. Lastly, we classify and scrutinize the key datasets presently utilized within these three paradigms.
In pace with developments in the research field of artificial intelligence, knowledge graphs (KGs) have attracted a surge of interest from both academia and industry. As a representation of semantic relations between entities, KGs have proven to be particularly relevant for natural language processing (NLP), experiencing a rapid spread and wide adoption within recent years. Given the increasing amount of research work in this area, several KG-related approaches have been surveyed in the NLP research community. However, a comprehensive study that categorizes established topics and reviews the maturity of individual research streams remains absent to this day. Contributing to closing this gap, we systematically analyzed 507 papers from the literature on KGs in NLP. Our survey encompasses a multifaceted review of tasks, research types, and contributions. As a result, we present a structured overview of the research landscape, provide a taxonomy of tasks, summarize our findings, and highlight directions for future work.
As soon as abstract mathematical computations were adapted to computation on digital computers, the problem of efficient representation, manipulation, and communication of the numerical values in those computations arose. Strongly related to the problem of numerical representation is the problem of quantization: in what manner should a set of continuous real-valued numbers be distributed over a fixed discrete set of numbers to minimize the number of bits required and also to maximize the accuracy of the attendant computations? This perennial problem of quantization is particularly relevant whenever memory and/or computational resources are severely restricted, and it has come to the forefront in recent years due to the remarkable performance of Neural Network models in computer vision, natural language processing, and related areas. Moving from floating-point representations to low-precision fixed integer values represented in four bits or less holds the potential to reduce the memory footprint and latency by a factor of 16x; and, in fact, reductions of 4x to 8x are often realized in practice in these applications. Thus, it is not surprising that quantization has emerged recently as an important and very active sub-area of research in the efficient implementation of computations associated with Neural Networks. In this article, we survey approaches to the problem of quantizing the numerical values in deep Neural Network computations, covering the advantages/disadvantages of current methods. With this survey and its organization, we hope to have presented a useful snapshot of the current research in quantization for Neural Networks and to have given an intelligent organization to ease the evaluation of future research in this area.
Deep neural networks have revolutionized many machine learning tasks in power systems, ranging from pattern recognition to signal processing. The data in these tasks is typically represented in Euclidean domains. Nevertheless, there is an increasing number of applications in power systems, where data are collected from non-Euclidean domains and represented as the graph-structured data with high dimensional features and interdependency among nodes. The complexity of graph-structured data has brought significant challenges to the existing deep neural networks defined in Euclidean domains. Recently, many studies on extending deep neural networks for graph-structured data in power systems have emerged. In this paper, a comprehensive overview of graph neural networks (GNNs) in power systems is proposed. Specifically, several classical paradigms of GNNs structures (e.g., graph convolutional networks, graph recurrent neural networks, graph attention networks, graph generative networks, spatial-temporal graph convolutional networks, and hybrid forms of GNNs) are summarized, and key applications in power systems such as fault diagnosis, power prediction, power flow calculation, and data generation are reviewed in detail. Furthermore, main issues and some research trends about the applications of GNNs in power systems are discussed.
We address the task of automatically scoring the competency of candidates based on textual features, from the automatic speech recognition (ASR) transcriptions in the asynchronous video job interview (AVI). The key challenge is how to construct the dependency relation between questions and answers, and conduct the semantic level interaction for each question-answer (QA) pair. However, most of the recent studies in AVI focus on how to represent questions and answers better, but ignore the dependency information and interaction between them, which is critical for QA evaluation. In this work, we propose a Hierarchical Reasoning Graph Neural Network (HRGNN) for the automatic assessment of question-answer pairs. Specifically, we construct a sentence-level relational graph neural network to capture the dependency information of sentences in or between the question and the answer. Based on these graphs, we employ a semantic-level reasoning graph attention network to model the interaction states of the current QA session. Finally, we propose a gated recurrent unit encoder to represent the temporal question-answer pairs for the final prediction. Empirical results conducted on CHNAT (a real-world dataset) validate that our proposed model significantly outperforms text-matching based benchmark models. Ablation studies and experimental results with 10 random seeds also show the effectiveness and stability of our models.
小貼士
登錄享
相關主題
注冊地址： 北京市海淀區羊坊店路18號2幢3層301-191