Multi-task learning requires accurate identification of the correlations between tasks. In real-world time-series, tasks are rarely perfectly temporally aligned; traditional multi-task models do not account for this and subsequent errors in correlation estimation will result in poor predictive performance and uncertainty quantification. We introduce a method that automatically accounts for temporal misalignment in a unified generative model that improves predictive performance. Our method uses Gaussian processes (GPs) to model the correlations both within and between the tasks. Building on the previous work by Kazlauskaiteet al. [2019], we include a separate monotonic warp of the input data to model temporal misalignment. In contrast to previous work, we formulate a lower bound that accounts for uncertainty in both the estimates of the warping process and the underlying functions. Also, our new take on a monotonic stochastic process, with efficient path-wise sampling for the warp functions, allows us to perform full Bayesian inference in the model rather than MAP estimates. Missing data experiments, on synthetic and real time-series, demonstrate the advantages of accounting for misalignments (vs standard unaligned method) as well as modelling the uncertainty in the warping process(vs baseline MAP alignment approach).
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Processing 是一門開源編程語言和與之配套的集成開發環境（IDE）的名稱。Processing 在電子藝術和視覺設計社區被用來教授編程基礎，并運用于大量的新媒體和互動藝術作品中。
In the pivotal variable selection problem, we derive the exact non-asymptotic minimax selector over the class of all $s$-sparse vectors, which is also the Bayes selector with respect to the uniform prior. While this optimal selector is, in general, not realizable in polynomial time, we show that its tractable counterpart (the scan selector) attains the minimax expected Hamming risk to within factor 2, and is also exact minimax with respect to the probability of wrong recovery. As a consequence, we establish explicit lower bounds under the monotone likelihood ratio property and we obtain a tight characterization of the minimax risk in terms of the best separable selector risk. We apply these general results to derive necessary and sufficient conditions of exact and almost full recovery in the location model with light tail distributions and in the problem of group variable selection under Gaussian noise.
Gaussian processes are widely used as priors for unknown functions in statistics and machine learning. To achieve computationally feasible inference for large datasets, a popular approach is the Vecchia approximation, which is an ordered conditional approximation of the data vector that implies a sparse Cholesky factor of the precision matrix. The ordering and sparsity pattern are typically determined based on Euclidean distance of the inputs or locations corresponding to the data points. Here, we propose instead to use a correlation-based distance metric, which implicitly applies the Vecchia approximation in a suitable transformed input space. The correlation-based algorithm can be carried out in quasilinear time in the size of the dataset, and so it can be applied even for iterative inference on unknown parameters in the correlation structure. The Euclidean- and correlation-based Vecchia approximations are equivalent for strictly decreasing isotropic covariances, but the correlation-based approach has two advantages for more complex settings: It can result in more accurate approximations, and it offers a simple, automatic strategy that can be applied to any covariance, even when Euclidean distance is not applicable. We demonstrate these advantages in several settings, including anisotropic, nonstationary, multivariate, and spatio-temporal processes. We also illustrate our method on multivariate spatio-temporal temperature fields produced by a regional climate model.
In recent years, mining the knowledge from asynchronous sequences by Hawkes process is a subject worthy of continued attention, and Hawkes processes based on the neural network have gradually become the most hotly researched fields, especially based on the recurrence neural network (RNN). However, these models still contain some inherent shortcomings of RNN, such as vanishing and exploding gradient and long-term dependency problems. Meanwhile, Transformer based on self-attention has achieved great success in sequential modeling like text processing and speech recognition. Although the Transformer Hawkes process (THP) has gained huge performance improvement, THPs do not effectively utilize the temporal information in the asynchronous events, for these asynchronous sequences, the event occurrence instants are as important as the types of events, while conventional THPs simply convert temporal information into position encoding and add them as the input of transformer. With this in mind, we come up with a new kind of Transformer-based Hawkes process model, Temporal Attention Augmented Transformer Hawkes Process (TAA-THP), we modify the traditional dot-product attention structure, and introduce the temporal encoding into attention structure. We conduct numerous experiments on a wide range of synthetic and real-life datasets to validate the performance of our proposed TAA-THP model, significantly improvement compared with existing baseline models on the different measurements is achieved, including log-likelihood on the test dataset, and prediction accuracies of event types and occurrence times. In addition, through the ablation studies, we vividly demonstrate the merit of introducing additional temporal attention by comparing the performance of the model with and without temporal attention.
Deep graph clustering, which aims to reveal the underlying graph structure and divide the nodes into different groups, has attracted intensive attention in recent years. However, we observe that, in the process of node encoding, existing methods suffer from representation collapse which tends to map all data into the same representation. Consequently, the discriminative capability of the node representation is limited, leading to unsatisfied clustering performance. To address this issue, we propose a novel self-supervised deep graph clustering method termed Dual Correlation Reduction Network (DCRN) by reducing information correlation in a dual manner. Specifically, in our method, we first design a siamese network to encode samples. Then by forcing the cross-view sample correlation matrix and cross-view feature correlation matrix to approximate two identity matrices, respectively, we reduce the information correlation in the dual-level, thus improving the discriminative capability of the resulting features. Moreover, in order to alleviate representation collapse caused by over-smoothing in GCN, we introduce a propagation regularization term to enable the network to gain long-distance information with the shallow network structure. Extensive experimental results on six benchmark datasets demonstrate the effectiveness of the proposed DCRN against the existing state-of-the-art methods.
Graph summarization is beneficial in a wide range of applications, such as visualization, interactive and exploratory analysis, approximate query processing, reducing the on-disk storage footprint, and graph processing in modern hardware. However, the bulk of the literature on graph summarization surprisingly overlooks the possibility of having edges of different types. In this paper, we study the novel problem of producing summaries of multi-relation networks, i.e., graphs where multiple edges of different types may exist between any pair of nodes. Multi-relation graphs are an expressive model of real-world activities, in which a relation can be a topic in social networks, an interaction type in genetic networks, or a snapshot in temporal graphs. The first approach that we consider for multi-relation graph summarization is a two-step method based on summarizing each relation in isolation, and then aggregating the resulting summaries in some clever way to produce a final unique summary. In doing this, as a side contribution, we provide the first polynomial-time approximation algorithm based on the k-Median clustering for the classic problem of lossless single-relation graph summarization. Then, we demonstrate the shortcomings of these two-step methods, and propose holistic approaches, both approximate and heuristic algorithms, to compute a summary directly for multi-relation graphs. In particular, we prove that the approximation bound of k-Median clustering for the single relation solution can be maintained in a multi-relation graph with proper aggregation operation over adjacency matrices corresponding to its multiple relations. Experimental results and case studies (on co-authorship networks and brain networks) validate the effectiveness and efficiency of the proposed algorithms.
Multi-hop logical reasoning is an established problem in the field of representation learning on knowledge graphs (KGs). It subsumes both one-hop link prediction as well as other more complex types of logical queries. Existing algorithms operate only on classical, triple-based graphs, whereas modern KGs often employ a hyper-relational modeling paradigm. In this paradigm, typed edges may have several key-value pairs known as qualifiers that provide fine-grained context for facts. In queries, this context modifies the meaning of relations, and usually reduces the answer set. Hyper-relational queries are often observed in real-world KG applications, and existing approaches for approximate query answering cannot make use of qualifier pairs. In this work, we bridge this gap and extend the multi-hop reasoning problem to hyper-relational KGs allowing to tackle this new type of complex queries. Building upon recent advancements in Graph Neural Networks and query embedding techniques, we study how to embed and answer hyper-relational conjunctive queries. Besides that, we propose a method to answer such queries and demonstrate in our experiments that qualifiers improve query answering on a diverse set of query patterns.
Clustering is one of the most fundamental and wide-spread techniques in exploratory data analysis. Yet, the basic approach to clustering has not really changed: a practitioner hand-picks a task-specific clustering loss to optimize and fit the given data to reveal the underlying cluster structure. Some types of losses---such as k-means, or its non-linear version: kernelized k-means (centroid based), and DBSCAN (density based)---are popular choices due to their good empirical performance on a range of applications. Although every so often the clustering output using these standard losses fails to reveal the underlying structure, and the practitioner has to custom-design their own variation. In this work we take an intrinsically different approach to clustering: rather than fitting a dataset to a specific clustering loss, we train a recurrent model that learns how to cluster. The model uses as training pairs examples of datasets (as input) and its corresponding cluster identities (as output). By providing multiple types of training datasets as inputs, our model has the ability to generalize well on unseen datasets (new clustering tasks). Our experiments reveal that by training on simple synthetically generated datasets or on existing real datasets, we can achieve better clustering performance on unseen real-world datasets when compared with standard benchmark clustering techniques. Our meta clustering model works well even for small datasets where the usual deep learning models tend to perform worse.
Motivation: Biomedical named entity recognition (BioNER) is the most fundamental task in biomedical text mining. State-of-the-art BioNER systems often require handcrafted features specifically designed for each type of biomedical entities. This feature generation process requires intensive labors from biomedical and linguistic experts, and makes it difficult to adapt these systems to new biomedical entity types. Although recent studies explored using neural network models for BioNER to free experts from manual feature generation, these models still require substantial human efforts to annotate massive training data. Results: We propose a multi-task learning framework for BioNER that is based on neural network models to save human efforts. We build a global model by collectively training multiple models that share parameters, each model capturing the characteristics of a different biomedical entity type. In experiments on five BioNER benchmark datasets covering four major biomedical entity types, our model outperforms state-of-the-art systems and other neural network models by a large margin, even when only limited training data are available. Further analysis shows that the large performance gains come from sharing character- and word-level information between different biomedical entities. The approach creates new opportunities for text-mining approaches to help biomedical scientists better exploit knowledge in biomedical literature.
Deep reinforcement learning (RL) methods generally engage in exploratory behavior through noise injection in the action space. An alternative is to add noise directly to the agent's parameters, which can lead to more consistent exploration and a richer set of behaviors. Methods such as evolutionary strategies use parameter perturbations, but discard all temporal structure in the process and require significantly more samples. Combining parameter noise with traditional RL methods allows to combine the best of both worlds. We demonstrate that both off- and on-policy methods benefit from this approach through experimental comparison of DQN, DDPG, and TRPO on high-dimensional discrete action environments as well as continuous control tasks. Our results show that RL with parameter noise learns more efficiently than traditional RL with action space noise and evolutionary strategies individually.
We propose a new approach to inverse reinforcement learning (IRL) based on the deep Gaussian process (deep GP) model, which is capable of learning complicated reward structures with few demonstrations. Our model stacks multiple latent GP layers to learn abstract representations of the state feature space, which is linked to the demonstrations through the Maximum Entropy learning framework. Incorporating the IRL engine into the nonlinear latent structure renders existing deep GP inference approaches intractable. To tackle this, we develop a non-standard variational approximation framework which extends previous inference schemes. This allows for approximate Bayesian treatment of the feature space and guards against overfitting. Carrying out representation and inverse reinforcement learning simultaneously within our model outperforms state-of-the-art approaches, as we demonstrate with experiments on standard benchmarks ("object world","highway driving") and a new benchmark ("binary world").
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