We investigate the fundamental limits of the recently proposed random access coverage depth problem for DNA data storage. Under this paradigm, it is assumed that the user information consists of $k$ information strands, which are encoded into $n$ strands via some generator matrix $G$. In the sequencing process, the strands are read uniformly at random, since each strand is available in a large number of copies. In this context, the random access coverage depth problem refers to the expected number of reads (i.e., sequenced strands) until it is possible to decode a specific information strand, which is requested by the user. The goal is to minimize the maximum expectation over all possible requested information strands, and this value is denoted by $T_{\max}(G)$. This paper introduces new techniques to investigate the random access coverage depth problem, which capture its combinatorial nature. We establish two general formulas to find $T_{max}(G)$ for arbitrary matrices. We introduce the concept of recovery balanced codes and combine all these results and notions to compute $T_{\max}(G)$ for MDS, simplex, and Hamming codes. We also study the performance of modified systematic MDS matrices and our results show that the best results for $T_{\max}(G)$ are achieved with a specific mix of encoded strands and replication of the information strands.
相關內容
《計算機信息》雜志發表高質量的論文，擴大了運籌學和計算的范圍，尋求有關理論、方法、實驗、系統和應用方面的原創研究論文、新穎的調查和教程論文，以及描述新的和有用的軟件工具的論文。官網鏈接： ·
損失函數（機器學習）
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模型評估
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Processing（編程語言）
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泛函
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As concerns over data privacy intensify, unlearning in Graph Neural Networks (GNNs) has emerged as a prominent research frontier in academia. This concept is pivotal in enforcing the \textit{right to be forgotten}, which entails the selective removal of specific data from trained GNNs upon user request. Our research focuses on edge unlearning, a process of particular relevance to real-world applications. Current state-of-the-art approaches like GNNDelete can eliminate the influence of specific edges yet suffer from \textit{over-forgetting}, which means the unlearning process inadvertently removes excessive information beyond needed, leading to a significant performance decline for remaining edges. Our analysis identifies the loss functions of GNNDelete as the primary source of over-forgetting and also suggests that loss functions may be redundant for effective edge unlearning. Building on these insights, we simplify GNNDelete to develop \textbf{Unlink to Unlearn} (UtU), a novel method that facilitates unlearning exclusively through unlinking the forget edges from graph structure. Our extensive experiments demonstrate that UtU delivers privacy protection on par with that of a retrained model while preserving high accuracy in downstream tasks, by upholding over 97.3\% of the retrained model's privacy protection capabilities and 99.8\% of its link prediction accuracy. Meanwhile, UtU requires only constant computational demands, underscoring its advantage as a highly lightweight and practical edge unlearning solution.
Social media users may perceive moderation decisions by the platform differently, which can lead to frustration and dropout. This study investigates users' perceived justice and fairness of online moderation decisions when they are exposed to various illegal versus legal scenarios, retributive versus restorative moderation strategies, and user-moderated versus commercially moderated platforms. We conduct an online experiment on 200 American social media users of Reddit and Twitter. Results show that retributive moderation delivers higher justice and fairness for commercially moderated than for user-moderated platforms in illegal violations; restorative moderation delivers higher fairness for legal violations than illegal ones. We discuss the opportunities for platform policymaking to improve moderation system design.
We present Tarski, a tool for specifying configurable trace semantics to facilitate automated reasoning about traces. Software development projects require that various types of traces be modeled between and within development artifacts. For any given artifact (e.g., requirements, architecture models and source code), Tarski allows the user to specify new trace types and their configurable semantics, while, using the semantics, it automatically infers new traces based on existing traces provided by the user, and checks the consistency of traces. It has been evaluated on three industrial case studies in the automotive domain (//modelwriter.github.io/Tarski/).
Data valuation is essential for quantifying data's worth, aiding in assessing data quality and determining fair compensation. While existing data valuation methods have proven effective in evaluating the value of Euclidean data, they face limitations when applied to the increasingly popular graph-structured data. Particularly, graph data valuation introduces unique challenges, primarily stemming from the intricate dependencies among nodes and the exponential growth in value estimation costs. To address the challenging problem of graph data valuation, we put forth an innovative solution, Precedence-Constrained Winter (PC-Winter) Value, to account for the complex graph structure. Furthermore, we develop a variety of strategies to address the computational challenges and enable efficient approximation of PC-Winter. Extensive experiments demonstrate the effectiveness of PC-Winter across diverse datasets and tasks.
The Pretrained Foundation Models (PFMs) are regarded as the foundation for various downstream tasks with different data modalities. A pretrained foundation model, such as BERT, GPT-3, MAE, DALLE-E, and ChatGPT, is trained on large-scale data which provides a reasonable parameter initialization for a wide range of downstream applications. The idea of pretraining behind PFMs plays an important role in the application of large models. Different from previous methods that apply convolution and recurrent modules for feature extractions, the generative pre-training (GPT) method applies Transformer as the feature extractor and is trained on large datasets with an autoregressive paradigm. Similarly, the BERT apples transformers to train on large datasets as a contextual language model. Recently, the ChatGPT shows promising success on large language models, which applies an autoregressive language model with zero shot or few show prompting. With the extraordinary success of PFMs, AI has made waves in a variety of fields over the past few years. Considerable methods, datasets, and evaluation metrics have been proposed in the literature, the need is raising for an updated survey. This study provides a comprehensive review of recent research advancements, current and future challenges, and opportunities for PFMs in text, image, graph, as well as other data modalities. We first review the basic components and existing pretraining in natural language processing, computer vision, and graph learning. We then discuss other advanced PFMs for other data modalities and unified PFMs considering the data quality and quantity. Besides, we discuss relevant research about the fundamentals of the PFM, including model efficiency and compression, security, and privacy. Finally, we lay out key implications, future research directions, challenges, and open problems.
With the extremely rapid advances in remote sensing (RS) technology, a great quantity of Earth observation (EO) data featuring considerable and complicated heterogeneity is readily available nowadays, which renders researchers an opportunity to tackle current geoscience applications in a fresh way. With the joint utilization of EO data, much research on multimodal RS data fusion has made tremendous progress in recent years, yet these developed traditional algorithms inevitably meet the performance bottleneck due to the lack of the ability to comprehensively analyse and interpret these strongly heterogeneous data. Hence, this non-negligible limitation further arouses an intense demand for an alternative tool with powerful processing competence. Deep learning (DL), as a cutting-edge technology, has witnessed remarkable breakthroughs in numerous computer vision tasks owing to its impressive ability in data representation and reconstruction. Naturally, it has been successfully applied to the field of multimodal RS data fusion, yielding great improvement compared with traditional methods. This survey aims to present a systematic overview in DL-based multimodal RS data fusion. More specifically, some essential knowledge about this topic is first given. Subsequently, a literature survey is conducted to analyse the trends of this field. Some prevalent sub-fields in the multimodal RS data fusion are then reviewed in terms of the to-be-fused data modalities, i.e., spatiospectral, spatiotemporal, light detection and ranging-optical, synthetic aperture radar-optical, and RS-Geospatial Big Data fusion. Furthermore, We collect and summarize some valuable resources for the sake of the development in multimodal RS data fusion. Finally, the remaining challenges and potential future directions are highlighted.
As an effective strategy, data augmentation (DA) alleviates data scarcity scenarios where deep learning techniques may fail. It is widely applied in computer vision then introduced to natural language processing and achieves improvements in many tasks. One of the main focuses of the DA methods is to improve the diversity of training data, thereby helping the model to better generalize to unseen testing data. In this survey, we frame DA methods into three categories based on the diversity of augmented data, including paraphrasing, noising, and sampling. Our paper sets out to analyze DA methods in detail according to the above categories. Further, we also introduce their applications in NLP tasks as well as the challenges.
Generalization to out-of-distribution (OOD) data is a capability natural to humans yet challenging for machines to reproduce. This is because most learning algorithms strongly rely on the i.i.d.~assumption on source/target data, which is often violated in practice due to domain shift. Domain generalization (DG) aims to achieve OOD generalization by using only source data for model learning. Since first introduced in 2011, research in DG has made great progresses. In particular, intensive research in this topic has led to a broad spectrum of methodologies, e.g., those based on domain alignment, meta-learning, data augmentation, or ensemble learning, just to name a few; and has covered various vision applications such as object recognition, segmentation, action recognition, and person re-identification. In this paper, for the first time a comprehensive literature review is provided to summarize the developments in DG for computer vision over the past decade. Specifically, we first cover the background by formally defining DG and relating it to other research fields like domain adaptation and transfer learning. Second, we conduct a thorough review into existing methods and present a categorization based on their methodologies and motivations. Finally, we conclude this survey with insights and discussions on future research directions.
Domain generalization (DG), i.e., out-of-distribution generalization, has attracted increased interests in recent years. Domain generalization deals with a challenging setting where one or several different but related domain(s) are given, and the goal is to learn a model that can generalize to an unseen test domain. For years, great progress has been achieved. This paper presents the first review for recent advances in domain generalization. First, we provide a formal definition of domain generalization and discuss several related fields. Next, we thoroughly review the theories related to domain generalization and carefully analyze the theory behind generalization. Then, we categorize recent algorithms into three classes and present them in detail: data manipulation, representation learning, and learning strategy, each of which contains several popular algorithms. Third, we introduce the commonly used datasets and applications. Finally, we summarize existing literature and present some potential research topics for the future.
Translational distance-based knowledge graph embedding has shown progressive improvements on the link prediction task, from TransE to the latest state-of-the-art RotatE. However, N-1, 1-N and N-N predictions still remain challenging. In this work, we propose a novel translational distance-based approach for knowledge graph link prediction. The proposed method includes two-folds, first we extend the RotatE from 2D complex domain to high dimension space with orthogonal transforms to model relations for better modeling capacity. Second, the graph context is explicitly modeled via two directed context representations. These context representations are used as part of the distance scoring function to measure the plausibility of the triples during training and inference. The proposed approach effectively improves prediction accuracy on the difficult N-1, 1-N and N-N cases for knowledge graph link prediction task. The experimental results show that it achieves better performance on two benchmark data sets compared to the baseline RotatE, especially on data set (FB15k-237) with many high in-degree connection nodes.
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