Finite Difference methods (FD) are one of the oldest and simplest methods for solving partial differential equations (PDE). Block Finite Difference methods (BFD) are FD methods in which the domain is divided into blocks, or cells, containing two or more grid points, with a different scheme used for each grid point, unlike the standard FD method. It was shown in recent works that BFD schemes might be one to three orders more accurate than their truncation errors. Due to these schemes' ability to inhibit the accumulation of truncation errors, these methods were called Error Inhibiting Schemes (EIS). This manuscript shows that our BFD schemes can be viewed as a particular type of Discontinuous Galerkin (DG) method. Then, we prove the BFD scheme's stability using the standard DG procedure while using a Fourier-like analysis to establish its optimal convergence rate. We present numerical examples in one and two dimensions to demonstrate the efficacy of these schemes.
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Pairwise difference learning (PDL) has recently been introduced as a new meta-learning technique for regression. Instead of learning a mapping from instances to outcomes in the standard way, the key idea is to learn a function that takes two instances as input and predicts the difference between the respective outcomes. Given a function of this kind, predictions for a query instance are derived from every training example and then averaged. This paper extends PDL toward the task of classification and proposes a meta-learning technique for inducing a PDL classifier by solving a suitably defined (binary) classification problem on a paired version of the original training data. We analyze the performance of the PDL classifier in a large-scale empirical study and find that it outperforms state-of-the-art methods in terms of prediction performance. Last but not least, we provide an easy-to-use and publicly available implementation of PDL in a Python package.
Inferring causal relationships as directed acyclic graphs (DAGs) is an important but challenging problem. Differentiable Causal Discovery (DCD) is a promising approach to this problem, framing the search as a continuous optimization. But existing DCD methods are numerically unstable, with poor performance beyond tens of variables. In this paper, we propose Stable Differentiable Causal Discovery (SDCD), a new method that improves previous DCD methods in two ways: (1) It employs an alternative constraint for acyclicity; this constraint is more stable, both theoretically and empirically, and fast to compute. (2) It uses a training procedure tailored for sparse causal graphs, which are common in real-world scenarios. We first derive SDCD and prove its stability and correctness. We then evaluate it with both observational and interventional data and on both small-scale and large-scale settings. We find that SDCD outperforms existing methods in both convergence speed and accuracy and can scale to thousands of variables. We provide code at //github.com/azizilab/sdcd.
Conformal Prediction (CP) algorithms estimate the uncertainty of a prediction model by calibrating its outputs on labeled data. The same calibration scheme usually applies to any model and data without modifications. The obtained prediction intervals are valid by construction but could be inefficient, i.e. unnecessarily big, if the prediction errors are not uniformly distributed over the input space. We present a general scheme to localize the intervals by training the calibration process. The standard prediction error is replaced by an optimized distance metric that depends explicitly on the object attributes. Learning the optimal metric is equivalent to training a Normalizing Flow that acts on the joint distribution of the errors and the inputs. Unlike the Error Reweighting CP algorithm of Papadopoulos et al. (2008), the framework allows estimating the gap between nominal and empirical conditional validity. The approach is compatible with existing locally-adaptive CP strategies based on re-weighting the calibration samples and applies to any point-prediction model without retraining.
Dual Coordinate Descent (DCD) and Block Dual Coordinate Descent (BDCD) are important iterative methods for solving convex optimization problems. In this work, we develop scalable DCD and BDCD methods for the kernel support vector machines (K-SVM) and kernel ridge regression (K-RR) problems. On distributed-memory parallel machines the scalability of these methods is limited by the need to communicate every iteration. On modern hardware where communication is orders of magnitude more expensive, the running time of the DCD and BDCD methods is dominated by communication cost. We address this communication bottleneck by deriving $s$-step variants of DCD and BDCD for solving the K-SVM and K-RR problems, respectively. The $s$-step variants reduce the frequency of communication by a tunable factor of $s$ at the expense of additional bandwidth and computation. The $s$-step variants compute the same solution as the existing methods in exact arithmetic. We perform numerical experiments to illustrate that the $s$-step variants are also numerically stable in finite-arithmetic, even for large values of $s$. We perform theoretical analysis to bound the computation and communication costs of the newly designed variants, up to leading order. Finally, we develop high performance implementations written in C and MPI and present scaling experiments performed on a Cray EX cluster. The new $s$-step variants achieved strong scaling speedups of up to $9.8\times$ over existing methods using up to $512$ cores.
Accurate uncertainty estimates are important in sequential model-based decision-making tasks such as Bayesian optimization. However, these estimates can be imperfect if the data violates assumptions made by the model (e.g., Gaussianity). This paper studies which uncertainties are needed in model-based decision-making and in Bayesian optimization, and argues that uncertainties can benefit from calibration -- i.e., an 80% predictive interval should contain the true outcome 80% of the time. Maintaining calibration, however, can be challenging when the data is non-stationary and depends on our actions. We propose using simple algorithms based on online learning to provably maintain calibration on non-i.i.d. data, and we show how to integrate these algorithms in Bayesian optimization with minimal overhead. Empirically, we find that calibrated Bayesian optimization converges to better optima in fewer steps, and we demonstrate improved performance on standard benchmark functions and hyperparameter optimization tasks.
Humans perceive the world by concurrently processing and fusing high-dimensional inputs from multiple modalities such as vision and audio. Machine perception models, in stark contrast, are typically modality-specific and optimised for unimodal benchmarks, and hence late-stage fusion of final representations or predictions from each modality (`late-fusion') is still a dominant paradigm for multimodal video classification. Instead, we introduce a novel transformer based architecture that uses `fusion bottlenecks' for modality fusion at multiple layers. Compared to traditional pairwise self-attention, our model forces information between different modalities to pass through a small number of bottleneck latents, requiring the model to collate and condense the most relevant information in each modality and only share what is necessary. We find that such a strategy improves fusion performance, at the same time reducing computational cost. We conduct thorough ablation studies, and achieve state-of-the-art results on multiple audio-visual classification benchmarks including Audioset, Epic-Kitchens and VGGSound. All code and models will be released.
Recent contrastive representation learning methods rely on estimating mutual information (MI) between multiple views of an underlying context. E.g., we can derive multiple views of a given image by applying data augmentation, or we can split a sequence into views comprising the past and future of some step in the sequence. Contrastive lower bounds on MI are easy to optimize, but have a strong underestimation bias when estimating large amounts of MI. We propose decomposing the full MI estimation problem into a sum of smaller estimation problems by splitting one of the views into progressively more informed subviews and by applying the chain rule on MI between the decomposed views. This expression contains a sum of unconditional and conditional MI terms, each measuring modest chunks of the total MI, which facilitates approximation via contrastive bounds. To maximize the sum, we formulate a contrastive lower bound on the conditional MI which can be approximated efficiently. We refer to our general approach as Decomposed Estimation of Mutual Information (DEMI). We show that DEMI can capture a larger amount of MI than standard non-decomposed contrastive bounds in a synthetic setting, and learns better representations in a vision domain and for dialogue generation.
Graph Neural Networks (GNNs) have proven to be useful for many different practical applications. However, many existing GNN models have implicitly assumed homophily among the nodes connected in the graph, and therefore have largely overlooked the important setting of heterophily, where most connected nodes are from different classes. In this work, we propose a novel framework called CPGNN that generalizes GNNs for graphs with either homophily or heterophily. The proposed framework incorporates an interpretable compatibility matrix for modeling the heterophily or homophily level in the graph, which can be learned in an end-to-end fashion, enabling it to go beyond the assumption of strong homophily. Theoretically, we show that replacing the compatibility matrix in our framework with the identity (which represents pure homophily) reduces to GCN. Our extensive experiments demonstrate the effectiveness of our approach in more realistic and challenging experimental settings with significantly less training data compared to previous works: CPGNN variants achieve state-of-the-art results in heterophily settings with or without contextual node features, while maintaining comparable performance in homophily settings.
Data augmentation has been widely used to improve generalizability of machine learning models. However, comparatively little work studies data augmentation for graphs. This is largely due to the complex, non-Euclidean structure of graphs, which limits possible manipulation operations. Augmentation operations commonly used in vision and language have no analogs for graphs. Our work studies graph data augmentation for graph neural networks (GNNs) in the context of improving semi-supervised node-classification. We discuss practical and theoretical motivations, considerations and strategies for graph data augmentation. Our work shows that neural edge predictors can effectively encode class-homophilic structure to promote intra-class edges and demote inter-class edges in given graph structure, and our main contribution introduces the GAug graph data augmentation framework, which leverages these insights to improve performance in GNN-based node classification via edge prediction. Extensive experiments on multiple benchmarks show that augmentation via GAug improves performance across GNN architectures and datasets.
Graph Neural Networks (GNNs) have been shown to be effective models for different predictive tasks on graph-structured data. Recent work on their expressive power has focused on isomorphism tasks and countable feature spaces. We extend this theoretical framework to include continuous features - which occur regularly in real-world input domains and within the hidden layers of GNNs - and we demonstrate the requirement for multiple aggregation functions in this context. Accordingly, we propose Principal Neighbourhood Aggregation (PNA), a novel architecture combining multiple aggregators with degree-scalers (which generalize the sum aggregator). Finally, we compare the capacity of different models to capture and exploit the graph structure via a novel benchmark containing multiple tasks taken from classical graph theory, alongside existing benchmarks from real-world domains, all of which demonstrate the strength of our model. With this work, we hope to steer some of the GNN research towards new aggregation methods which we believe are essential in the search for powerful and robust models.
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