We consider a missing data problem in the context of automatic segmentation methods for Magnetic Resonance Imaging (MRI) brain scans. Usually, automated MRI scan segmentation is based on multiple scans (e.g., T1-weighted, T2-weighted, T1CE, FLAIR). However, quite often a scan is blurry, missing or otherwise unusable. We investigate the question whether a missing scan can be synthesized. We exemplify that this is in principle possible by synthesizing a T2-weighted scan from a given T1-weighted scan. Our first aim is to compute a picture that resembles the missing scan closely, measured by average mean squared error (MSE). We develop/use several methods for this, including a random baseline approach, a clustering-based method and pixel-to-pixel translation method by (Pix2Pix) which is based on conditional GANs. The lowest MSE is achieved by our clustering-based method. Our second aim is to compare the methods with respect to the affect that using the synthesized scan has on the segmentation process. For this, we use a DeepMedic model trained with the four input scan modalities named above. We replace the T2-weighted scan by the synthesized picture and evaluate the segmentations with respect to the tumor identification, using Dice scores as numerical evaluation. The evaluation shows that the segmentation works well with synthesized scans (in particular, with Pix2Pix methods) in many cases.
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We propose Compact and Swift Segmenting 3D Gaussians(CoSSegGaussians), a method for compact 3D-consistent scene segmentation at fast rendering speed with only RGB images input. Previous NeRF-based segmentation methods have relied on time-consuming neural scene optimization. While recent 3D Gaussian Splatting has notably improved speed, existing Gaussian-based segmentation methods struggle to produce compact masks, especially in zero-shot segmentation. This issue probably stems from their straightforward assignment of learnable parameters to each Gaussian, resulting in a lack of robustness against cross-view inconsistent 2D machine-generated labels. Our method aims to address this problem by employing Dual Feature Fusion Network as Gaussians' segmentation field. Specifically, we first optimize 3D Gaussians under RGB supervision. After Gaussian Locating, DINO features extracted from images are applied through explicit unprojection, which are further incorporated with spatial features from the efficient point cloud processing network. Feature aggregation is utilized to fuse them in a global-to-local strategy for compact segmentation features. Experimental results show that our model outperforms baselines on both semantic and panoptic zero-shot segmentation task, meanwhile consumes less than 10% inference time compared to NeRF-based methods. Code and more results will be available at //David-Dou.github.io/CoSSegGaussians
Despite the utility of Large Language Models (LLMs) across a wide range of tasks and scenarios, developing a method for reliably evaluating LLMs across varied contexts continues to be challenging. Modern evaluation approaches often use LLMs to assess responses generated by LLMs. However, the meta-evaluation conducted to assess the effectiveness of these LLMs as evaluators is typically constrained by the coverage of existing benchmarks or requires extensive human annotation. This underscores the urgency of methods for scalable meta-evaluation that can effectively, reliably, and efficiently evaluate the performance of LLMs as evaluators across diverse tasks and scenarios, particularly in potentially new, user-defined scenarios. To fill this gap, we propose ScaleEval, an agent-debate-assisted meta-evaluation framework that leverages the capabilities of multiple communicative LLM agents. This framework supports multi-round discussions to assist human annotators in discerning the most capable LLMs as evaluators, which significantly eases their workload in cases that used to require large-scale annotations during meta-evaluation. We release the code for our framework, which is publicly available at: \url{//github.com/GAIR-NLP/scaleeval}.
This work aims at making a comprehensive contribution in the general area of parametric inference for discretely observed diffusion processes. Established approaches for likelihood-based estimation invoke a time-discretisation scheme for the approximation of the intractable transition dynamics of the Stochastic Differential Equation (SDE) model over finite time periods. The scheme is applied for a step-size that is either user-selected or determined by the data. Recent research has highlighted the critical ef-fect of the choice of numerical scheme on the behaviour of derived parameter estimates in the setting of hypo-elliptic SDEs. In brief, in our work, first, we develop two weak second order sampling schemes (to cover both hypo-elliptic and elliptic SDEs) and produce a small time expansion for the density of the schemes to form a proxy for the true intractable SDE transition density. Then, we establish a collection of analytic results for likelihood-based parameter estimates obtained via the formed proxies, thus providing a theoretical framework that showcases advantages from the use of the developed methodology for SDE calibration. We present numerical results from carrying out classical or Bayesian inference, for both elliptic and hypo-elliptic SDEs.
Recently, foundational models such as CLIP and SAM have shown promising performance for the task of Zero-Shot Anomaly Segmentation (ZSAS). However, either CLIP-based or SAM-based ZSAS methods still suffer from non-negligible key drawbacks: 1) CLIP primarily focuses on global feature alignment across different inputs, leading to imprecise segmentation of local anomalous parts; 2) SAM tends to generate numerous redundant masks without proper prompt constraints, resulting in complex post-processing requirements. In this work, we innovatively propose a CLIP and SAM collaboration framework called ClipSAM for ZSAS. The insight behind ClipSAM is to employ CLIP's semantic understanding capability for anomaly localization and rough segmentation, which is further used as the prompt constraints for SAM to refine the anomaly segmentation results. In details, we introduce a crucial Unified Multi-scale Cross-modal Interaction (UMCI) module for interacting language with visual features at multiple scales of CLIP to reason anomaly positions. Then, we design a novel Multi-level Mask Refinement (MMR) module, which utilizes the positional information as multi-level prompts for SAM to acquire hierarchical levels of masks and merges them. Extensive experiments validate the effectiveness of our approach, achieving the optimal segmentation performance on the MVTec-AD and VisA datasets.
Multi-modal Large Language Models (MLLMs) have shown impressive abilities in generating reasonable responses with respect to multi-modal contents. However, there is still a wide gap between the performance of recent MLLM-based applications and the expectation of the broad public, even though the most powerful OpenAI's GPT-4 and Google's Gemini have been deployed. This paper strives to enhance understanding of the gap through the lens of a qualitative study on the generalizability, trustworthiness, and causal reasoning capabilities of recent proprietary and open-source MLLMs across four modalities: ie, text, code, image, and video, ultimately aiming to improve the transparency of MLLMs. We believe these properties are several representative factors that define the reliability of MLLMs, in supporting various downstream applications. To be specific, we evaluate the closed-source GPT-4 and Gemini and 6 open-source LLMs and MLLMs. Overall we evaluate 230 manually designed cases, where the qualitative results are then summarized into 12 scores (ie, 4 modalities times 3 properties). In total, we uncover 14 empirical findings that are useful to understand the capabilities and limitations of both proprietary and open-source MLLMs, towards more reliable downstream multi-modal applications.
Although continuous advances in theoretical modelling of Molecular Communications (MC) are observed, there is still an insuperable gap between theory and experimental testbeds, especially at the microscale. In this paper, the development of the first testbed incorporating engineered yeast cells is reported. Different from the existing literature, eukaryotic yeast cells are considered for both the sender and the receiver, with {\alpha}-factor molecules facilitating the information transfer. The use of such cells is motivated mainly by the well understood biological mechanism of yeast mating, together with their genetic amenability. In addition, recent advances in yeast biosensing establish yeast as a suitable detector and a neat interface to in-body sensor networks. The system under consideration is presented first, and the mathematical models of the underlying biological processes leading to an end-to-end (E2E) system are given. The experimental setup is then described and used to obtain experimental results which validate the developed mathematical models. Beyond that, the ability of the system to effectively generate output pulses in response to repeated stimuli is demonstrated, reporting one event per two hours. However, fast RNA fluctuations indicate cell responses in less than three minutes, demonstrating the potential for much higher rates in the future.
As an indispensable personalized service within Location-Based Social Networks (LBSNs), the Point-of-Interest (POI) recommendation aims to assist individuals in discovering attractive and engaging places. However, the accurate recommendation capability relies on the powerful server collecting a vast amount of users' historical check-in data, posing significant risks of privacy breaches. Although several collaborative learning (CL) frameworks for POI recommendation enhance recommendation resilience and allow users to keep personal data on-device, they still share personal knowledge to improve recommendation performance, thus leaving vulnerabilities for potential attackers. Given this, we design a new Physical Trajectory Inference Attack (PTIA) to expose users' historical trajectories. Specifically, for each user, we identify the set of interacted POIs by analyzing the aggregated information from the target POIs and their correlated POIs. We evaluate the effectiveness of PTIA on two real-world datasets across two types of decentralized CL frameworks for POI recommendation. Empirical results demonstrate that PTIA poses a significant threat to users' historical trajectories. Furthermore, Local Differential Privacy (LDP), the traditional privacy-preserving method for CL frameworks, has also been proven ineffective against PTIA. In light of this, we propose a novel defense mechanism (AGD) against PTIA based on an adversarial game to eliminate sensitive POIs and their information in correlated POIs. After conducting intensive experiments, AGD has been proven precise and practical, with minimal impact on recommendation performance.
Modern data mining applications require to perform incremental clustering over dynamic datasets by tracing temporal changes over the resulting clusters. In this paper, we propose A-Posteriori affinity Propagation (APP), an incremental extension of Affinity Propagation (AP) based on cluster consolidation and cluster stratification to achieve faithfulness and forgetfulness. APP enforces incremental clustering where i) new arriving objects are dynamically consolidated into previous clusters without the need to re-execute clustering over the entire dataset of objects, and ii) a faithful sequence of clustering results is produced and maintained over time, while allowing to forget obsolete clusters with decremental learning functionalities. Four popular labeled datasets are used to test the performance of APP with respect to benchmark clustering performances obtained by conventional AP and Incremental Affinity Propagation based on Nearest neighbor Assignment (IAPNA) algorithms. Experimental results show that APP achieves comparable clustering performance while enforcing scalability at the same time.
The recent proliferation of knowledge graphs (KGs) coupled with incomplete or partial information, in the form of missing relations (links) between entities, has fueled a lot of research on knowledge base completion (also known as relation prediction). Several recent works suggest that convolutional neural network (CNN) based models generate richer and more expressive feature embeddings and hence also perform well on relation prediction. However, we observe that these KG embeddings treat triples independently and thus fail to cover the complex and hidden information that is inherently implicit in the local neighborhood surrounding a triple. To this effect, our paper proposes a novel attention based feature embedding that captures both entity and relation features in any given entity's neighborhood. Additionally, we also encapsulate relation clusters and multihop relations in our model. Our empirical study offers insights into the efficacy of our attention based model and we show marked performance gains in comparison to state of the art methods on all datasets.
Within the rapidly developing Internet of Things (IoT), numerous and diverse physical devices, Edge devices, Cloud infrastructure, and their quality of service requirements (QoS), need to be represented within a unified specification in order to enable rapid IoT application development, monitoring, and dynamic reconfiguration. But heterogeneities among different configuration knowledge representation models pose limitations for acquisition, discovery and curation of configuration knowledge for coordinated IoT applications. This paper proposes a unified data model to represent IoT resource configuration knowledge artifacts. It also proposes IoT-CANE (Context-Aware recommendatioN systEm) to facilitate incremental knowledge acquisition and declarative context driven knowledge recommendation.
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