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In this paper, we propose hybrid data-driven ROM closures for fluid flows. These new ROM closures combine two fundamentally different strategies: (i) purely data-driven ROM closures, both for the velocity and the pressure; and (ii) physically based, eddy viscosity data-driven closures, which model the energy transfer in the system. The first strategy consists in the addition of closure/correction terms to the governing equations, which are built from the available data. The second strategy includes turbulence modeling by adding eddy viscosity terms, which are determined by using machine learning techniques. The two strategies are combined for the first time in this paper to investigate a two-dimensional flow past a circular cylinder at Re=50000. Our numerical results show that the hybrid data-driven ROM is more accurate than both the purely data-driven ROM and the eddy viscosity ROM.

Since 2016, sharding has become an auspicious solution to tackle the scalability issue in legacy blockchain systems. Despite its potential to strongly boost the blockchain throughput, sharding comes with its own security issues. To ease the process of deciding which shard to place transactions, existing sharding protocols use a hash-based transaction sharding in which the hash value of a transaction determines its output shard. Unfortunately, we show that this mechanism opens up a loophole that could be exploited to conduct a single-shard flooding attack, a type of Denial-of-Service (DoS) attack, to overwhelm a single shard that ends up reducing the performance of the system as a whole. To counter the single-shard flooding attack, we propose a countermeasure that essentially eliminates the loophole by rejecting the use of hash-based transaction sharding. The countermeasure leverages the Trusted Execution Environment (TEE) to let blockchain's validators securely execute a transaction sharding algorithm with a negligible overhead. We provide a formal specification for the countermeasure and analyze its security properties in the Universal Composability (UC) framework. Finally, a proof-of-concept is developed to demonstrate the feasibility and practicality of our solution.

Biomedical image analysis algorithm validation depends on high-quality annotation of reference datasets, for which labeling instructions are key. Despite their importance, their optimization remains largely unexplored. Here, we present the first systematic study of labeling instructions and their impact on annotation quality in the field. Through comprehensive examination of professional practice and international competitions registered at the MICCAI Society, we uncovered a discrepancy between annotators' needs for labeling instructions and their current quality and availability. Based on an analysis of 14,040 images annotated by 156 annotators from four professional companies and 708 Amazon Mechanical Turk (MTurk) crowdworkers using instructions with different information density levels, we further found that including exemplary images significantly boosts annotation performance compared to text-only descriptions, while solely extending text descriptions does not. Finally, professional annotators constantly outperform MTurk crowdworkers. Our study raises awareness for the need of quality standards in biomedical image analysis labeling instructions.

Purpose of Review: Negative controls are a powerful tool to detect and adjust for bias in epidemiological research. This paper introduces negative controls to a broader audience and provides guidance on principled design and causal analysis based on a formal negative control framework. Recent Findings: We review and summarize causal and statistical assumptions, practical strategies, and validation criteria that can be combined with subject matter knowledge to perform negative control analyses. We also review existing statistical methodologies for detection, reduction, and correction of confounding bias, and briefly discuss recent advances towards nonparametric identification of causal effects in a double negative control design. Summary: There is great potential for valid and accurate causal inference leveraging contemporary healthcare data in which negative controls are routinely available. Design and analysis of observational data leveraging negative controls is an area of growing interest in health and social sciences. Despite these developments, further effort is needed to disseminate these novel methods to ensure they are adopted by practicing epidemiologists.

In this work, we consider the task of improving the accuracy of dynamic models for model predictive control (MPC) in an online setting. Even though prediction models can be learned and applied to model-based controllers, these models are often learned offline. In this offline setting, training data is first collected and a prediction model is learned through an elaborated training procedure. After the model is trained to a desired accuracy, it is then deployed in a model predictive controller. However, since the model is learned offline, it does not adapt to disturbances or model errors observed during deployment. To improve the adaptiveness of the model and the controller, we propose an online dynamics learning framework that continually improves the accuracy of the dynamic model during deployment. We adopt knowledge-based neural ordinary differential equations (KNODE) as the dynamic models, and use techniques inspired by transfer learning to continually improve the model accuracy. We demonstrate the efficacy of our framework with a quadrotor robot, and verify the framework in both simulations and physical experiments. Results show that the proposed approach is able to account for disturbances that are possibly time-varying, while maintaining good trajectory tracking performance.

Properly handling missing data is a fundamental challenge in recommendation. Most present works perform negative sampling from unobserved data to supply the training of recommender models with negative signals. Nevertheless, existing negative sampling strategies, either static or adaptive ones, are insufficient to yield high-quality negative samples --- both informative to model training and reflective of user real needs. In this work, we hypothesize that item knowledge graph (KG), which provides rich relations among items and KG entities, could be useful to infer informative and factual negative samples. Towards this end, we develop a new negative sampling model, Knowledge Graph Policy Network (KGPolicy), which works as a reinforcement learning agent to explore high-quality negatives. Specifically, by conducting our designed exploration operations, it navigates from the target positive interaction, adaptively receives knowledge-aware negative signals, and ultimately yields a potential negative item to train the recommender. We tested on a matrix factorization (MF) model equipped with KGPolicy, and it achieves significant improvements over both state-of-the-art sampling methods like DNS and IRGAN, and KG-enhanced recommender models like KGAT. Further analyses from different angles provide insights of knowledge-aware sampling. We release the codes and datasets at //github.com/xiangwang1223/kgpolicy.

Breast cancer remains a global challenge, causing over 1 million deaths globally in 2018. To achieve earlier breast cancer detection, screening x-ray mammography is recommended by health organizations worldwide and has been estimated to decrease breast cancer mortality by 20-40%. Nevertheless, significant false positive and false negative rates, as well as high interpretation costs, leave opportunities for improving quality and access. To address these limitations, there has been much recent interest in applying deep learning to mammography; however, obtaining large amounts of annotated data poses a challenge for training deep learning models for this purpose, as does ensuring generalization beyond the populations represented in the training dataset. Here, we present an annotation-efficient deep learning approach that 1) achieves state-of-the-art performance in mammogram classification, 2) successfully extends to digital breast tomosynthesis (DBT; "3D mammography"), 3) detects cancers in clinically-negative prior mammograms of cancer patients, 4) generalizes well to a population with low screening rates, and 5) outperforms five-out-of-five full-time breast imaging specialists by improving absolute sensitivity by an average of 14%. Our results demonstrate promise towards software that can improve the accuracy of and access to screening mammography worldwide.

In this paper, we adopt 3D Convolutional Neural Networks to segment volumetric medical images. Although deep neural networks have been proven to be very effective on many 2D vision tasks, it is still challenging to apply them to 3D tasks due to the limited amount of annotated 3D data and limited computational resources. We propose a novel 3D-based coarse-to-fine framework to effectively and efficiently tackle these challenges. The proposed 3D-based framework outperforms the 2D counterpart to a large margin since it can leverage the rich spatial infor- mation along all three axes. We conduct experiments on two datasets which include healthy and pathological pancreases respectively, and achieve the current state-of-the-art in terms of Dice-S{\o}rensen Coefficient (DSC). On the NIH pancreas segmentation dataset, we outperform the previous best by an average of over 2%, and the worst case is improved by 7% to reach almost 70%, which indicates the reliability of our framework in clinical applications.

We propose a new method for event extraction (EE) task based on an imitation learning framework, specifically, inverse reinforcement learning (IRL) via generative adversarial network (GAN). The GAN estimates proper rewards according to the difference between the actions committed by the expert (or ground truth) and the agent among complicated states in the environment. EE task benefits from these dynamic rewards because instances and labels yield to various extents of difficulty and the gains are expected to be diverse -- e.g., an ambiguous but correctly detected trigger or argument should receive high gains -- while the traditional RL models usually neglect such differences and pay equal attention on all instances. Moreover, our experiments also demonstrate that the proposed framework outperforms state-of-the-art methods, without explicit feature engineering.