The California Innocence Project (CIP), a clinical law school program aiming to free wrongfully convicted prisoners, evaluates thousands of mails containing new requests for assistance and corresponding case files. Processing and interpreting this large amount of information presents a significant challenge for CIP officials, which can be successfully aided by topic modeling techniques.In this paper, we apply Non-negative Matrix Factorization (NMF) method and implement various offshoots of it to the important and previously unstudied data set compiled by CIP. We identify underlying topics of existing case files and classify request files by crime type and case status (decision type). The results uncover the semantic structure of current case files and can provide CIP officials with a general understanding of newly received case files before further examinations. We also provide an exposition of popular variants of NMF with their experimental results and discuss the benefits and drawbacks of each variant through the real-world application.
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A large number of survey papers are being published in blockchain since the first survey appeared in 2017. A person entering into the field of blockchain is faced with the issue of which blockchain surveys to read and why? Who is publishing these surveys and what is the nature of these surveys? Which of the publishers are publishing more such surveys and what are the lengths of the published surveys? Which kind of survey is getting more citations? Which of the authors is collaborating on such surveys? etc. All these questions motivated us to analyze the trends in publishing blockchain surveys. In this paper, we have performed a bibliometric analysis on $801$ surveys or review papers published in the field of blockchain in the last approximately five years. We have analyzed the papers with respect to the publication type, publishers and venue, references, citations, paper length, different categories, year, countries, authors, and their collaborations and found interesting insights. To the best of our knowledge, this study is the first of its kind and hope to provide better understanding of the field.
Hottopixx, proposed by Bittorf et al. at NIPS 2012, is an algorithm for solving nonnegative matrix factorization (NMF) problems under the separability assumption. Separable NMFs have important applications, such as topic extraction from documents and unmixing of hyperspectral images. In such applications, the robustness of the algorithm to noise is the key to the success. Hottopixx has been shown to be robust to noise, and its robustness can be further enhanced through postprocessing. However, there is a drawback. Hottopixx and its postprocessing require us to estimate the noise level involved in the matrix we want to factorize before running, since they use it as part of the input data. The noise-level estimation is not an easy task. In this paper, we overcome this drawback. We present a refinement of Hottopixx and its postprocessing that runs without prior knowledge of the noise level. We show that the refinement has almost the same robustness to noise as the original algorithm.
The best evidence concerning comparative treatment effectiveness comes from clinical trials, the results of which are reported in unstructured articles. Medical experts must manually extract information from articles to inform decision-making, which is time-consuming and expensive. Here we consider the end-to-end task of both (a) extracting treatments and outcomes from full-text articles describing clinical trials (entity identification) and, (b) inferring the reported results for the former with respect to the latter (relation extraction). We introduce new data for this task, and evaluate models that have recently achieved state-of-the-art results on similar tasks in Natural Language Processing. We then propose a new method motivated by how trial results are typically presented that outperforms these purely data-driven baselines. Finally, we run a fielded evaluation of the model with a non-profit seeking to identify existing drugs that might be re-purposed for cancer, showing the potential utility of end-to-end evidence extraction systems.
Sparse PCA is the optimization problem obtained from PCA by adding a sparsity constraint on the principal components. Sparse PCA is NP-hard and hard to approximate even in the single-component case. In this paper we settle the computational complexity of sparse PCA with respect to the rank of the covariance matrix. We show that, if the rank of the covariance matrix is a fixed value, then there is an algorithm that solves sparse PCA to global optimality, whose running time is polynomial in the number of features. We also prove a similar result for the version of sparse PCA which requires the principal components to have disjoint supports.
Automated generation and (user) authoring of the realistic virtual terrain is most sought for by the multimedia applications like VR models and gaming. The most common representation adopted for terrain is Digital Elevation Model (DEM). Existing terrain authoring and modeling techniques have addressed some of these and can be broadly categorized as: procedural modeling, simulation method, and example-based methods. In this paper, we propose a novel realistic terrain authoring framework powered by a combination of VAE and generative conditional GAN model. Our framework is an example-based method that attempts to overcome the limitations of existing methods by learning a latent space from a real-world terrain dataset. This latent space allows us to generate multiple variants of terrain from a single input as well as interpolate between terrains while keeping the generated terrains close to real-world data distribution. We also developed an interactive tool, that lets the user generate diverse terrains with minimalist inputs. We perform thorough qualitative and quantitative analysis and provide comparisons with other SOTA methods. We intend to release our code/tool to the academic community.
In this paper, we show that the diagonal of a high-dimensional sample covariance matrix stemming from $n$ independent observations of a $p$-dimensional time series with finite fourth moments can be approximated in spectral norm by the diagonal of the population covariance matrix. We assume that $n,p\to \infty$ with $p/n$ tending to a constant which might be positive or zero. As applications, we provide an approximation of the sample correlation matrix ${\mathbf R}$ and derive a variety of results for its eigenvalues. We identify the limiting spectral distribution of ${\mathbf R}$ and construct an estimator for the population correlation matrix and its eigenvalues. Finally, the almost sure limits of the extreme eigenvalues of ${\mathbf R}$ in a generalized spiked correlation model are analyzed.
In 1954, Alston S. Householder published Principles of Numerical Analysis, one of the first modern treatments on matrix decomposition that favored a (block) LU decomposition-the factorization of a matrix into the product of lower and upper triangular matrices. And now, matrix decomposition has become a core technology in machine learning, largely due to the development of the back propagation algorithm in fitting a neural network. The sole aim of this survey is to give a self-contained introduction to concepts and mathematical tools in numerical linear algebra and matrix analysis in order to seamlessly introduce matrix decomposition techniques and their applications in subsequent sections. However, we clearly realize our inability to cover all the useful and interesting results concerning matrix decomposition and given the paucity of scope to present this discussion, e.g., the separated analysis of the Euclidean space, Hermitian space, Hilbert space, and things in the complex domain. We refer the reader to literature in the field of linear algebra for a more detailed introduction to the related fields.
Although Recommender Systems have been comprehensively studied in the past decade both in industry and academia, most of current recommender systems suffer from the fol- lowing issues: 1) The data sparsity of the user-item matrix seriously affect the recommender system quality. As a result, most of traditional recommender system approaches are not able to deal with the users who have rated few items, which is known as cold start problem in recommender system. 2) Traditional recommender systems assume that users are in- dependently and identically distributed and ignore the social relation between users. However, in real life scenario, due to the exponential growth of social networking service, such as facebook and Twitter, social connections between different users play an significant role for recommender system task. In this work, aiming at providing a better recommender sys- tems by incorporating user social network information, we propose a matrix factorization framework with user social connection constraints. Experimental results on the real-life dataset shows that the proposed method performs signifi- cantly better than the state-of-the-art approaches in terms of MAE and RMSE, especially for the cold start users.
We introduce negative binomial matrix factorization (NBMF), a matrix factorization technique specially designed for analyzing over-dispersed count data. It can be viewed as an extension of Poisson matrix factorization (PF) perturbed by a multiplicative term which models exposure. This term brings a degree of freedom for controlling the dispersion, making NBMF more robust to outliers. We show that NBMF allows to skip traditional pre-processing stages, such as binarization, which lead to loss of information. Two estimation approaches are presented: maximum likelihood and variational Bayes inference. We test our model with a recommendation task and show its ability to predict user tastes with better precision than PF.
Since the invention of word2vec, the skip-gram model has significantly advanced the research of network embedding, such as the recent emergence of the DeepWalk, LINE, PTE, and node2vec approaches. In this work, we show that all of the aforementioned models with negative sampling can be unified into the matrix factorization framework with closed forms. Our analysis and proofs reveal that: (1) DeepWalk empirically produces a low-rank transformation of a network's normalized Laplacian matrix; (2) LINE, in theory, is a special case of DeepWalk when the size of vertices' context is set to one; (3) As an extension of LINE, PTE can be viewed as the joint factorization of multiple networks' Laplacians; (4) node2vec is factorizing a matrix related to the stationary distribution and transition probability tensor of a 2nd-order random walk. We further provide the theoretical connections between skip-gram based network embedding algorithms and the theory of graph Laplacian. Finally, we present the NetMF method as well as its approximation algorithm for computing network embedding. Our method offers significant improvements over DeepWalk and LINE for conventional network mining tasks. This work lays the theoretical foundation for skip-gram based network embedding methods, leading to a better understanding of latent network representation learning.
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