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Temporal irreversibility, often referred to as the arrow of time, is a fundamental concept in statistical mechanics. Markers of irreversibility also provide a powerful characterisation of information processing in biological systems. However, current approaches tend to describe temporal irreversibility in terms of a single scalar quantity, without disentangling the underlying dynamics that contribute to irreversibility. Here we propose a broadly applicable information-theoretic framework to characterise the arrow of time in multivariate time series, which yields qualitatively different types of irreversible information dynamics. This multidimensional characterisation reveals previously unreported high-order modes of irreversibility, and establishes a formal connection between recent heuristic markers of temporal irreversibility and metrics of information processing. We demonstrate the prevalence of high-order irreversibility in the hyperactive regime of a biophysical model of brain dynamics, showing that our framework is both theoretically principled and empirically useful. This work challenges the view of the arrow of time as a monolithic entity, enhancing both our theoretical understanding of irreversibility and our ability to detect it in practical applications.

We describe a novel algorithm for solving general parametric (nonlinear) eigenvalue problems. Our method has two steps: first, high-accuracy solutions of non-parametric versions of the problem are gathered at some values of the parameters; these are then combined to obtain global approximations of the parametric eigenvalues. To gather the non-parametric data, we use non-intrusive contour-integration-based methods, which, however, cannot track eigenvalues that migrate into/out of the contour as the parameter changes. Special strategies are described for performing the combination-over-parameter step despite having only partial information on such "migrating" eigenvalues. Moreover, we dedicate a special focus to the approximation of eigenvalues that undergo bifurcations. Finally, we propose an adaptive strategy that allows one to effectively apply our method even without any a priori information on the behavior of the sought-after eigenvalues. Numerical tests are performed, showing that our algorithm can achieve remarkably high approximation accuracy.

By combining a logarithm transformation with a corrected Milstein-type method, the present article proposes an explicit, unconditional boundary and dynamics preserving scheme for the stochastic susceptible-infected-susceptible (SIS) epidemic model that takes value in (0,N). The scheme applied to the model is first proved to have a strong convergence rate of order one. Further, the dynamic behaviors are analyzed for the numerical approximations and it is shown that the scheme can unconditionally preserve both the domain and the dynamics of the model. More precisely, the proposed scheme gives numerical approximations living in the domain (0,N) and reproducing the extinction and persistence properties of the original model for any time discretization step-size h > 0, without any additional requirements on the model parameters. Numerical experiments are presented to verify our theoretical results.

This study performs an ablation analysis of Vector Quantized Generative Adversarial Networks (VQGANs), concentrating on image-to-image synthesis utilizing a single NVIDIA A100 GPU. The current work explores the nuanced effects of varying critical parameters including the number of epochs, image count, and attributes of codebook vectors and latent dimensions, specifically within the constraint of limited resources. Notably, our focus is pinpointed on the vector quantization loss, keeping other hyperparameters and loss components (GAN loss) fixed. This was done to delve into a deeper understanding of the discrete latent space, and to explore how varying its size affects the reconstruction. Though, our results do not surpass the existing benchmarks, however, our findings shed significant light on VQGAN's behaviour for a smaller dataset, particularly concerning artifacts, codebook size optimization, and comparative analysis with Principal Component Analysis (PCA). The study also uncovers the promising direction by introducing 2D positional encodings, revealing a marked reduction in artifacts and insights into balancing clarity and overfitting.

A variant of the standard notion of branching bisimilarity for processes with discrete relative timing is proposed which is coarser than the standard notion. Using a version of ACP (Algebra of Communicating Processes) with abstraction for processes with discrete relative timing, it is shown that the proposed variant allows of both the functional correctness and the performance properties of the PAR (Positive Acknowledgement with Retransmission) protocol to be analyzed. In the version of ACP concerned, the difference between the standard notion of branching bisimilarity and its proposed variant is characterized by a single axiom schema.

This article re-examines Lawvere's abstract, category-theoretic proof of the fixed-point theorem whose contrapositive is a `universal' diagonal argument. The main result is that the necessary axioms for both the fixed-point theorem and the diagonal argument can be stripped back further, to a semantic analogue of a weak substructural logic lacking weakening or exchange.

Compared to widely used likelihood-based approaches, the minimum contrast (MC) method is a computationally efficient method for estimation and inference of parametric stationary point processes. This advantage becomes more pronounced when analyzing complex point process models, such as multivariate log-Gaussian Cox processes (LGCP). Despite its practical advantages, there is very little work on the MC method for multivariate point processes. The aim of this article is to introduce a new MC method for parametric multivariate stationary spatial point processes. A contrast function is calculated based on the trace of the power of the difference between the conjectured $K$-function matrix and its nonparametric unbiased edge-corrected estimator. Under standard assumptions, the asymptotic normality of the MC estimator of the model parameters is derived. The performance of the proposed method is illustrated with bivariate LGCP simulations and a real data analysis of a bivariate point pattern of the 2014 terrorist attacks in Nigeria.

Stochastic inversion problems are typically encountered when it is wanted to quantify the uncertainty affecting the inputs of computer models. They consist in estimating input distributions from noisy, observable outputs, and such problems are increasingly examined in Bayesian contexts where the targeted inputs are affected by stochastic uncertainties. In this regard, a stochastic input can be qualified as meaningful if it explains most of the output uncertainty. While such inverse problems are characterized by identifiability conditions, constraints of "signal to noise", that can formalize this meaningfulness, should be accounted for within the definition of the model, prior to inference. This article investigates the possibility of forcing a solution to be meaningful in the context of parametric uncertainty quantification, through the tools of global sensitivity analysis and information theory (variance, entropy, Fisher information). Such forcings have mainly the nature of constraints placed on the input covariance, and can be made explicit by considering linear or linearizable models. Simulated experiments indicate that, when injected into the modeling process, these constraints can limit the influence of measurement or process noise on the estimation of the input distribution, and let hope for future extensions in a full non-linear framework, for example through the use of linear Gaussian mixtures.

The main computational cost per iteration of adaptive cubic regularization methods for solving large-scale nonconvex problems is the computation of the step $s_k$, which requires an approximate minimizer of the cubic model. We propose a new approach in which this minimizer is sought in a low dimensional subspace that, in contrast to classical approaches, is reused for a number of iterations. A regularized Newton step to correct $s_k$ is also incorporated whenever needed. We show that our method increases efficiency while preserving the worst-case complexity of classical cubic regularized methods. We also explore the use of rational Krylov subspaces for the subspace minimization, to overcome some of the issues encountered when using polynomial Krylov subspaces. We provide several experimental results illustrating the gains of the new approach when compared to classic implementations.

Sparse principal component analysis (SPCA) is a popular tool for dimensionality reduction in high-dimensional data. However, there is still a lack of theoretically justified Bayesian SPCA methods that can scale well computationally. One of the major challenges in Bayesian SPCA is selecting an appropriate prior for the loadings matrix, considering that principal components are mutually orthogonal. We propose a novel parameter-expanded coordinate ascent variational inference (PX-CAVI) algorithm. This algorithm utilizes a spike and slab prior, which incorporates parameter expansion to cope with the orthogonality constraint. Besides comparing to two popular SPCA approaches, we introduce the PX-EM algorithm as an EM analogue to the PX-CAVI algorithm for comparison. Through extensive numerical simulations, we demonstrate that the PX-CAVI algorithm outperforms these SPCA approaches, showcasing its superiority in terms of performance. We study the posterior contraction rate of the variational posterior, providing a novel contribution to the existing literature. The PX-CAVI algorithm is then applied to study a lung cancer gene expression dataset. The R package VBsparsePCA with an implementation of the algorithm is available on the Comprehensive R Archive Network (CRAN).