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Neural Cellular Automata (NCAs) are a model of morphogenesis, capable of growing two-dimensional artificial organisms from a single seed cell. In this paper, we show that NCAs can be trained to respond to signals. Two types of signal are used: internal (genomically-coded) signals, and external (environmental) signals. Signals are presented to a single pixel for a single timestep. Results show NCAs are able to grow into multiple distinct forms based on internal signals, and are able to change colour based on external signals. Overall these contribute to the development of NCAs as a model of artificial morphogenesis, and pave the way for future developments embedding dynamic behaviour into the NCA model. Code and target images are available through GitHub: //github.com/jstovold/ALIFE2023

Metaphors are considered to pose challenges for a wide spectrum of NLP tasks. This gives rise to the area of computational metaphor processing. However, it remains unclear what types of metaphors challenge current state-of-the-art models. In this paper, we test various NLP models on the VUA metaphor dataset and quantify to what extent metaphors affect models' performance on various downstream tasks. Analysis reveals that VUA includes a large number of metaphors that pose little difficulty to downstream tasks. We would like to shift the attention of researchers away from these metaphors to instead focus on challenging metaphors. To identify hard metaphors, we propose an automatic pipeline that identifies metaphors that challenge a particular model. Our analysis demonstrates that our detected hard metaphors contrast significantly with VUA and reduce the accuracy of machine translation by 16\%, QA performance by 4\%, NLI by 7\%, and metaphor identification recall by over 14\% for various popular NLP systems.

Temporal graphs are a popular modelling mechanism for dynamic complex systems that extend ordinary graphs with discrete time. Simply put, time progresses one unit per step and the availability of edges can change with time. We consider the complexity of solving $\omega$-regular games played on temporal graphs where the edge availability is ultimately periodic and fixed a priori. We show that solving parity games on temporal graphs is decidable in PSPACE, only assuming the edge predicate itself is in PSPACE. A matching lower bound already holds for what we call punctual reachability games on static graphs, where one player wants to reach the target at a given, binary encoded, point in time. We further study syntactic restrictions that imply more efficient procedures. In particular, if the edge predicate is in $P$ and is monotonically increasing for one player and decreasing for the other, then the complexity of solving games is only polynomially increased compared to static graphs.

This tutorial aims to provide an intuitive introduction to Gaussian process regression (GPR). GPR models have been widely used in machine learning applications due to their representation flexibility and inherent capability to quantify uncertainty over predictions. The tutorial starts with explaining the basic concepts that a Gaussian process is built on, including multivariate normal distribution, kernels, non-parametric models, and joint and conditional probability. It then provides a concise description of GPR and an implementation of a standard GPR algorithm. In addition, the tutorial reviews packages for implementing state-of-the-art Gaussian process algorithms. This tutorial is accessible to a broad audience, including those new to machine learning, ensuring a clear understanding of GPR fundamentals.

Although continuous advances in theoretical modelling of Molecular Communications (MC) are observed, there is still an insuperable gap between theory and experimental testbeds, especially at the microscale. In this paper, the development of the first testbed incorporating engineered yeast cells is reported. Different from the existing literature, eukaryotic yeast cells are considered for both the sender and the receiver, with {\alpha}-factor molecules facilitating the information transfer. The use of such cells is motivated mainly by the well understood biological mechanism of yeast mating, together with their genetic amenability. In addition, recent advances in yeast biosensing establish yeast as a suitable detector and a neat interface to in-body sensor networks. The system under consideration is presented first, and the mathematical models of the underlying biological processes leading to an end-to-end (E2E) system are given. The experimental setup is then described and used to obtain experimental results which validate the developed mathematical models. Beyond that, the ability of the system to effectively generate output pulses in response to repeated stimuli is demonstrated, reporting one event per two hours. However, fast RNA fluctuations indicate cell responses in less than three minutes, demonstrating the potential for much higher rates in the future.

Accurately predicting the onset of specific activities within defined timeframes holds significant importance in several applied contexts. In particular, accurate prediction of the number of future users that will be exposed to an intervention is an important piece of information for experimenters running online experiments (A/B tests). In this work, we propose a novel approach to predict the number of users that will be active in a given time period, as well as the temporal trajectory needed to attain a desired user participation threshold. We model user activity using a Bayesian nonparametric approach which allows us to capture the underlying heterogeneity in user engagement. We derive closed-form expressions for the number of new users expected in a given period, and a simple Monte Carlo algorithm targeting the posterior distribution of the number of days needed to attain a desired number of users; the latter is important for experimental planning. We illustrate the performance of our approach via several experiments on synthetic and real world data, in which we show that our novel method outperforms existing competitors.

Consistency is a key requirement of high-quality translation. It is especially important to adhere to pre-approved terminology and adapt to corrected translations in domain-specific projects. Machine translation (MT) has achieved significant progress in the area of domain adaptation. However, in-domain data scarcity is common in translation settings, due to the lack of specialised datasets and terminology, or inconsistency and inaccuracy of available in-domain translations. In such scenarios where there is insufficient in-domain data to fine-tune MT models, producing translations that are consistent with the relevant context is challenging. While real-time adaptation can make use of smaller amounts of in-domain data to improve the translation on the fly, it remains challenging due to supported context limitations and efficiency constraints. Large language models (LLMs) have recently shown interesting capabilities of in-context learning, where they learn to replicate certain input-output text generation patterns, without further fine-tuning. Such capabilities have opened new horizons for domain-specific data augmentation and real-time adaptive MT. This work attempts to address two main relevant questions: 1) in scenarios involving human interaction and continuous feedback, can we employ language models to improve the quality of adaptive MT at inference time? and 2) in the absence of sufficient in-domain data, can we use pre-trained large-scale language models to improve the process of MT domain adaptation?

This manuscript portrays optimization as a process. In many practical applications the environment is so complex that it is infeasible to lay out a comprehensive theoretical model and use classical algorithmic theory and mathematical optimization. It is necessary as well as beneficial to take a robust approach, by applying an optimization method that learns as one goes along, learning from experience as more aspects of the problem are observed. This view of optimization as a process has become prominent in varied fields and has led to some spectacular success in modeling and systems that are now part of our daily lives.

Graph Neural Networks (GNNs) have recently been used for node and graph classification tasks with great success, but GNNs model dependencies among the attributes of nearby neighboring nodes rather than dependencies among observed node labels. In this work, we consider the task of inductive node classification using GNNs in supervised and semi-supervised settings, with the goal of incorporating label dependencies. Because current GNNs are not universal (i.e., most-expressive) graph representations, we propose a general collective learning approach to increase the representation power of any existing GNN. Our framework combines ideas from collective classification with self-supervised learning, and uses a Monte Carlo approach to sampling embeddings for inductive learning across graphs. We evaluate performance on five real-world network datasets and demonstrate consistent, significant improvement in node classification accuracy, for a variety of state-of-the-art GNNs.

The present paper surveys neural approaches to conversational AI that have been developed in the last few years. We group conversational systems into three categories: (1) question answering agents, (2) task-oriented dialogue agents, and (3) chatbots. For each category, we present a review of state-of-the-art neural approaches, draw the connection between them and traditional approaches, and discuss the progress that has been made and challenges still being faced, using specific systems and models as case studies.