Backdoor adjustment is a technique in causal inference for estimating interventional quantities from purely observational data. For example, in medical settings, backdoor adjustment can be used to control for confounding and estimate the effectiveness of a treatment. However, high dimensional treatments and confounders pose a series of potential pitfalls: tractability, identifiability, optimization. In this work, we take a generative modeling approach to backdoor adjustment for high dimensional treatments and confounders. We cast backdoor adjustment as an optimization problem in variational inference without reliance on proxy variables and hidden confounders. Empirically, our method is able to estimate interventional likelihood in a variety of high dimensional settings, including semi-synthetic X-ray medical data. To the best of our knowledge, this is the first application of backdoor adjustment in which all the relevant variables are high dimensional.
Optimal transportation is a fundamental topic that has attracted a great amount of attention from machine learning community in the past decades. In this paper, we consider an interesting discrete dynamic optimal transport problem: can we efficiently update the optimal transport plan when the weights or the locations of the data points change? This problem is naturally motivated by several applications in machine learning. For example, we often need to compute the optimal transportation cost between two different data sets; if some change happens to a few data points, should we re-compute the high complexity cost function or update the cost by some efficient dynamic data structure? We are aware that several dynamic maximum flow algorithms have been proposed before, however, the research on dynamic minimum cost flow problem is still quite limited, to the best of our knowledge. We propose a novel 2D Skip Orthogonal List together with some dynamic tree techniques. Although our algorithm is based on the conventional simplex method, it can efficiently complete each pivoting operation within $O(|V|)$ time with high probability where $V$ is the set of all supply and demand nodes. Since dynamic modifications typically do not introduce significant changes, our algorithm requires only a few simplex iterations in practice. So our algorithm is more efficient than re-computing the optimal transportation cost that needs at least one traversal over all the $O(|E|) = O(|V|^2)$ variables in general cases. Our experiments demonstrate that our algorithm significantly outperforms existing algorithms in the dynamic scenarios.
Model-based clustering is a powerful tool that is often used to discover hidden structure in data by grouping observational units that exhibit similar response values. Recently, clustering methods have been developed that permit incorporating an ``initial'' partition informed by expert opinion. Then, using some similarity criteria, partitions different from the initial one are down weighted, i.e. they are assigned reduced probabilities. These methods represent an exciting new direction of method development in clustering techniques. We add to this literature a method that very flexibly permits assigning varying levels of uncertainty to any subset of the partition. This is particularly useful in practice as there is rarely clear prior information with regards to the entire partition. Our approach is not based on partition penalties but considers individual allocation probabilities for each unit (e.g., locally weighted prior information). We illustrate the gains in prior specification flexibility via simulation studies and an application to a dataset concerning spatio-temporal evolution of ${\rm PM}_{10}$ measurements in Germany.
Cycles are fundamental elements in graph-structured data and have demonstrated their effectiveness in enhancing graph learning models. To encode such information into a graph learning framework, prior works often extract a summary quantity, ranging from the number of cycles to the more sophisticated persistence diagram summaries. However, more detailed information, such as which edges are encoded in a cycle, has not yet been used in graph neural networks. In this paper, we make one step towards addressing this gap, and propose a structure encoding module, called CycleNet, that encodes cycle information via edge structure encoding in a permutation invariant manner. To efficiently encode the space of all cycles, we start with a cycle basis (i.e., a minimal set of cycles generating the cycle space) which we compute via the kernel of the 1-dimensional Hodge Laplacian of the input graph. To guarantee the encoding is invariant w.r.t. the choice of cycle basis, we encode the cycle information via the orthogonal projector of the cycle basis, which is inspired by BasisNet proposed by Lim et al. We also develop a more efficient variant which however requires that the input graph has a unique shortest cycle basis. To demonstrate the effectiveness of the proposed module, we provide some theoretical understandings of its expressive power. Moreover, we show via a range of experiments that networks enhanced by our CycleNet module perform better in various benchmarks compared to several existing SOTA models.
Compositional data are characterized by the fact that their elemental information is contained in simple pairwise logratios of the parts that constitute the composition. While pairwise logratios are typically easy to interpret, the number of possible pairs to consider quickly becomes (too) large even for medium-sized compositions, which might hinder interpretability in further multivariate analyses. Sparse methods can therefore be useful to identify few, important pairwise logratios (respectively parts contained in them) from the total candidate set. To this end, we propose a procedure based on the construction of all possible pairwise logratios and employ sparse principal component analysis to identify important pairwise logratios. The performance of the procedure is demonstrated both with simulated and real-world data. In our empirical analyses, we propose three visual tools showing (i) the balance between sparsity and explained variability, (ii) stability of the pairwise logratios, and (iii) importance of the original compositional parts to aid practitioners with their model interpretation.
Combinatorial optimization finds an optimal solution within a discrete set of variables and constraints. The field has seen tremendous progress both in research and industry. With the success of deep learning in the past decade, a recent trend in combinatorial optimization has been to improve state-of-the-art combinatorial optimization solvers by replacing key heuristic components with machine learning (ML) models. In this paper, we investigate two essential aspects of machine learning algorithms for combinatorial optimization: temporal characteristics and attention. We argue that for the task of variable selection in the branch-and-bound (B&B) algorithm, incorporating the temporal information as well as the bipartite graph attention improves the solver's performance. We support our claims with intuitions and numerical results over several standard datasets used in the literature and competitions. Code is available at: //developer.huaweicloud.com/develop/aigallery/notebook/detail?id=047c6cf2-8463-40d7-b92f-7b2ca998e935
The functional linear model is an important extension of the classical regression model allowing for scalar responses to be modeled as functions of stochastic processes. Yet, despite the usefulness and popularity of the functional linear model in recent years, most treatments, theoretical and practical alike, suffer either from (i) lack of resistance towards the many types of anomalies one may encounter with functional data or (ii) biases resulting from the use of discretely sampled functional data instead of completely observed data. To address these deficiencies, this paper introduces and studies the first class of robust functional regression estimators for partially observed functional data. The proposed broad class of estimators is based on thin-plate splines with a novel computationally efficient quadratic penalty, is easily implementable and enjoys good theoretical properties under weak assumptions. We show that, in the incomplete data setting, both the sample size and discretization error of the processes determine the asymptotic rate of convergence of functional regression estimators and the latter cannot be ignored. These theoretical properties remain valid even with multi-dimensional random fields acting as predictors and random smoothing parameters. The effectiveness of the proposed class of estimators in practice is demonstrated by means of a simulation study and a real-data example.
The existence of representative datasets is a prerequisite of many successful artificial intelligence and machine learning models. However, the subsequent application of these models often involves scenarios that are inadequately represented in the data used for training. The reasons for this are manifold and range from time and cost constraints to ethical considerations. As a consequence, the reliable use of these models, especially in safety-critical applications, is a huge challenge. Leveraging additional, already existing sources of knowledge is key to overcome the limitations of purely data-driven approaches, and eventually to increase the generalization capability of these models. Furthermore, predictions that conform with knowledge are crucial for making trustworthy and safe decisions even in underrepresented scenarios. This work provides an overview of existing techniques and methods in the literature that combine data-based models with existing knowledge. The identified approaches are structured according to the categories integration, extraction and conformity. Special attention is given to applications in the field of autonomous driving.
Triple extraction is an essential task in information extraction for natural language processing and knowledge graph construction. In this paper, we revisit the end-to-end triple extraction task for sequence generation. Since generative triple extraction may struggle to capture long-term dependencies and generate unfaithful triples, we introduce a novel model, contrastive triple extraction with a generative transformer. Specifically, we introduce a single shared transformer module for encoder-decoder-based generation. To generate faithful results, we propose a novel triplet contrastive training object. Moreover, we introduce two mechanisms to further improve model performance (i.e., batch-wise dynamic attention-masking and triple-wise calibration). Experimental results on three datasets (i.e., NYT, WebNLG, and MIE) show that our approach achieves better performance than that of baselines.
It is important to detect anomalous inputs when deploying machine learning systems. The use of larger and more complex inputs in deep learning magnifies the difficulty of distinguishing between anomalous and in-distribution examples. At the same time, diverse image and text data are available in enormous quantities. We propose leveraging these data to improve deep anomaly detection by training anomaly detectors against an auxiliary dataset of outliers, an approach we call Outlier Exposure (OE). This enables anomaly detectors to generalize and detect unseen anomalies. In extensive experiments on natural language processing and small- and large-scale vision tasks, we find that Outlier Exposure significantly improves detection performance. We also observe that cutting-edge generative models trained on CIFAR-10 may assign higher likelihoods to SVHN images than to CIFAR-10 images; we use OE to mitigate this issue. We also analyze the flexibility and robustness of Outlier Exposure, and identify characteristics of the auxiliary dataset that improve performance.
Aspect based sentiment analysis (ABSA) can provide more detailed information than general sentiment analysis, because it aims to predict the sentiment polarities of the given aspects or entities in text. We summarize previous approaches into two subtasks: aspect-category sentiment analysis (ACSA) and aspect-term sentiment analysis (ATSA). Most previous approaches employ long short-term memory and attention mechanisms to predict the sentiment polarity of the concerned targets, which are often complicated and need more training time. We propose a model based on convolutional neural networks and gating mechanisms, which is more accurate and efficient. First, the novel Gated Tanh-ReLU Units can selectively output the sentiment features according to the given aspect or entity. The architecture is much simpler than attention layer used in the existing models. Second, the computations of our model could be easily parallelized during training, because convolutional layers do not have time dependency as in LSTM layers, and gating units also work independently. The experiments on SemEval datasets demonstrate the efficiency and effectiveness of our models.