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We propose methods to train convolutional neural networks (CNNs) with both binarized weights and activations, leading to quantized models that are specifically friendly to mobile devices with limited power capacity and computation resources. Previous works on quantizing CNNs often seek to approximate the floating-point information using a set of discrete values, which we call value approximation, typically assuming the same architecture as the full-precision networks. Here we take a novel "structure approximation" view of quantization -- it is very likely that different architectures designed for low-bit networks may be better for achieving good performance. In particular, we propose a "network decomposition" strategy, termed Group-Net, in which we divide the network into groups. Thus, each full-precision group can be effectively reconstructed by aggregating a set of homogeneous binary branches. In addition, we learn effective connections among groups to improve the representation capability. Moreover, the proposed Group-Net shows strong generalization to other tasks. For instance, we extend Group-Net for accurate semantic segmentation by embedding rich context into the binary structure. Furthermore, for the first time, we apply binary neural networks to object detection. Experiments on both classification, semantic segmentation and object detection tasks demonstrate the superior performance of the proposed methods over various quantized networks in the literature. Our methods outperform the previous best binary neural networks in terms of accuracy and computation efficiency.

Accurate brain tumor segmentation from Magnetic Resonance Imaging (MRI) is desirable to joint learning of multimodal images. However, in clinical practice, it is not always possible to acquire a complete set of MRIs, and the problem of missing modalities causes severe performance degradation in existing multimodal segmentation methods. In this work, we present the first attempt to exploit the Transformer for multimodal brain tumor segmentation that is robust to any combinatorial subset of available modalities. Concretely, we propose a novel multimodal Medical Transformer (mmFormer) for incomplete multimodal learning with three main components: the hybrid modality-specific encoders that bridge a convolutional encoder and an intra-modal Transformer for both local and global context modeling within each modality; an inter-modal Transformer to build and align the long-range correlations across modalities for modality-invariant features with global semantics corresponding to tumor region; a decoder that performs a progressive up-sampling and fusion with the modality-invariant features to generate robust segmentation. Besides, auxiliary regularizers are introduced in both encoder and decoder to further enhance the model's robustness to incomplete modalities. We conduct extensive experiments on the public BraTS $2018$ dataset for brain tumor segmentation. The results demonstrate that the proposed mmFormer outperforms the state-of-the-art methods for incomplete multimodal brain tumor segmentation on almost all subsets of incomplete modalities, especially by an average 19.07% improvement of Dice on tumor segmentation with only one available modality. The code is available at //github.com/YaoZhang93/mmFormer.

Previous methods on multimodal groupwise registration typically require certain highly specialized similarity metrics with restrained applicability. In this work, we instead propose a general framework which formulates groupwise registration as a procedure of hierarchical Bayesian inference. Here, the imaging process of multimodal medical images, including shape transition and appearance variation, is characterized by a disentangled variational auto-encoder. To this end, we propose a novel variational posterior and network architecture that facilitate joint learning of the common structural representation and the desired spatial correspondences. The performance of the proposed model was validated on two publicly available multimodal datasets, i.e., BrainWeb and MS-CMR of the heart. Results have demonstrated the efficacy of our framework in realizing multimodal groupwise registration in an end-to-end fashion.

Change detection is an important synthetic aperture radar (SAR) application, usually used to detect changes on the ground scene measurements in different moments in time. Traditionally, change detection algorithm (CDA) is mainly designed for two synthetic aperture radar (SAR) images retrieved at different instants. However, more images can be used to improve the algorithms performance, witch emerges as a research topic on SAR change detection. Image stack information can be treated as a data series over time and can be modeled by autoregressive (AR) models. Thus, we present some initial findings on SAR change detection based on image stack considering AR models. Applying AR model for each pixel position in the image stack, we obtained an estimated image of the ground scene which can be used as a reference image for CDA. The experimental results reveal that ground scene estimates by the AR models is accurate and can be used for change detection applications.

With the progress of Mars exploration, numerous Mars image data are collected and need to be analyzed. However, due to the imbalance and distortion of Martian data, the performance of existing computer vision models is unsatisfactory. In this paper, we introduce a semi-supervised framework for machine vision on Mars and try to resolve two specific tasks: classification and segmentation. Contrastive learning is a powerful representation learning technique. However, there is too much information overlap between Martian data samples, leading to a contradiction between contrastive learning and Martian data. Our key idea is to reconcile this contradiction with the help of annotations and further take advantage of unlabeled data to improve performance. For classification, we propose to ignore inner-class pairs on labeled data as well as neglect negative pairs on unlabeled data, forming supervised inter-class contrastive learning and unsupervised similarity learning. For segmentation, we extend supervised inter-class contrastive learning into an element-wise mode and use online pseudo labels for supervision on unlabeled areas. Experimental results show that our learning strategies can improve the classification and segmentation models by a large margin and outperform state-of-the-art approaches.

We propose a theoretical framework that generalizes simple and fast algorithms for hierarchical agglomerative clustering to weighted graphs with both attractive and repulsive interactions between the nodes. This framework defines GASP, a Generalized Algorithm for Signed graph Partitioning, and allows us to explore many combinations of different linkage criteria and cannot-link constraints. We prove the equivalence of existing clustering methods to some of those combinations and introduce new algorithms for combinations that have not been studied before. We study both theoretical and empirical properties of these combinations and prove that some of these define an ultrametric on the graph. We conduct a systematic comparison of various instantiations of GASP on a large variety of both synthetic and existing signed clustering problems, in terms of accuracy but also efficiency and robustness to noise. Lastly, we show that some of the algorithms included in our framework, when combined with the predictions from a CNN model, result in a simple bottom-up instance segmentation pipeline. Going all the way from pixels to final segments with a simple procedure, we achieve state-of-the-art accuracy on the CREMI 2016 EM segmentation benchmark without requiring domain-specific superpixels.

The fully convolutional network (FCN) with an encoder-decoder architecture has been the standard paradigm for semantic segmentation. The encoder-decoder architecture utilizes an encoder to capture multilevel feature maps, which are incorporated into the final prediction by a decoder. As the context is crucial for precise segmentation, tremendous effort has been made to extract such information in an intelligent fashion, including employing dilated/atrous convolutions or inserting attention modules. However, these endeavors are all based on the FCN architecture with ResNet or other backbones, which cannot fully exploit the context from the theoretical concept. By contrast, we introduce the Swin Transformer as the backbone to extract the context information and design a novel decoder of densely connected feature aggregation module (DCFAM) to restore the resolution and produce the segmentation map. The experimental results on two remotely sensed semantic segmentation datasets demonstrate the effectiveness of the proposed scheme.Code is available at //github.com/WangLibo1995/GeoSeg

Residual networks (ResNets) have displayed impressive results in pattern recognition and, recently, have garnered considerable theoretical interest due to a perceived link with neural ordinary differential equations (neural ODEs). This link relies on the convergence of network weights to a smooth function as the number of layers increases. We investigate the properties of weights trained by stochastic gradient descent and their scaling with network depth through detailed numerical experiments. We observe the existence of scaling regimes markedly different from those assumed in neural ODE literature. Depending on certain features of the network architecture, such as the smoothness of the activation function, one may obtain an alternative ODE limit, a stochastic differential equation or neither of these. These findings cast doubts on the validity of the neural ODE model as an adequate asymptotic description of deep ResNets and point to an alternative class of differential equations as a better description of the deep network limit.

Deep neural network architectures have traditionally been designed and explored with human expertise in a long-lasting trial-and-error process. This process requires huge amount of time, expertise, and resources. To address this tedious problem, we propose a novel algorithm to optimally find hyperparameters of a deep network architecture automatically. We specifically focus on designing neural architectures for medical image segmentation task. Our proposed method is based on a policy gradient reinforcement learning for which the reward function is assigned a segmentation evaluation utility (i.e., dice index). We show the efficacy of the proposed method with its low computational cost in comparison with the state-of-the-art medical image segmentation networks. We also present a new architecture design, a densely connected encoder-decoder CNN, as a strong baseline architecture to apply the proposed hyperparameter search algorithm. We apply the proposed algorithm to each layer of the baseline architectures. As an application, we train the proposed system on cine cardiac MR images from Automated Cardiac Diagnosis Challenge (ACDC) MICCAI 2017. Starting from a baseline segmentation architecture, the resulting network architecture obtains the state-of-the-art results in accuracy without performing any trial-and-error based architecture design approaches or close supervision of the hyperparameters changes.

A variety of deep neural networks have been applied in medical image segmentation and achieve good performance. Unlike natural images, medical images of the same imaging modality are characterized by the same pattern, which indicates that same normal organs or tissues locate at similar positions in the images. Thus, in this paper we try to incorporate the prior knowledge of medical images into the structure of neural networks such that the prior knowledge can be utilized for accurate segmentation. Based on this idea, we propose a novel deep network called knowledge-based fully convolutional network (KFCN) for medical image segmentation. The segmentation function and corresponding error is analyzed. We show the existence of an asymptotically stable region for KFCN which traditional FCN doesn't possess. Experiments validate our knowledge assumption about the incorporation of prior knowledge into the convolution kernels of KFCN and show that KFCN can achieve a reasonable segmentation and a satisfactory accuracy.