In representation learning, there has been recent interest in developing algorithms to disentangle the ground-truth generative factors behind a dataset, and metrics to quantify how fully this occurs. However, these algorithms and metrics often assume that both representations and ground-truth factors are flat, continuous, and factorized, whereas many real-world generative processes involve rich hierarchical structure, mixtures of discrete and continuous variables with dependence between them, and even varying intrinsic dimensionality. In this work, we develop benchmarks, algorithms, and metrics for learning such hierarchical representations.
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Representation learning enables us to automatically extract generic feature representations from a dataset to solve another machine learning task. Recently, extracted feature representations by a representation learning algorithm and a simple predictor have exhibited state-of-the-art performance on several machine learning tasks. Despite its remarkable progress, there exist various ways to evaluate representation learning algorithms depending on the application because of the flexibility of representation learning. To understand the current representation learning, we review evaluation methods of representation learning algorithms and theoretical analyses. On the basis of our evaluation survey, we also discuss the future direction of representation learning. Note that this survey is the extended version of Nozawa and Sato (2022).
Link prediction is a key problem for network-structured data, attracting considerable research efforts owing to its diverse applications. The current link prediction methods focus on general networks and are overly dependent on either the closed triangular structure of networks or node attributes. Their performance on sparse or highly hierarchical networks has not been well studied. On the other hand, the available tree-like benchmark datasets are either simulated, with limited node information, or small in scale. To bridge this gap, we present a new benchmark dataset TeleGraph, a highly sparse and hierarchical telecommunication network associated with rich node attributes, for assessing and fostering the link inference techniques. Our empirical results suggest that most of the algorithms fail to produce a satisfactory performance on a nearly tree-like dataset, which calls for special attention when designing or deploying the link prediction algorithm in practice.
Recommender systems aim to recommend new items to users by learning user and item representations. In practice, these representations are highly entangled as they consist of information about multiple factors, including user's interests, item attributes along with confounding factors such as user conformity, and item popularity. Considering these entangled representations for inferring user preference may lead to biased recommendations (e.g., when the recommender model recommends popular items even if they do not align with the user's interests). Recent research proposes to debias by modeling a recommender system from a causal perspective. The exposure and the ratings are analogous to the treatment and the outcome in the causal inference framework, respectively. The critical challenge in this setting is accounting for the hidden confounders. These confounders are unobserved, making it hard to measure them. On the other hand, since these confounders affect both the exposure and the ratings, it is essential to account for them in generating debiased recommendations. To better approximate hidden confounders, we propose to leverage network information (i.e., user-social and user-item networks), which are shown to influence how users discover and interact with an item. Aside from the user conformity, aspects of confounding such as item popularity present in the network information is also captured in our method with the aid of \textit{causal disentanglement} which unravels the learned representations into independent factors that are responsible for (a) modeling the exposure of an item to the user, (b) predicting the ratings, and (c) controlling the hidden confounders. Experiments on real-world datasets validate the effectiveness of the proposed model for debiasing recommender systems.
The adaptive processing of structured data is a long-standing research topic in machine learning that investigates how to automatically learn a mapping from a structured input to outputs of various nature. Recently, there has been an increasing interest in the adaptive processing of graphs, which led to the development of different neural network-based methodologies. In this thesis, we take a different route and develop a Bayesian Deep Learning framework for graph learning. The dissertation begins with a review of the principles over which most of the methods in the field are built, followed by a study on graph classification reproducibility issues. We then proceed to bridge the basic ideas of deep learning for graphs with the Bayesian world, by building our deep architectures in an incremental fashion. This framework allows us to consider graphs with discrete and continuous edge features, producing unsupervised embeddings rich enough to reach the state of the art on several classification tasks. Our approach is also amenable to a Bayesian nonparametric extension that automatizes the choice of almost all model's hyper-parameters. Two real-world applications demonstrate the efficacy of deep learning for graphs. The first concerns the prediction of information-theoretic quantities for molecular simulations with supervised neural models. After that, we exploit our Bayesian models to solve a malware-classification task while being robust to intra-procedural code obfuscation techniques. We conclude the dissertation with an attempt to blend the best of the neural and Bayesian worlds together. The resulting hybrid model is able to predict multimodal distributions conditioned on input graphs, with the consequent ability to model stochasticity and uncertainty better than most works. Overall, we aim to provide a Bayesian perspective into the articulated research field of deep learning for graphs.
Learning disentanglement aims at finding a low dimensional representation which consists of multiple explanatory and generative factors of the observational data. The framework of variational autoencoder (VAE) is commonly used to disentangle independent factors from observations. However, in real scenarios, factors with semantics are not necessarily independent. Instead, there might be an underlying causal structure which renders these factors dependent. We thus propose a new VAE based framework named CausalVAE, which includes a Causal Layer to transform independent exogenous factors into causal endogenous ones that correspond to causally related concepts in data. We further analyze the model identifiabitily, showing that the proposed model learned from observations recovers the true one up to a certain degree. Experiments are conducted on various datasets, including synthetic and real word benchmark CelebA. Results show that the causal representations learned by CausalVAE are semantically interpretable, and their causal relationship as a Directed Acyclic Graph (DAG) is identified with good accuracy. Furthermore, we demonstrate that the proposed CausalVAE model is able to generate counterfactual data through "do-operation" to the causal factors.
Graph Neural Networks (GNNs) draw their strength from explicitly modeling the topological information of structured data. However, existing GNNs suffer from limited capability in capturing the hierarchical graph representation which plays an important role in graph classification. In this paper, we innovatively propose hierarchical graph capsule network (HGCN) that can jointly learn node embeddings and extract graph hierarchies. Specifically, disentangled graph capsules are established by identifying heterogeneous factors underlying each node, such that their instantiation parameters represent different properties of the same entity. To learn the hierarchical representation, HGCN characterizes the part-whole relationship between lower-level capsules (part) and higher-level capsules (whole) by explicitly considering the structure information among the parts. Experimental studies demonstrate the effectiveness of HGCN and the contribution of each component.
Graph Neural Networks (GNNs), which generalize deep neural networks to graph-structured data, have drawn considerable attention and achieved state-of-the-art performance in numerous graph related tasks. However, existing GNN models mainly focus on designing graph convolution operations. The graph pooling (or downsampling) operations, that play an important role in learning hierarchical representations, are usually overlooked. In this paper, we propose a novel graph pooling operator, called Hierarchical Graph Pooling with Structure Learning (HGP-SL), which can be integrated into various graph neural network architectures. HGP-SL incorporates graph pooling and structure learning into a unified module to generate hierarchical representations of graphs. More specifically, the graph pooling operation adaptively selects a subset of nodes to form an induced subgraph for the subsequent layers. To preserve the integrity of graph's topological information, we further introduce a structure learning mechanism to learn a refined graph structure for the pooled graph at each layer. By combining HGP-SL operator with graph neural networks, we perform graph level representation learning with focus on graph classification task. Experimental results on six widely used benchmarks demonstrate the effectiveness of our proposed model.
Recently, ensemble has been applied to deep metric learning to yield state-of-the-art results. Deep metric learning aims to learn deep neural networks for feature embeddings, distances of which satisfy given constraint. In deep metric learning, ensemble takes average of distances learned by multiple learners. As one important aspect of ensemble, the learners should be diverse in their feature embeddings. To this end, we propose an attention-based ensemble, which uses multiple attention masks, so that each learner can attend to different parts of the object. We also propose a divergence loss, which encourages diversity among the learners. The proposed method is applied to the standard benchmarks of deep metric learning and experimental results show that it outperforms the state-of-the-art methods by a significant margin on image retrieval tasks.
Recently, deep learning has achieved very promising results in visual object tracking. Deep neural networks in existing tracking methods require a lot of training data to learn a large number of parameters. However, training data is not sufficient for visual object tracking as annotations of a target object are only available in the first frame of a test sequence. In this paper, we propose to learn hierarchical features for visual object tracking by using tree structure based Recursive Neural Networks (RNN), which have fewer parameters than other deep neural networks, e.g. Convolutional Neural Networks (CNN). First, we learn RNN parameters to discriminate between the target object and background in the first frame of a test sequence. Tree structure over local patches of an exemplar region is randomly generated by using a bottom-up greedy search strategy. Given the learned RNN parameters, we create two dictionaries regarding target regions and corresponding local patches based on the learned hierarchical features from both top and leaf nodes of multiple random trees. In each of the subsequent frames, we conduct sparse dictionary coding on all candidates to select the best candidate as the new target location. In addition, we online update two dictionaries to handle appearance changes of target objects. Experimental results demonstrate that our feature learning algorithm can significantly improve tracking performance on benchmark datasets.
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