Decoding non-invasive cognitive signals to natural language has long been the goal of building practical brain-computer interfaces (BCIs). Recent major milestones have successfully decoded cognitive signals like functional Magnetic Resonance Imaging (fMRI) and electroencephalogram (EEG) into text under open vocabulary setting. However, how to split the datasets for training, validating, and testing in cognitive signal decoding task still remains controversial. In this paper, we conduct systematic analysis on current dataset splitting methods and find the existence of data contamination largely exaggerates model performance. Specifically, first we find the leakage of test subjects' cognitive signals corrupts the training of a robust encoder. Second, we prove the leakage of text stimuli causes the auto-regressive decoder to memorize information in test set. The decoder generates highly accurate text not because it truly understands cognitive signals. To eliminate the influence of data contamination and fairly evaluate different models' generalization ability, we propose a new splitting method for different types of cognitive datasets (e.g. fMRI, EEG). We also test the performance of SOTA Brain-to-Text decoding models under the proposed dataset splitting paradigm as baselines for further research.
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Transformer-based models have dominated natural language processing and other areas in the last few years due to their superior (zero-shot) performance on benchmark datasets. However, these models are poorly understood due to their complexity and size. While probing-based methods are widely used to understand specific properties, the structures of the representation space are not systematically characterized; consequently, it is unclear how such models generalize and overgeneralize to new inputs beyond datasets. In this paper, based on a new gradient descent optimization method, we are able to explore the embedding space of a commonly used vision-language model. Using the Imagenette dataset, we show that while the model achieves over 99\% zero-shot classification performance, it fails systematic evaluations completely. Using a linear approximation, we provide a framework to explain the striking differences. We have also obtained similar results using a different model to support that our results are applicable to other transformer models with continuous inputs. We also propose a robust way to detect the modified images.
As large language models (LLMs) become more capable, fine-tuning techniques for aligning with human intent are increasingly important. A key consideration for aligning these models is how to most effectively use human resources, or model resources in the case where LLMs themselves are used as oracles. Reinforcement learning from Human or AI preferences (RLHF/RLAIF) is the most prominent example of such a technique, but is complex and often unstable. Direct Preference Optimization (DPO) has recently been proposed as a simpler and more stable alternative. In this work, we develop an active learning strategy for DPO to make better use of preference labels. We propose a practical acquisition function for prompt/completion pairs based on the predictive entropy of the language model and a measure of certainty of the implicit preference model optimized by DPO. We demonstrate how our approach improves both the rate of learning and final performance of fine-tuning on pairwise preference data.
Several approaches to graphically representing context-specific relations among jointly distributed categorical variables have been proposed, along with structure learning algorithms. While existing optimization-based methods have limited scalability due to the large number of context-specific models, the constraint-based methods are more prone to error than even constraint-based DAG learning algorithms since more relations must be tested. We present a hybrid algorithm for learning context-specific models that scales to hundreds of variables while testing no more constraints than standard DAG learning algorithms. Scalable learning is achieved through a combination of an order-based MCMC algorithm and sparsity assumptions analogous to those typically invoked for DAG models. To implement the method, we solve a special case of an open problem recently posed by Alon and Balogh. The method is shown to perform well on synthetic data and real world examples, in terms of both accuracy and scalability.
Recently text-to-image models have gained widespread attention in the community due to their controllable and high-quality generation ability. However, the robustness of such models and their potential ethical issues have not been fully explored. In this paper, we introduce Universal Semantic Trigger, a meaningless token sequence that can be added at any location within the input text yet can induce generated images towards a preset semantic target.To thoroughly investigate it, we propose Semantic Gradient-based Search (SGS) framework. SGS automatically discovers the potential universal semantic triggers based on the given semantic targets. Furthermore, we design evaluation metrics to comprehensively evaluate semantic shift of images caused by these triggers. And our empirical analyses reveal that the mainstream open-source text-to-image models are vulnerable to our triggers, which could pose significant ethical threats. Our work contributes to a further understanding of text-to-image synthesis and helps users to automatically auditing their models before deployment.
Sign language to text is a crucial technology that can break down communication barriers for individuals with hearing difficulties. We replicate and try to improve on a recently published study. We evaluate models using BLEU and rBLEU metrics to ensure translation quality. During our ablation study, we found that the model's performance is significantly influenced by optimizers, activation functions, and label smoothing. Further research aims to refine visual feature capturing, enhance decoder utilization, and integrate pre-trained decoders for better translation outcomes. Our source code is available to facilitate replication of our results and encourage future research.
A mainstream type of current self-supervised learning methods pursues a general-purpose representation that can be well transferred to downstream tasks, typically by optimizing on a given pretext task such as instance discrimination. In this work, we argue that existing pretext tasks inevitably introduce biases into the learned representation, which in turn leads to biased transfer performance on various downstream tasks. To cope with this issue, we propose Maximum Entropy Coding (MEC), a more principled objective that explicitly optimizes on the structure of the representation, so that the learned representation is less biased and thus generalizes better to unseen downstream tasks. Inspired by the principle of maximum entropy in information theory, we hypothesize that a generalizable representation should be the one that admits the maximum entropy among all plausible representations. To make the objective end-to-end trainable, we propose to leverage the minimal coding length in lossy data coding as a computationally tractable surrogate for the entropy, and further derive a scalable reformulation of the objective that allows fast computation. Extensive experiments demonstrate that MEC learns a more generalizable representation than previous methods based on specific pretext tasks. It achieves state-of-the-art performance consistently on various downstream tasks, including not only ImageNet linear probe, but also semi-supervised classification, object detection, instance segmentation, and object tracking. Interestingly, we show that existing batch-wise and feature-wise self-supervised objectives could be seen equivalent to low-order approximations of MEC. Code and pre-trained models are available at //github.com/xinliu20/MEC.
Following unprecedented success on the natural language tasks, Transformers have been successfully applied to several computer vision problems, achieving state-of-the-art results and prompting researchers to reconsider the supremacy of convolutional neural networks (CNNs) as {de facto} operators. Capitalizing on these advances in computer vision, the medical imaging field has also witnessed growing interest for Transformers that can capture global context compared to CNNs with local receptive fields. Inspired from this transition, in this survey, we attempt to provide a comprehensive review of the applications of Transformers in medical imaging covering various aspects, ranging from recently proposed architectural designs to unsolved issues. Specifically, we survey the use of Transformers in medical image segmentation, detection, classification, reconstruction, synthesis, registration, clinical report generation, and other tasks. In particular, for each of these applications, we develop taxonomy, identify application-specific challenges as well as provide insights to solve them, and highlight recent trends. Further, we provide a critical discussion of the field's current state as a whole, including the identification of key challenges, open problems, and outlining promising future directions. We hope this survey will ignite further interest in the community and provide researchers with an up-to-date reference regarding applications of Transformer models in medical imaging. Finally, to cope with the rapid development in this field, we intend to regularly update the relevant latest papers and their open-source implementations at \url{//github.com/fahadshamshad/awesome-transformers-in-medical-imaging}.
External knowledge is often useful for natural language understanding tasks. We introduce a contextual text representation model called Conceptual-Contextual (CC) embeddings, which incorporates structured knowledge into text representations. Unlike entity embedding methods, our approach encodes a knowledge graph into a context model. CC embeddings can be easily reused for a wide range of tasks just like pre-trained language models. Our model effectively encodes the huge UMLS database by leveraging semantic generalizability. Experiments on electronic health records (EHRs) and medical text processing benchmarks showed our model gives a major boost to the performance of supervised medical NLP tasks.
External knowledge is often useful for natural language understanding tasks. We introduce a contextual text representation model called Conceptual-Contextual (CC) embeddings, which incorporates structured knowledge into text representations. Unlike entity embedding methods, our approach encodes a knowledge graph into a context model. CC embeddings can be easily reused for a wide range of tasks just like pre-trained language models. Our model effectively encodes the huge UMLS database by leveraging semantic generalizability. Experiments on electronic health records (EHRs) and medical text processing benchmarks showed our model gives a major boost to the performance of supervised medical NLP tasks.
Deep learning has yielded state-of-the-art performance on many natural language processing tasks including named entity recognition (NER). However, this typically requires large amounts of labeled data. In this work, we demonstrate that the amount of labeled training data can be drastically reduced when deep learning is combined with active learning. While active learning is sample-efficient, it can be computationally expensive since it requires iterative retraining. To speed this up, we introduce a lightweight architecture for NER, viz., the CNN-CNN-LSTM model consisting of convolutional character and word encoders and a long short term memory (LSTM) tag decoder. The model achieves nearly state-of-the-art performance on standard datasets for the task while being computationally much more efficient than best performing models. We carry out incremental active learning, during the training process, and are able to nearly match state-of-the-art performance with just 25\% of the original training data.
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