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We characterize structures such as monotonicity, convexity, and modality in smooth regression curves using persistent homology. Persistent homology is a key tool in topological data analysis that detects higher dimensional topological features such as connected components and holes (cycles or loops) in the data. In other words, persistent homology is a multiscale version of homology that characterizes sets based on the connected components and holes. We use super-level sets of functions to extract geometric features via persistent homology. In particular, we explore structures in regression curves via the persistent homology of super-level sets of a function, where the function of interest is - the first derivative of the regression function. In the course of this study, we extend an existing procedure of estimating the persistent homology for the first derivative of a regression function and establish its consistency. Moreover, as an application of the proposed methodology, we demonstrate that the persistent homology of the derivative of a function can reveal hidden structures in the function that are not visible from the persistent homology of the function itself. In addition, we also illustrate that the proposed procedure can be used to compare the shapes of two or more regression curves which is not possible merely from the persistent homology of the function itself.

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The approach to analysing compositional data has been dominated by the use of logratio transformations, to ensure exact subcompositional coherence and, in some situations, exact isometry as well. A problem with this approach is that data zeros, found in most applications, have to be replaced to allow the logarithmic transformation. An alternative new approach, called the `chiPower' transformation, which allows data zeros, is to combine the standardization inherent in the chi-square distance in correspondence analysis, with the essential elements of the Box-Cox power transformation. The chiPower transformation is justified because it} defines between-sample distances that tend to logratio distances for strictly positive data as the power parameter tends to zero, and are then equivalent to transforming to logratios. For data with zeros, a value of the power can be identified that brings the chiPower transformation as close as possible to a logratio transformation, without having to substitute the zeros. Especially in the area of high-dimensional data, this alternative approach can present such a high level of coherence and isometry as to be a valid approach to the analysis of compositional data. Furthermore, in a supervised learning context, if the compositional variables serve as predictors of a response in a modelling framework, for example generalized linear models, then the power can be used as a tuning parameter in optimizing the accuracy of prediction through cross-validation. The chiPower-transformed variables have a straightforward interpretation, since they are each identified with single compositional parts, not ratios.

In high-energy particle collisions, the primary collision products usually decay further resulting in tree-like, hierarchical structures with a priori unknown multiplicity. At the stable-particle level all decay products of a collision form permutation invariant sets of final state objects. The analogy to mathematical graphs gives rise to the idea that graph neural networks (GNNs), which naturally resemble these properties, should be best-suited to address many tasks related to high-energy particle physics. In this paper we describe a benchmark test of a typical GNN against neural networks of the well-established deep fully-connected feed-forward architecture. We aim at performing this comparison maximally unbiased in terms of nodes, hidden layers, or trainable parameters of the neural networks under study. As physics case we use the classification of the final state X produced in association with top quark-antiquark pairs in proton-proton collisions at the Large Hadron Collider at CERN, where X stands for a bottom quark-antiquark pair produced either non-resonantly or through the decay of an intermediately produced Z or Higgs boson.

New geometric methods for fast evaluation of derivatives of polynomial and rational B\'{e}zier curves are proposed. They apply an algorithm for evaluating polynomial or rational B\'{e}zier curves, which was recently given by the authors. Numerical tests show that the new approach is more efficient than the methods which use the famous de Casteljau algorithm. The algorithms work well even for high-order derivatives of rational B\'{e}zier curves of high degrees.

We analyze the Schr\"odingerisation method for quantum simulation of a general class of non-unitary dynamics with inhomogeneous source terms. The Schr\"odingerisation technique, introduced in \cite{JLY22a,JLY23}, transforms any linear ordinary and partial differential equations with non-unitary dynamics into a system under unitary dynamics via a warped phase transition that maps the equations into a higher dimension, making them suitable for quantum simulation. This technique can also be applied to these equations with inhomogeneous terms modeling source or forcing terms or boundary and interface conditions, and discrete dynamical systems such as iterative methods in numerical linear algebra, through extra equations in the system. Difficulty airses with the presense of inhomogeneous terms since it can change the stability of the original system. In this paper, we systematically study--both theoretically and numerically--the important issue of recovering the original variables from the Schr\"odingerized equations, even when the evolution operator contains unstable modes. We show that even with unstable modes, one can still construct a stable scheme, yet to recover the original variable one needs to use suitable data in the extended space. We analyze and compare both the discrete and continuous Fourier transforms used in the extended dimension, and derive corresponding error estimates, which allows one to use the more appropriate transform for specific equations. We also provide a smoother initialization for the Schrod\"odingerized system to gain higher order accuracy in the extended space. We homogenize the inhomogeneous terms with a stretch transformation, making it easier to recover the original variable. Our recovering technique also provides a simple and generic framework to solve general ill-posed problems in a computationally stable way.

We introduce novel finite element schemes for curve diffusion and elastic flow in arbitrary codimension. The schemes are based on a variational form of a system that includes a specifically chosen tangential motion. We derive optimal $L^2$- and $H^1$-error bounds for continuous-in-time semidiscrete finite element approximations that use piecewise linear elements. In addition, we consider fully discrete schemes and, in the case of curve diffusion, prove unconditional stability for it. Finally, we present several numerical simulations, including some convergence experiments that confirm the derived error bounds. The presented simulations suggest that the tangential motion leads to equidistribution in practice.

We prove explicit uniform two-sided bounds for the phase functions of Bessel functions and of their derivatives. As a consequence, we obtain new enclosures for the zeros of Bessel functions and their derivatives in terms of inverse values of some elementary functions. These bounds are valid, with a few exceptions, for all zeros and all Bessel functions with non-negative indices. We provide numerical evidence showing that our bounds either improve or closely match the best previously known ones.

We study the connection between the concavity properties of a measure $\nu$ and the convexity properties of the associated relative entropy $D(\cdot \Vert \nu)$ along optimal transport. As a corollary we prove a new dimensional Brunn-Minkowski inequality for centered star-shaped bodies, when the measure $\nu$ is log-concave with a p-homogeneous potential (such as the Gaussian measure). Our method allows us to go beyond the usual convexity assumption on the sets that is fundamentally essential for the standard differential-geometric technique in this area. We then take a finer look at the convexity properties of the Gaussian relative entropy, which yields new functional inequalities. First we obtain curvature and dimensional reinforcements to Otto--Villani's "HWI" inequality in the Gauss space, when restricted to even strongly log-concave measures. As corollaries, we obtain improved versions of Gross' logarithmic Sobolev inequality and Talgrand's transportation cost inequality in this setting.

Regression analysis is a central topic in statistical modeling, aiming to estimate the relationships between a dependent variable, commonly referred to as the response variable, and one or more independent variables, i.e., explanatory variables. Linear regression is by far the most popular method for performing this task in several fields of research, such as prediction, forecasting, or causal inference. Beyond various classical methods to solve linear regression problems, such as Ordinary Least Squares, Ridge, or Lasso regressions - which are often the foundation for more advanced machine learning (ML) techniques - the latter have been successfully applied in this scenario without a formal definition of statistical significance. At most, permutation or classical analyses based on empirical measures (e.g., residuals or accuracy) have been conducted to reflect the greater ability of ML estimations for detection. In this paper, we introduce a method, named Statistical Agnostic Regression (SAR), for evaluating the statistical significance of an ML-based linear regression based on concentration inequalities of the actual risk using the analysis of the worst case. To achieve this goal, similar to the classification problem, we define a threshold to establish that there is sufficient evidence with a probability of at least 1-eta to conclude that there is a linear relationship in the population between the explanatory (feature) and the response (label) variables. Simulations in only two dimensions demonstrate the ability of the proposed agnostic test to provide a similar analysis of variance given by the classical $F$ test for the slope parameter.

Mendelian randomization uses genetic variants as instrumental variables to make causal inferences about the effects of modifiable risk factors on diseases from observational data. One of the major challenges in Mendelian randomization is that many genetic variants are only modestly or even weakly associated with the risk factor of interest, a setting known as many weak instruments. Many existing methods, such as the popular inverse-variance weighted (IVW) method, could be biased when the instrument strength is weak. To address this issue, the debiased IVW (dIVW) estimator, which is shown to be robust to many weak instruments, was recently proposed. However, this estimator still has non-ignorable bias when the effective sample size is small. In this paper, we propose a modified debiased IVW (mdIVW) estimator by multiplying a modification factor to the original dIVW estimator. After this simple correction, we show that the bias of the mdIVW estimator converges to zero at a faster rate than that of the dIVW estimator under some regularity conditions. Moreover, the mdIVW estimator has smaller variance than the dIVW estimator.We further extend the proposed method to account for the presence of instrumental variable selection and balanced horizontal pleiotropy. We demonstrate the improvement of the mdIVW estimator over the dIVW estimator through extensive simulation studies and real data analysis.

We hypothesize that due to the greedy nature of learning in multi-modal deep neural networks, these models tend to rely on just one modality while under-fitting the other modalities. Such behavior is counter-intuitive and hurts the models' generalization, as we observe empirically. To estimate the model's dependence on each modality, we compute the gain on the accuracy when the model has access to it in addition to another modality. We refer to this gain as the conditional utilization rate. In the experiments, we consistently observe an imbalance in conditional utilization rates between modalities, across multiple tasks and architectures. Since conditional utilization rate cannot be computed efficiently during training, we introduce a proxy for it based on the pace at which the model learns from each modality, which we refer to as the conditional learning speed. We propose an algorithm to balance the conditional learning speeds between modalities during training and demonstrate that it indeed addresses the issue of greedy learning. The proposed algorithm improves the model's generalization on three datasets: Colored MNIST, Princeton ModelNet40, and NVIDIA Dynamic Hand Gesture.

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