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It is shown that a class of optical physical unclonable functions (PUFs) can be learned to arbitrary precision with arbitrarily high probability, even in the presence of noise, given access to polynomially many challenge-response pairs and polynomially bounded computational power, under mild assumptions about the distributions of the noise and challenge vectors. This extends the results of Rh\"uramir et al. (2013), who showed a subset of this class of PUFs to be learnable in polynomial time in the absence of noise, under the assumption that the optics of the PUF were either linear or had negligible nonlinear effects. We derive polynomial bounds for the required number of samples and the computational complexity of a linear regression algorithm, based on size parameters of the PUF, the distributions of the challenge and noise vectors, and the probability and accuracy of the regression algorithm, with a similar analysis to one done by Bootle et al. (2018), who demonstrated a learning attack on a poorly implemented version of the Learning With Errors problem.

Vision Transformers (ViTs) have shown impressive performance in computer vision, but their high computational cost, quadratic in the number of tokens, limits their adoption in computation-constrained applications. However, this large number of tokens may not be necessary, as not all tokens are equally important. In this paper, we investigate token pruning to accelerate inference for object detection and instance segmentation, extending prior works from image classification. Through extensive experiments, we offer four insights for dense tasks: (i) tokens should not be completely pruned and discarded, but rather preserved in the feature maps for later use. (ii) reactivating previously pruned tokens can further enhance model performance. (iii) a dynamic pruning rate based on images is better than a fixed pruning rate. (iv) a lightweight, 2-layer MLP can effectively prune tokens, achieving accuracy comparable with complex gating networks with a simpler design. We evaluate the impact of these design choices on COCO dataset and present a method integrating these insights that outperforms prior art token pruning models, significantly reducing performance drop from ~1.5 mAP to ~0.3 mAP for both boxes and masks. Compared to the dense counterpart that uses all tokens, our method achieves up to 34% faster inference speed for the whole network and 46% for the backbone.

The analysis of Synthetic Aperture Radar (SAR) imagery is an important step in remote sensing applications, and it is a challenging problem due to its inherent speckle noise. One typical solution is to model the data using the $G_I^0$ distribution and extract its roughness information, which in turn can be used in posterior imaging tasks, such as segmentation, classification and interpretation. This leads to the need of quick and reliable estimation of the roughness parameter from SAR data, especially with high resolution images. Unfortunately, traditional parameter estimation procedures are slow and prone to estimation failures. In this work, we proposed a neural network-based estimation framework that first learns how to predict underlying parameters of $G_I^0$ samples and then can be used to estimate the roughness of unseen data. We show that this approach leads to an estimator that is quicker, yields less estimation error and is less prone to failures than the traditional estimation procedures for this problem, even when we use a simple network. More importantly, we show that this same methodology can be generalized to handle image inputs and, even if trained on purely synthetic data for a few seconds, is able to perform real time pixel-wise roughness estimation for high resolution real SAR imagery.

Scientific Machine Learning (SciML) is a burgeoning field that synergistically combines domain-aware and interpretable models with agnostic machine learning techniques. In this work, we introduce GOKU-UI, an evolution of the SciML generative model GOKU-nets. GOKU-UI not only broadens the original model's spectrum to incorporate other classes of differential equations, such as Stochastic Differential Equations (SDEs), but also integrates attention mechanisms and a novel multiple shooting training strategy in the latent space. These enhancements have led to a significant increase in its performance in both reconstruction and forecast tasks, as demonstrated by our evaluation of simulated and empirical data. Specifically, GOKU-UI outperformed all baseline models on synthetic datasets even with a training set 16-fold smaller, underscoring its remarkable data efficiency. Furthermore, when applied to empirical human brain data, while incorporating stochastic Stuart-Landau oscillators into its dynamical core, it not only surpassed all baseline methods in the reconstruction task, but also demonstrated better prediction of future brain activity up to 15 seconds ahead. By training GOKU-UI on resting state fMRI data, we encoded whole-brain dynamics into a latent representation, learning an effective low-dimensional dynamical system model that could offer insights into brain functionality and open avenues for practical applications such as the classification of mental states or psychiatric conditions. Ultimately, our research provides further impetus for the field of Scientific Machine Learning, showcasing the potential for advancements when established scientific insights are interwoven with modern machine learning.

The distributed data analytic system -- Spark is a common choice for processing massive volumes of heterogeneous data, while it is challenging to tune its parameters to achieve high performance. Recent studies try to employ auto-tuning techniques to solve this problem but suffer from three issues: limited functionality, high overhead, and inefficient search. In this paper, we present a general and efficient Spark tuning framework that can deal with the three issues simultaneously. First, we introduce a generalized tuning formulation, which can support multiple tuning goals and constraints conveniently, and a Bayesian optimization (BO) based solution to solve this generalized optimization problem. Second, to avoid high overhead from additional offline evaluations in existing methods, we propose to tune parameters along with the actual periodic executions of each job (i.e., online evaluations). To ensure safety during online job executions, we design a safe configuration acquisition method that models the safe region. Finally, three innovative techniques are leveraged to further accelerate the search process: adaptive sub-space generation, approximate gradient descent, and meta-learning method. We have implemented this framework as an independent cloud service, and applied it to the data platform in Tencent. The empirical results on both public benchmarks and large-scale production tasks demonstrate its superiority in terms of practicality, generality, and efficiency. Notably, this service saves an average of 57.00% memory cost and 34.93% CPU cost on 25K in-production tasks within 20 iterations, respectively.

The Distributional Random Forest (DRF) is a recently introduced Random Forest algorithm to estimate multivariate conditional distributions. Due to its general estimation procedure, it can be employed to estimate a wide range of targets such as conditional average treatment effects, conditional quantiles, and conditional correlations. However, only results about the consistency and convergence rate of the DRF prediction are available so far. We characterize the asymptotic distribution of DRF and develop a bootstrap approximation of it. This allows us to derive inferential tools for quantifying standard errors and the construction of confidence regions that have asymptotic coverage guarantees. In simulation studies, we empirically validate the developed theory for inference of low-dimensional targets and for testing distributional differences between two populations.

Relation Extraction (RE) is the task of extracting semantic relationships between entities in a sentence and aligning them to relations defined in a vocabulary, which is generally in the form of a Knowledge Graph (KG) or an ontology. Various approaches have been proposed so far to address this task. However, applying these techniques to biomedical text often yields unsatisfactory results because it is hard to infer relations directly from sentences due to the nature of the biomedical relations. To address these issues, we present a novel technique called ReOnto, that makes use of neuro symbolic knowledge for the RE task. ReOnto employs a graph neural network to acquire the sentence representation and leverages publicly accessible ontologies as prior knowledge to identify the sentential relation between two entities. The approach involves extracting the relation path between the two entities from the ontology. We evaluate the effect of using symbolic knowledge from ontologies with graph neural networks. Experimental results on two public biomedical datasets, BioRel and ADE, show that our method outperforms all the baselines (approximately by 3\%).

Graph Convolutional Networks (GCNs) have been widely applied in various fields due to their significant power on processing graph-structured data. Typical GCN and its variants work under a homophily assumption (i.e., nodes with same class are prone to connect to each other), while ignoring the heterophily which exists in many real-world networks (i.e., nodes with different classes tend to form edges). Existing methods deal with heterophily by mainly aggregating higher-order neighborhoods or combing the immediate representations, which leads to noise and irrelevant information in the result. But these methods did not change the propagation mechanism which works under homophily assumption (that is a fundamental part of GCNs). This makes it difficult to distinguish the representation of nodes from different classes. To address this problem, in this paper we design a novel propagation mechanism, which can automatically change the propagation and aggregation process according to homophily or heterophily between node pairs. To adaptively learn the propagation process, we introduce two measurements of homophily degree between node pairs, which is learned based on topological and attribute information, respectively. Then we incorporate the learnable homophily degree into the graph convolution framework, which is trained in an end-to-end schema, enabling it to go beyond the assumption of homophily. More importantly, we theoretically prove that our model can constrain the similarity of representations between nodes according to their homophily degree. Experiments on seven real-world datasets demonstrate that this new approach outperforms the state-of-the-art methods under heterophily or low homophily, and gains competitive performance under homophily.

Dynamic programming (DP) solves a variety of structured combinatorial problems by iteratively breaking them down into smaller subproblems. In spite of their versatility, DP algorithms are usually non-differentiable, which hampers their use as a layer in neural networks trained by backpropagation. To address this issue, we propose to smooth the max operator in the dynamic programming recursion, using a strongly convex regularizer. This allows to relax both the optimal value and solution of the original combinatorial problem, and turns a broad class of DP algorithms into differentiable operators. Theoretically, we provide a new probabilistic perspective on backpropagating through these DP operators, and relate them to inference in graphical models. We derive two particular instantiations of our framework, a smoothed Viterbi algorithm for sequence prediction and a smoothed DTW algorithm for time-series alignment. We showcase these instantiations on two structured prediction tasks and on structured and sparse attention for neural machine translation.

Image segmentation is considered to be one of the critical tasks in hyperspectral remote sensing image processing. Recently, convolutional neural network (CNN) has established itself as a powerful model in segmentation and classification by demonstrating excellent performances. The use of a graphical model such as a conditional random field (CRF) contributes further in capturing contextual information and thus improving the segmentation performance. In this paper, we propose a method to segment hyperspectral images by considering both spectral and spatial information via a combined framework consisting of CNN and CRF. We use multiple spectral cubes to learn deep features using CNN, and then formulate deep CRF with CNN-based unary and pairwise potential functions to effectively extract the semantic correlations between patches consisting of three-dimensional data cubes. Effective piecewise training is applied in order to avoid the computationally expensive iterative CRF inference. Furthermore, we introduce a deep deconvolution network that improves the segmentation masks. We also introduce a new dataset and experimented our proposed method on it along with several widely adopted benchmark datasets to evaluate the effectiveness of our method. By comparing our results with those from several state-of-the-art models, we show the promising potential of our method.