Summaries of medical text shall be faithful by being consistent and factual with source inputs, which is an important but understudied topic for safety and efficiency in healthcare. In this paper, we investigate and improve faithfulness in summarization on a broad range of medical summarization tasks. Our investigation reveals that current summarization models often produce unfaithful outputs for medical input text. We then introduce FaMeSumm, a framework to improve faithfulness by fine-tuning pre-trained language models based on medical knowledge. FaMeSumm performs contrastive learning on designed sets of faithful and unfaithful summaries, and it incorporates medical terms and their contexts to encourage faithful generation of medical terms. We conduct comprehensive experiments on three datasets in two languages: health question and radiology report summarization datasets in English, and a patient-doctor dialogue dataset in Chinese. Results demonstrate that FaMeSumm is flexible and effective by delivering consistent improvements over mainstream language models such as BART, T5, mT5, and PEGASUS, yielding state-of-the-art performances on metrics for faithfulness and general quality. Human evaluation by doctors also shows that FaMeSumm generates more faithful outputs. Our code is available at //github.com/psunlpgroup/FaMeSumm .
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The use of transfer learning with deep neural networks has increasingly become widespread for deploying well-tested computer vision systems to newer domains, especially those with limited datasets. We describe a transfer learning use case for a domain with a data-starved regime, having fewer than 100 labeled target samples. We evaluate the effectiveness of convolutional feature extraction and fine-tuning of overparameterized models with respect to the size of target training data, as well as their generalization performance on data with covariate shift, or out-of-distribution (OOD) data. Our experiments demonstrate that both overparameterization and feature reuse contribute to the successful application of transfer learning in training image classifiers in data-starved regimes. We provide visual explanations to support our findings and conclude that transfer learning enhances the performance of CNN architectures in data-starved regimes.
Deep neural networks have become the method of choice for solving many classification tasks, largely because they can fit very complex functions defined over raw data. The downside of such powerful learners is the danger of overfit. In this paper, we introduce a novel ensemble classifier for deep networks that effectively overcomes overfitting by combining models generated at specific intermediate epochs during training. Our method allows for the incorporation of useful knowledge obtained by the models during the overfitting phase without deterioration of the general performance, which is usually missed when early stopping is used. To motivate this approach, we begin with the theoretical analysis of a regression model, whose prediction -- that the variance among classifiers increases when overfit occurs -- is demonstrated empirically in deep networks in common use. Guided by these results, we construct a new ensemble-based prediction method, where the prediction is determined by the class that attains the most consensual prediction throughout the training epochs. Using multiple image and text classification datasets, we show that when regular ensembles suffer from overfit, our method eliminates the harmful reduction in generalization due to overfit, and often even surpasses the performance obtained by early stopping. Our method is easy to implement and can be integrated with any training scheme and architecture, without additional prior knowledge beyond the training set. It is thus a practical and useful tool to overcome overfit. Code is available at //github.com/uristern123/United-We-Stand-Using-Epoch-wise-Agreement-of-Ensembles-to-Combat-Overfit.
Covert communication (also known as steganography) is the practice of concealing a secret inside an innocuous-looking public object (cover) so that the modified public object (covert code) makes sense to everyone but only someone who knows the code can extract the secret (message). Linguistic steganography is the practice of encoding a secret message in natural language text such as spoken conversation or short public communications such as tweets.. While ad hoc methods for covert communications in specific domains exist ( JPEG images, Chinese poetry, etc), there is no general model for linguistic steganography specifically. We present a novel mathematical formalism for creating linguistic steganographic codes, with three parameters: Decodability (probability that the receiver of the coded message will decode the cover correctly), density (frequency of code words in a cover code), and detectability (probability that an attacker can tell the difference between an untampered cover compared to its steganized version). Verbal or linguistic steganography is most challenging because of its lack of artifacts to hide the secret message in. We detail a practical construction in Python of a steganographic code for Tweets using inserted words to encode hidden digits while using n-gram frequency distortion as the measure of detectability of the insertions. Using the publicly accessible Stanford Sentiment Analysis dataset we implemented the tweet steganization scheme -- a codeword (an existing word in the data set) inserted in random positions in random existing tweets to find the tweet that has the least possible n-gram distortion. We argue that this approximates KL distance in a localized manner at low cost and thus we get a linguistic steganography scheme that is both formal and practical and permits a tradeoff between codeword density and detectability of the covert message.
Advancements in clinical treatment are increasingly constrained by the limitations of supervised learning techniques, which depend heavily on large volumes of annotated data. The annotation process is not only costly but also demands substantial time from clinical specialists. Addressing this issue, we introduce the S4MI (Self-Supervision and Semi-Supervision for Medical Imaging) pipeline, a novel approach that leverages the advancements in self-supervised and semi-supervised learning. These techniques engage in auxiliary tasks that do not require labeling, thus simplifying the scaling of machine supervision compared to fully-supervised methods. Our study benchmarks these techniques on three distinct medical imaging datasets to evaluate their effectiveness in classification and segmentation tasks. Remarkably, we observed that self-supervised learning with only 10% of the annotation surpassed the performance of full annotation in the classification of most datasets. Similarly, the semi-supervised approach demonstrated superior outcomes in segmentation, outperforming fully-supervised methods with 50% fewer labels across all datasets. In line with our commitment to contributing to the scientific community, we have made the S4MI code openly accessible, allowing for broader application and further development of these methods.
The impression is crucial for the referring physicians to grasp key information since it is concluded from the findings and reasoning of radiologists. To alleviate the workload of radiologists and reduce repetitive human labor in impression writing, many researchers have focused on automatic impression generation. However, recent works on this task mainly summarize the corresponding findings and pay less attention to the radiology images. In clinical, radiographs can provide more detailed valuable observations to enhance radiologists' impression writing, especially for complicated cases. Besides, each sentence in findings usually focuses on single anatomy, so they only need to be matched to corresponding anatomical regions instead of the whole image, which is beneficial for textual and visual features alignment. Therefore, we propose a novel anatomy-enhanced multimodal model to promote impression generation. In detail, we first construct a set of rules to extract anatomies and put these prompts into each sentence to highlight anatomy characteristics. Then, two separate encoders are applied to extract features from the radiograph and findings. Afterward, we utilize a contrastive learning module to align these two representations at the overall level and use a co-attention to fuse them at the sentence level with the help of anatomy-enhanced sentence representation. Finally, the decoder takes the fused information as the input to generate impressions. The experimental results on two benchmark datasets confirm the effectiveness of the proposed method, which achieves state-of-the-art results.
Chain-of-thought reasoning, a cognitive process fundamental to human intelligence, has garnered significant attention in the realm of artificial intelligence and natural language processing. However, there still remains a lack of a comprehensive survey for this arena. To this end, we take the first step and present a thorough survey of this research field carefully and widely. We use X-of-Thought to refer to Chain-of-Thought in a broad sense. In detail, we systematically organize the current research according to the taxonomies of methods, including XoT construction, XoT structure variants, and enhanced XoT. Additionally, we describe XoT with frontier applications, covering planning, tool use, and distillation. Furthermore, we address challenges and discuss some future directions, including faithfulness, multi-modal, and theory. We hope this survey serves as a valuable resource for researchers seeking to innovate within the domain of chain-of-thought reasoning.
Graph neural networks generalize conventional neural networks to graph-structured data and have received widespread attention due to their impressive representation ability. In spite of the remarkable achievements, the performance of Euclidean models in graph-related learning is still bounded and limited by the representation ability of Euclidean geometry, especially for datasets with highly non-Euclidean latent anatomy. Recently, hyperbolic space has gained increasing popularity in processing graph data with tree-like structure and power-law distribution, owing to its exponential growth property. In this survey, we comprehensively revisit the technical details of the current hyperbolic graph neural networks, unifying them into a general framework and summarizing the variants of each component. More importantly, we present various HGNN-related applications. Last, we also identify several challenges, which potentially serve as guidelines for further flourishing the achievements of graph learning in hyperbolic spaces.
Classical machine learning implicitly assumes that labels of the training data are sampled from a clean distribution, which can be too restrictive for real-world scenarios. However, statistical learning-based methods may not train deep learning models robustly with these noisy labels. Therefore, it is urgent to design Label-Noise Representation Learning (LNRL) methods for robustly training deep models with noisy labels. To fully understand LNRL, we conduct a survey study. We first clarify a formal definition for LNRL from the perspective of machine learning. Then, via the lens of learning theory and empirical study, we figure out why noisy labels affect deep models' performance. Based on the theoretical guidance, we categorize different LNRL methods into three directions. Under this unified taxonomy, we provide a thorough discussion of the pros and cons of different categories. More importantly, we summarize the essential components of robust LNRL, which can spark new directions. Lastly, we propose possible research directions within LNRL, such as new datasets, instance-dependent LNRL, and adversarial LNRL. Finally, we envision potential directions beyond LNRL, such as learning with feature-noise, preference-noise, domain-noise, similarity-noise, graph-noise, and demonstration-noise.
For deploying a deep learning model into production, it needs to be both accurate and compact to meet the latency and memory constraints. This usually results in a network that is deep (to ensure performance) and yet thin (to improve computational efficiency). In this paper, we propose an efficient method to train a deep thin network with a theoretic guarantee. Our method is motivated by model compression. It consists of three stages. In the first stage, we sufficiently widen the deep thin network and train it until convergence. In the second stage, we use this well-trained deep wide network to warm up (or initialize) the original deep thin network. This is achieved by letting the thin network imitate the immediate outputs of the wide network from layer to layer. In the last stage, we further fine tune this well initialized deep thin network. The theoretical guarantee is established by using mean field analysis, which shows the advantage of layerwise imitation over traditional training deep thin networks from scratch by backpropagation. We also conduct large-scale empirical experiments to validate our approach. By training with our method, ResNet50 can outperform ResNet101, and BERT_BASE can be comparable with BERT_LARGE, where both the latter models are trained via the standard training procedures as in the literature.
Over the last several years, the field of natural language processing has been propelled forward by an explosion in the use of deep learning models. This survey provides a brief introduction to the field and a quick overview of deep learning architectures and methods. It then sifts through the plethora of recent studies and summarizes a large assortment of relevant contributions. Analyzed research areas include several core linguistic processing issues in addition to a number of applications of computational linguistics. A discussion of the current state of the art is then provided along with recommendations for future research in the field.
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