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Graph neural networks (GNNs) are popular machine learning models for graphs with many applications across scientific domains. However, GNNs are considered black box models, and it is challenging to understand how the model makes predictions. Game theoric Shapley value approaches are popular explanation methods in other domains but are not well-studied for graphs. Some studies have proposed Shapley value based GNN explanations, yet they have several limitations: they consider limited samples to approximate Shapley values; some mainly focus on small and large coalition sizes, and they are an order of magnitude slower than other explanation methods, making them inapplicable to even moderate-size graphs. In this work, we propose GNNShap, which provides explanations for edges since they provide more natural explanations for graphs and more fine-grained explanations. We overcome the limitations by sampling from all coalition sizes, parallelizing the sampling on GPUs, and speeding up model predictions by batching. GNNShap gives better fidelity scores and faster explanations than baselines on real-world datasets. The code is available at //github.com/HipGraph/GNNShap.

Emergency communication is critical but challenging after natural disasters when ground infrastructure is devastated. Unmanned aerial vehicles (UAVs) offer enormous potential for agile relief coordination in these scenarios. However, effectively leveraging UAV fleets poses additional challenges around security, privacy, and efficient collaboration across response agencies. This paper presents a robust blockchain-enabled framework to address these challenges by integrating a consortium blockchain model, smart contracts, and cryptographic techniques to securely coordinate UAV fleets for disaster response. Specifically, we make two key contributions: a consortium blockchain architecture for secure and private multi-agency coordination; and an optimized consensus protocol balancing efficiency and fault tolerance using a delegated proof of stake practical byzantine fault tolerance (DPoS-PBFT). Comprehensive simulations showcase the framework's ability to enhance transparency, automation, scalability, and cyber-attack resilience for UAV coordination in post-disaster networks.

This study introduces a pretrained large language model-based annotation methodology for the first dependency treebank in Ottoman Turkish. Our experimental results show that, iteratively, i) pseudo-annotating data using a multilingual BERT-based parsing model, ii) manually correcting the pseudo-annotations, and iii) fine-tuning the parsing model with the corrected annotations, we speed up and simplify the challenging dependency annotation process. The resulting treebank, that will be a part of the Universal Dependencies (UD) project, will facilitate automated analysis of Ottoman Turkish documents, unlocking the linguistic richness embedded in this historical heritage.

Neural network interatomic potentials (NNIPs) are an attractive alternative to ab-initio methods for molecular dynamics (MD) simulations. However, they can produce unstable simulations which sample unphysical states, limiting their usefulness for modeling phenomena occurring over longer timescales. To address these challenges, we present Stability-Aware Boltzmann Estimator (StABlE) Training, a multi-modal training procedure which combines conventional supervised training from quantum-mechanical energies and forces with reference system observables, to produce stable and accurate NNIPs. StABlE Training iteratively runs MD simulations to seek out unstable regions, and corrects the instabilities via supervision with a reference observable. The training procedure is enabled by the Boltzmann Estimator, which allows efficient computation of gradients required to train neural networks to system observables, and can detect both global and local instabilities. We demonstrate our methodology across organic molecules, tetrapeptides, and condensed phase systems, along with using three modern NNIP architectures. In all three cases, StABlE-trained models achieve significant improvements in simulation stability and recovery of structural and dynamic observables. In some cases, StABlE-trained models outperform conventional models trained on datasets 50 times larger. As a general framework applicable across NNIP architectures and systems, StABlE Training is a powerful tool for training stable and accurate NNIPs, particularly in the absence of large reference datasets.

Spiking neural networks (SNNs) offer a promising avenue to implement deep neural networks in a more energy-efficient way. However, the network architectures of existing SNNs for language tasks are still simplistic and relatively shallow, and deep architectures have not been fully explored, resulting in a significant performance gap compared to mainstream transformer-based networks such as BERT. To this end, we improve a recently-proposed spiking Transformer (i.e., Spikformer) to make it possible to process language tasks and propose a two-stage knowledge distillation method for training it, which combines pre-training by distilling knowledge from BERT with a large collection of unlabelled texts and fine-tuning with task-specific instances via knowledge distillation again from the BERT fine-tuned on the same training examples. Through extensive experimentation, we show that the models trained with our method, named SpikeBERT, outperform state-of-the-art SNNs and even achieve comparable results to BERTs on text classification tasks for both English and Chinese with much less energy consumption. Our code is available at //github.com/Lvchangze/SpikeBERT.

Recent artificial intelligence (AI) systems have reached milestones in "grand challenges" ranging from Go to protein-folding. The capability to retrieve medical knowledge, reason over it, and answer medical questions comparably to physicians has long been viewed as one such grand challenge. Large language models (LLMs) have catalyzed significant progress in medical question answering; Med-PaLM was the first model to exceed a "passing" score in US Medical Licensing Examination (USMLE) style questions with a score of 67.2% on the MedQA dataset. However, this and other prior work suggested significant room for improvement, especially when models' answers were compared to clinicians' answers. Here we present Med-PaLM 2, which bridges these gaps by leveraging a combination of base LLM improvements (PaLM 2), medical domain finetuning, and prompting strategies including a novel ensemble refinement approach. Med-PaLM 2 scored up to 86.5% on the MedQA dataset, improving upon Med-PaLM by over 19% and setting a new state-of-the-art. We also observed performance approaching or exceeding state-of-the-art across MedMCQA, PubMedQA, and MMLU clinical topics datasets. We performed detailed human evaluations on long-form questions along multiple axes relevant to clinical applications. In pairwise comparative ranking of 1066 consumer medical questions, physicians preferred Med-PaLM 2 answers to those produced by physicians on eight of nine axes pertaining to clinical utility (p < 0.001). We also observed significant improvements compared to Med-PaLM on every evaluation axis (p < 0.001) on newly introduced datasets of 240 long-form "adversarial" questions to probe LLM limitations. While further studies are necessary to validate the efficacy of these models in real-world settings, these results highlight rapid progress towards physician-level performance in medical question answering.

Most recent semantic segmentation methods adopt a fully-convolutional network (FCN) with an encoder-decoder architecture. The encoder progressively reduces the spatial resolution and learns more abstract/semantic visual concepts with larger receptive fields. Since context modeling is critical for segmentation, the latest efforts have been focused on increasing the receptive field, through either dilated/atrous convolutions or inserting attention modules. However, the encoder-decoder based FCN architecture remains unchanged. In this paper, we aim to provide an alternative perspective by treating semantic segmentation as a sequence-to-sequence prediction task. Specifically, we deploy a pure transformer (ie, without convolution and resolution reduction) to encode an image as a sequence of patches. With the global context modeled in every layer of the transformer, this encoder can be combined with a simple decoder to provide a powerful segmentation model, termed SEgmentation TRansformer (SETR). Extensive experiments show that SETR achieves new state of the art on ADE20K (50.28% mIoU), Pascal Context (55.83% mIoU) and competitive results on Cityscapes. Particularly, we achieve the first (44.42% mIoU) position in the highly competitive ADE20K test server leaderboard.

Translational distance-based knowledge graph embedding has shown progressive improvements on the link prediction task, from TransE to the latest state-of-the-art RotatE. However, N-1, 1-N and N-N predictions still remain challenging. In this work, we propose a novel translational distance-based approach for knowledge graph link prediction. The proposed method includes two-folds, first we extend the RotatE from 2D complex domain to high dimension space with orthogonal transforms to model relations for better modeling capacity. Second, the graph context is explicitly modeled via two directed context representations. These context representations are used as part of the distance scoring function to measure the plausibility of the triples during training and inference. The proposed approach effectively improves prediction accuracy on the difficult N-1, 1-N and N-N cases for knowledge graph link prediction task. The experimental results show that it achieves better performance on two benchmark data sets compared to the baseline RotatE, especially on data set (FB15k-237) with many high in-degree connection nodes.

Deep neural networks (DNNs) are successful in many computer vision tasks. However, the most accurate DNNs require millions of parameters and operations, making them energy, computation and memory intensive. This impedes the deployment of large DNNs in low-power devices with limited compute resources. Recent research improves DNN models by reducing the memory requirement, energy consumption, and number of operations without significantly decreasing the accuracy. This paper surveys the progress of low-power deep learning and computer vision, specifically in regards to inference, and discusses the methods for compacting and accelerating DNN models. The techniques can be divided into four major categories: (1) parameter quantization and pruning, (2) compressed convolutional filters and matrix factorization, (3) network architecture search, and (4) knowledge distillation. We analyze the accuracy, advantages, disadvantages, and potential solutions to the problems with the techniques in each category. We also discuss new evaluation metrics as a guideline for future research.

Deep convolutional neural networks (CNNs) have recently achieved great success in many visual recognition tasks. However, existing deep neural network models are computationally expensive and memory intensive, hindering their deployment in devices with low memory resources or in applications with strict latency requirements. Therefore, a natural thought is to perform model compression and acceleration in deep networks without significantly decreasing the model performance. During the past few years, tremendous progress has been made in this area. In this paper, we survey the recent advanced techniques for compacting and accelerating CNNs model developed. These techniques are roughly categorized into four schemes: parameter pruning and sharing, low-rank factorization, transferred/compact convolutional filters, and knowledge distillation. Methods of parameter pruning and sharing will be described at the beginning, after that the other techniques will be introduced. For each scheme, we provide insightful analysis regarding the performance, related applications, advantages, and drawbacks etc. Then we will go through a few very recent additional successful methods, for example, dynamic capacity networks and stochastic depths networks. After that, we survey the evaluation matrix, the main datasets used for evaluating the model performance and recent benchmarking efforts. Finally, we conclude this paper, discuss remaining challenges and possible directions on this topic.