Bayesian nonparametric mixture models offer a rich framework for model based clustering. We consider the situation where the kernel of the mixture is available only up to an intractable normalizing constant. In this case, most of the commonly used Markov chain Monte Carlo (MCMC) methods are not suitable. We propose an approximate Bayesian computational (ABC) strategy, whereby we approximate the posterior to avoid the intractability of the kernel. We derive an ABC-MCMC algorithm which combines (i) the use of the predictive distribution induced by the nonparametric prior as proposal and (ii) the use of the Wasserstein distance and its connection to optimal matching problems. To overcome the sensibility with respect to the parameters of our algorithm, we further propose an adaptive strategy. We illustrate the use of the proposed algorithm with several simulation studies and an application on real data, where we cluster a population of networks, comparing its performance with standard MCMC algorithms and validating the adaptive strategy.
Bisimulation metrics define a distance measure between states of a Markov decision process (MDP) based on a comparison of reward sequences. Due to this property they provide theoretical guarantees in value function approximation. In this work we first prove that bisimulation metrics can be defined via any $p$-Wasserstein metric for $p\geq 1$. Then we describe an approximate policy iteration (API) procedure that uses $\epsilon$-aggregation with $\pi$-bisimulation and prove performance bounds for continuous state spaces. We bound the difference between $\pi$-bisimulation metrics in terms of the change in the policies themselves. Based on these theoretical results, we design an API($\alpha$) procedure that employs conservative policy updates and enjoys better performance bounds than the naive API approach. In addition, we propose a novel trust region approach which circumvents the requirement to explicitly solve a constrained optimization problem. Finally, we provide experimental evidence of improved stability compared to non-conservative alternatives in simulated continuous control.
In this paper, we consider the problem of black-box optimization using Gaussian Process (GP) bandit optimization with a small number of batches. Assuming the unknown function has a low norm in the Reproducing Kernel Hilbert Space (RKHS), we introduce a batch algorithm inspired by batched finite-arm bandit algorithms, and show that it achieves the cumulative regret upper bound $O^\ast(\sqrt{T\gamma_T})$ using $O(\log\log T)$ batches within time horizon $T$, where the $O^\ast(\cdot)$ notation hides dimension-independent logarithmic factors and $\gamma_T$ is the maximum information gain associated with the kernel. This bound is near-optimal for several kernels of interest and improves on the typical $O^\ast(\sqrt{T}\gamma_T)$ bound, and our approach is arguably the simplest among algorithms attaining this improvement. In addition, in the case of a constant number of batches (not depending on $T$), we propose a modified version of our algorithm, and characterize how the regret is impacted by the number of batches, focusing on the squared exponential and Mat\'ern kernels. The algorithmic upper bounds are shown to be nearly minimax optimal via analogous algorithm-independent lower bounds.
Bayesian nonparametric methods are a popular choice for analysing survival data due to their ability to flexibly model the distribution of survival times. These methods typically employ a nonparametric prior on the survival function that is conjugate with respect to right-censored data. Eliciting these priors, particularly in the presence of covariates, can be challenging and inference typically relies on computationally intensive Markov chain Monte Carlo schemes. In this paper, we build on recent work that recasts Bayesian inference as assigning a predictive distribution on the unseen values of a population conditional on the observed samples, thus avoiding the need to specify a complex prior. We describe a copula-based predictive update which admits a scalable sequential importance sampling algorithm to perform inference that properly accounts for right-censoring. We provide theoretical justification through an extension of Doob's consistency theorem and illustrate the method on a number of simulated and real data sets, including an example with covariates. Our approach enables analysts to perform Bayesian nonparametric inference through only the specification of a predictive distribution.
We consider Ising models on the hypercube with a general interaction matrix $J$, and give a polynomial time sampling algorithm when all but $O(1)$ eigenvalues of $J$ lie in an interval of length one, a situation which occurs in many models of interest. This was previously known for the Glauber dynamics when *all* eigenvalues fit in an interval of length one; however, a single outlier can force the Glauber dynamics to mix torpidly. Our general result implies the first polynomial time sampling algorithms for low-rank Ising models such as Hopfield networks with a fixed number of patterns and Bayesian clustering models with low-dimensional contexts, and greatly improves the polynomial time sampling regime for the antiferromagnetic/ferromagnetic Ising model with inconsistent field on expander graphs. It also improves on previous approximation algorithm results based on the naive mean-field approximation in variational methods and statistical physics. Our approach is based on a new fusion of ideas from the MCMC and variational inference worlds. As part of our algorithm, we define a new nonconvex variational problem which allows us to sample from an exponential reweighting of a distribution by a negative definite quadratic form, and show how to make this procedure provably efficient using stochastic gradient descent. On top of this, we construct a new simulated tempering chain (on an extended state space arising from the Hubbard-Stratonovich transform) which overcomes the obstacle posed by large positive eigenvalues, and combine it with the SGD-based sampler to solve the full problem.
Model-based methods for recommender systems have been studied extensively for years. Modern recommender systems usually resort to 1) representation learning models which define user-item preference as the distance between their embedding representations, and 2) embedding-based Approximate Nearest Neighbor (ANN) search to tackle the efficiency problem introduced by large-scale corpus. While providing efficient retrieval, the embedding-based retrieval pattern also limits the model capacity since the form of user-item preference measure is restricted to the distance between their embedding representations. However, for other more precise user-item preference measures, e.g., preference scores directly derived from a deep neural network, they are computationally intractable because of the lack of an efficient retrieval method, and an exhaustive search for all user-item pairs is impractical. In this paper, we propose a novel method to extend ANN search to arbitrary matching functions, e.g., a deep neural network. Our main idea is to perform a greedy walk with a matching function in a similarity graph constructed from all items. To solve the problem that the similarity measures of graph construction and user-item matching function are heterogeneous, we propose a pluggable adversarial training task to ensure the graph search with arbitrary matching function can achieve fairly high precision. Experimental results in both open source and industry datasets demonstrate the effectiveness of our method. The proposed method has been fully deployed in the Taobao display advertising platform and brings a considerable advertising revenue increase. We also summarize our detailed experiences in deployment in this paper.
Counterfactual explanations are usually generated through heuristics that are sensitive to the search's initial conditions. The absence of guarantees of performance and robustness hinders trustworthiness. In this paper, we take a disciplined approach towards counterfactual explanations for tree ensembles. We advocate for a model-based search aiming at "optimal" explanations and propose efficient mixed-integer programming approaches. We show that isolation forests can be modeled within our framework to focus the search on plausible explanations with a low outlier score. We provide comprehensive coverage of additional constraints that model important objectives, heterogeneous data types, structural constraints on the feature space, along with resource and actionability restrictions. Our experimental analyses demonstrate that the proposed search approach requires a computational effort that is orders of magnitude smaller than previous mathematical programming algorithms. It scales up to large data sets and tree ensembles, where it provides, within seconds, systematic explanations grounded on well-defined models solved to optimality.
Sampling methods (e.g., node-wise, layer-wise, or subgraph) has become an indispensable strategy to speed up training large-scale Graph Neural Networks (GNNs). However, existing sampling methods are mostly based on the graph structural information and ignore the dynamicity of optimization, which leads to high variance in estimating the stochastic gradients. The high variance issue can be very pronounced in extremely large graphs, where it results in slow convergence and poor generalization. In this paper, we theoretically analyze the variance of sampling methods and show that, due to the composite structure of empirical risk, the variance of any sampling method can be decomposed into \textit{embedding approximation variance} in the forward stage and \textit{stochastic gradient variance} in the backward stage that necessities mitigating both types of variance to obtain faster convergence rate. We propose a decoupled variance reduction strategy that employs (approximate) gradient information to adaptively sample nodes with minimal variance, and explicitly reduces the variance introduced by embedding approximation. We show theoretically and empirically that the proposed method, even with smaller mini-batch sizes, enjoys a faster convergence rate and entails a better generalization compared to the existing methods.
This work focuses on combining nonparametric topic models with Auto-Encoding Variational Bayes (AEVB). Specifically, we first propose iTM-VAE, where the topics are treated as trainable parameters and the document-specific topic proportions are obtained by a stick-breaking construction. The inference of iTM-VAE is modeled by neural networks such that it can be computed in a simple feed-forward manner. We also describe how to introduce a hyper-prior into iTM-VAE so as to model the uncertainty of the prior parameter. Actually, the hyper-prior technique is quite general and we show that it can be applied to other AEVB based models to alleviate the {\it collapse-to-prior} problem elegantly. Moreover, we also propose HiTM-VAE, where the document-specific topic distributions are generated in a hierarchical manner. HiTM-VAE is even more flexible and can generate topic distributions with better variability. Experimental results on 20News and Reuters RCV1-V2 datasets show that the proposed models outperform the state-of-the-art baselines significantly. The advantages of the hyper-prior technique and the hierarchical model construction are also confirmed by experiments.
We propose a new method of estimation in topic models, that is not a variation on the existing simplex finding algorithms, and that estimates the number of topics K from the observed data. We derive new finite sample minimax lower bounds for the estimation of A, as well as new upper bounds for our proposed estimator. We describe the scenarios where our estimator is minimax adaptive. Our finite sample analysis is valid for any number of documents (n), individual document length (N_i), dictionary size (p) and number of topics (K), and both p and K are allowed to increase with n, a situation not handled well by previous analyses. We complement our theoretical results with a detailed simulation study. We illustrate that the new algorithm is faster and more accurate than the current ones, although we start out with a computational and theoretical disadvantage of not knowing the correct number of topics K, while we provide the competing methods with the correct value in our simulations.
In this paper, we study the optimal convergence rate for distributed convex optimization problems in networks. We model the communication restrictions imposed by the network as a set of affine constraints and provide optimal complexity bounds for four different setups, namely: the function $F(\xb) \triangleq \sum_{i=1}^{m}f_i(\xb)$ is strongly convex and smooth, either strongly convex or smooth or just convex. Our results show that Nesterov's accelerated gradient descent on the dual problem can be executed in a distributed manner and obtains the same optimal rates as in the centralized version of the problem (up to constant or logarithmic factors) with an additional cost related to the spectral gap of the interaction matrix. Finally, we discuss some extensions to the proposed setup such as proximal friendly functions, time-varying graphs, improvement of the condition numbers.