Robotic ultrasound (US) systems have shown great potential to make US examinations easier and more accurate. Recently, various machine learning techniques have been proposed to realize automatic US image interpretation for robotic US acquisition tasks. However, obtaining large amounts of real US imaging data for training is usually expensive or even unfeasible in some clinical applications. An alternative is to build a simulator to generate synthetic US data for training, but the differences between simulated and real US images may result in poor model performance. This work presents a Sim2Real framework to efficiently learn robotic US image analysis tasks based only on simulated data for real-world deployment. A style transfer module is proposed based on unsupervised contrastive learning and used as a preprocessing step to convert the real US images into the simulation style. Thereafter, a task-relevant model is designed to combine CNNs with vision transformers to generate the task-dependent prediction with improved generalization ability. We demonstrate the effectiveness of our method in an image regression task to predict the probe position based on US images in robotic transesophageal echocardiography (TEE). Our results show that using only simulated US data and a small amount of unlabelled real data for training, our method can achieve comparable performance to semi-supervised and fully supervised learning methods. Moreover, the effectiveness of our previously proposed CT-based US image simulation method is also indirectly confirmed.
A networked time series (NETS) is a family of time series on a given graph, one for each node. It has found a wide range of applications from intelligent transportation, environment monitoring to mobile network management. An important task in such applications is to predict the future values of a NETS based on its historical values and the underlying graph. Most existing methods require complete data for training. However, in real-world scenarios, it is not uncommon to have missing data due to sensor malfunction, incomplete sensing coverage, etc. In this paper, we study the problem of NETS prediction with incomplete data. We propose NETS-ImpGAN, a novel deep learning framework that can be trained on incomplete data with missing values in both history and future. Furthermore, we propose novel Graph Temporal Attention Networks by incorporating the attention mechanism to capture both inter-time series correlations and temporal correlations. We conduct extensive experiments on three real-world datasets under different missing patterns and missing rates. The experimental results show that NETS-ImpGAN outperforms existing methods except when data exhibit very low variance, in which case NETS-ImpGAN still achieves competitive performance.
In recent years, by leveraging more data, computation, and diverse tasks, learned optimizers have achieved remarkable success in supervised learning, outperforming classical hand-designed optimizers. Reinforcement learning (RL) is essentially different from supervised learning and in practice these learned optimizers do not work well even in simple RL tasks. We investigate this phenomenon and identity three issues. First, the gradients of an RL agent vary across a wide range in logarithms while their absolute values are in a small range, making neural networks hard to obtain accurate parameter updates. Second, the agent-gradient distribution is non-independent and identically distributed, leading to inefficient meta-training. Finally, due to highly stochastic agent-environment interactions, the agent-gradients have high bias and variance, which increase the difficulty of learning an optimizer for RL. We propose gradient processing, pipeline training, and a novel optimizer structure with good inductive bias to address these issues. By applying these techniques, for the first time, we show that learning an optimizer for RL from scratch is possible. Although only trained in toy tasks, our learned optimizer can generalize to unseen complex tasks in Brax.
Dictionary learning is an effective tool for pattern recognition and classification of time series data. Among various dictionary learning techniques, the dynamic time warping (DTW) is commonly used for dealing with temporal delays, scaling, transformation, and many other kinds of temporal misalignments issues. However, the DTW suffers overfitting or information loss due to its discrete nature in aligning time series data. To address this issue, we propose a generalized time warping invariant dictionary learning algorithm in this paper. Our approach features a generalized time warping operator, which consists of linear combinations of continuous basis functions for facilitating continuous temporal warping. The integration of the proposed operator and the dictionary learning is formulated as an optimization problem, where the block coordinate descent method is employed to jointly optimize warping paths, dictionaries, and sparseness coefficients. The optimized results are then used as hyperspace distance measures to feed classification and clustering algorithms. The superiority of the proposed method in terms of dictionary learning, classification, and clustering is validated through ten sets of public datasets in comparing with various benchmark methods.
Theoretical studies on transfer learning or domain adaptation have so far focused on situations with a known hypothesis class or model; however in practice, some amount of model selection is usually involved, often appearing under the umbrella term of hyperparameter-tuning: for example, one may think of the problem of tuning for the right neural network architecture towards a target task, while leveraging data from a related source task. Now, in addition to the usual tradeoffs on approximation vs estimation errors involved in model selection, this problem brings in a new complexity term, namely, the transfer distance between source and target distributions, which is known to vary with the choice of hypothesis class. We present a first study of this problem, focusing on classification; in particular, the analysis reveals some remarkable phenomena: adaptive rates, i.e., those achievable with no distributional information, can be arbitrarily slower than oracle rates, i.e., when given knowledge on distances.
Class-incremental learning aims to learn new classes in an incremental fashion without forgetting the previously learned ones. Several research works have shown how additional data can be used by incremental models to help mitigate catastrophic forgetting. In this work, following the recent breakthrough in text-to-image generative models and their wide distribution, we propose the use of a pretrained Stable Diffusion model as a source of additional data for class-incremental learning. Compared to competitive methods that rely on external, often unlabeled, datasets of real images, our approach can generate synthetic samples belonging to the same classes as the previously encountered images. This allows us to use those additional data samples not only in the distillation loss but also for replay in the classification loss. Experiments on the competitive benchmarks CIFAR100, ImageNet-Subset, and ImageNet demonstrate how this new approach can be used to further improve the performance of state-of-the-art methods for class-incremental learning on large scale datasets.
Recent work has demonstrated that using parameter efficient tuning techniques such as prefix tuning (or P-tuning) on pretrained language models can yield performance that is comparable or superior to fine-tuning while dramatically reducing trainable parameters. Nevertheless, the effectiveness of such methods under the context of data augmentation, a common strategy to improve learning under low data regimes, has not been fully explored. In this paper, we examine the effectiveness of several popular task-agnostic data augmentation techniques, i.e., EDA, Back Translation, and Mixup, when using two general parameter efficient tuning methods, P-tuning v2 and LoRA, under data scarcity. We show that data augmentation can be used to boost the performance of P-tuning and LoRA models, but the effectiveness of each technique varies and certain methods can lead to a notable degradation in performance, particularly when using larger models and on harder tasks. We further analyze the sentence representations of P-tuning compared to fine-tuning to help understand the above behaviour, and reveal how P-tuning generally presents a more limited ability to separate the sentence embeddings from different classes of augmented data. In addition, it displays poorer performance on heavily altered data. However, we demonstrate that by adding a simple contrastive loss function it can help mitigate such issues for prefix tuning, resulting in sizable improvements to augmented data performance.
The deep learning technique has been shown to be effectively addressed several image analysis tasks in the computer-aided diagnosis scheme for mammography. The training of an efficacious deep learning model requires large data with diverse styles and qualities. The diversity of data often comes from the use of various scanners of vendors. But, in practice, it is impractical to collect a sufficient amount of diverse data for training. To this end, a novel contrastive learning is developed to equip the deep learning models with better style generalization capability. Specifically, the multi-style and multi-view unsupervised self-learning scheme is carried out to seek robust feature embedding against style diversity as a pretrained model. Afterward, the pretrained network is further fine-tuned to the downstream tasks, e.g., mass detection, matching, BI-RADS rating, and breast density classification. The proposed method has been evaluated extensively and rigorously with mammograms from various vendor style domains and several public datasets. The experimental results suggest that the proposed domain generalization method can effectively improve performance of four mammographic image tasks on the data from both seen and unseen domains, and outperform many state-of-the-art (SOTA) generalization methods.
Breast cancer remains a global challenge, causing over 1 million deaths globally in 2018. To achieve earlier breast cancer detection, screening x-ray mammography is recommended by health organizations worldwide and has been estimated to decrease breast cancer mortality by 20-40%. Nevertheless, significant false positive and false negative rates, as well as high interpretation costs, leave opportunities for improving quality and access. To address these limitations, there has been much recent interest in applying deep learning to mammography; however, obtaining large amounts of annotated data poses a challenge for training deep learning models for this purpose, as does ensuring generalization beyond the populations represented in the training dataset. Here, we present an annotation-efficient deep learning approach that 1) achieves state-of-the-art performance in mammogram classification, 2) successfully extends to digital breast tomosynthesis (DBT; "3D mammography"), 3) detects cancers in clinically-negative prior mammograms of cancer patients, 4) generalizes well to a population with low screening rates, and 5) outperforms five-out-of-five full-time breast imaging specialists by improving absolute sensitivity by an average of 14%. Our results demonstrate promise towards software that can improve the accuracy of and access to screening mammography worldwide.
Time Series Classification (TSC) is an important and challenging problem in data mining. With the increase of time series data availability, hundreds of TSC algorithms have been proposed. Among these methods, only a few have considered Deep Neural Networks (DNNs) to perform this task. This is surprising as deep learning has seen very successful applications in the last years. DNNs have indeed revolutionized the field of computer vision especially with the advent of novel deeper architectures such as Residual and Convolutional Neural Networks. Apart from images, sequential data such as text and audio can also be processed with DNNs to reach state-of-the-art performance for document classification and speech recognition. In this article, we study the current state-of-the-art performance of deep learning algorithms for TSC by presenting an empirical study of the most recent DNN architectures for TSC. We give an overview of the most successful deep learning applications in various time series domains under a unified taxonomy of DNNs for TSC. We also provide an open source deep learning framework to the TSC community where we implemented each of the compared approaches and evaluated them on a univariate TSC benchmark (the UCR/UEA archive) and 12 multivariate time series datasets. By training 8,730 deep learning models on 97 time series datasets, we propose the most exhaustive study of DNNs for TSC to date.
Most existing works in visual question answering (VQA) are dedicated to improving the accuracy of predicted answers, while disregarding the explanations. We argue that the explanation for an answer is of the same or even more importance compared with the answer itself, since it makes the question and answering process more understandable and traceable. To this end, we propose a new task of VQA-E (VQA with Explanation), where the computational models are required to generate an explanation with the predicted answer. We first construct a new dataset, and then frame the VQA-E problem in a multi-task learning architecture. Our VQA-E dataset is automatically derived from the VQA v2 dataset by intelligently exploiting the available captions. We have conducted a user study to validate the quality of explanations synthesized by our method. We quantitatively show that the additional supervision from explanations can not only produce insightful textual sentences to justify the answers, but also improve the performance of answer prediction. Our model outperforms the state-of-the-art methods by a clear margin on the VQA v2 dataset.