Digital image correlation (DIC) has become an industry standard to retrieve accurate displacement and strain measurement in tensile testing and other material characterization. Though traditional DIC offers a high precision estimation of deformation for general tensile testing cases, the prediction becomes unstable at large deformation or when the speckle patterns start to tear. In addition, traditional DIC requires a long computation time and often produces a low spatial resolution output affected by filtering and speckle pattern quality. To address these challenges, we propose a new deep learning-based DIC approach--Deep DIC, in which two convolutional neural networks, DisplacementNet and StrainNet, are designed to work together for end-to-end prediction of displacements and strains. DisplacementNet predicts the displacement field and adaptively tracks a region of interest. StrainNet predicts the strain field directly from the image input without relying on the displacement prediction, which significantly improves the strain prediction accuracy. A new dataset generation method is developed to synthesize a realistic and comprehensive dataset, including the generation of speckle patterns and the deformation of the speckle image with synthetic displacement fields. Though trained on synthetic datasets only, Deep DIC gives highly consistent and comparable predictions of displacement and strain with those obtained from commercial DIC software for real experiments, while it outperforms commercial software with very robust strain prediction even at large and localized deformation and varied pattern qualities. In addition, Deep DIC is capable of real-time prediction of deformation with a calculation time down to milliseconds.
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Light field imaging introduced the capability to refocus an image after capturing. Currently there are two popular methods for refocusing, shift-and-sum and Fourier slice methods. Neither of these two methods can refocus the light field in real-time without any pre-processing. In this paper we introduce a machine learning based refocusing technique that is capable of extracting 16 refocused images with refocusing parameters of \alpha=0.125,0.250,0.375,...,2.0 in real-time. We have trained our network, which is called RefNet, in two experiments. Once using the Fourier slice method as the training -- i.e., "ground truth" -- data and another using the shift-and-sum method as the training data. We showed that in both cases, not only is the RefNet method at least 134x faster than previous approaches, but also the color prediction of RefNet is superior to both Fourier slice and shift-and-sum methods while having similar depth of field and focus distance performance.
The shift towards end-to-end deep learning has brought unprecedented advances in many areas of computer vision. However, deep neural networks are trained on images with resolutions that rarely exceed $1,000 \times 1,000$ pixels. The growing use of scanners that create images with extremely high resolutions (average can be $100,000 \times 100,000$ pixels) thereby presents novel challenges to the field. Most of the published methods preprocess high-resolution images into a set of smaller patches, imposing an a priori belief on the best properties of the extracted patches (magnification, field of view, location, etc.). Herein, we introduce Magnifying Networks (MagNets) as an alternative deep learning solution for gigapixel image analysis that does not rely on a preprocessing stage nor requires the processing of billions of pixels. MagNets can learn to dynamically retrieve any part of a gigapixel image, at any magnification level and field of view, in an end-to-end fashion with minimal ground truth (a single global, slide-level label). Our results on the publicly available Camelyon16 and Camelyon17 datasets corroborate to the effectiveness and efficiency of MagNets and the proposed optimization framework for whole slide image classification. Importantly, MagNets process far less patches from each slide than any of the existing approaches ($10$ to $300$ times less).
The accurate diagnosis and molecular profiling of colorectal cancers are critical for planning the best treatment options for patients. Microsatellite instability (MSI) or mismatch repair (MMR) status plays a vital role inappropriate treatment selection, has prognostic implications and is used to investigate the possibility of patients having underlying genetic disorders (Lynch syndrome). NICE recommends that all CRC patients should be offered MMR/microsatellite instability (MSI) testing. Immunohistochemistry is commonly used to assess MMR status with subsequent molecular testing performed as required. This incurs significant extra costs and requires additional resources. The introduction of automated methods that can predict MSI or MMR status from a target image could substantially reduce the cost associated with MMR testing. Unlike previous studies on MSI prediction involving training a CNN using coarse labels (Microsatellite Instable vs Microsatellite Stable), we have utilised fine-grain MMR labels for training purposes. In this paper, we present our work on predicting MSI status in a two-stage process using a single target slide either stained with CK8/18 or H\&E. First, we trained a multi-headed convolutional neural network model where each head was responsible for predicting one of the MMR protein expressions. To this end, we performed the registration of MMR stained slides to the target slide as a pre-processing step. In the second stage, statistical features computed from the MMR prediction maps were used for the final MSI prediction. Our results demonstrated that MSI classification can be improved by incorporating fine-grained MMR labels in comparison to the previous approaches in which only coarse labels were utilised.
Language models (LMs) significantly improve the recognition accuracy of end-to-end (E2E) models on words rarely seen during training, when used in either the shallow fusion or the rescoring setups. In this work, we introduce LMs in the learning of hybrid autoregressive transducer (HAT) models in the discriminative training framework, to mitigate the training versus inference gap regarding the use of LMs. For the shallow fusion setup, we use LMs during both hypotheses generation and loss computation, and the LM-aware MWER-trained model achieves 10\% relative improvement over the model trained with standard MWER on voice search test sets containing rare words. For the rescoring setup, we learn a small neural module to generate per-token fusion weights in a data-dependent manner. This model achieves the same rescoring WER as regular MWER-trained model, but without the need for sweeping fusion weights.
Deep Learning has implemented a wide range of applications and has become increasingly popular in recent years. The goal of multimodal deep learning is to create models that can process and link information using various modalities. Despite the extensive development made for unimodal learning, it still cannot cover all the aspects of human learning. Multimodal learning helps to understand and analyze better when various senses are engaged in the processing of information. This paper focuses on multiple types of modalities, i.e., image, video, text, audio, body gestures, facial expressions, and physiological signals. Detailed analysis of past and current baseline approaches and an in-depth study of recent advancements in multimodal deep learning applications has been provided. A fine-grained taxonomy of various multimodal deep learning applications is proposed, elaborating on different applications in more depth. Architectures and datasets used in these applications are also discussed, along with their evaluation metrics. Last, main issues are highlighted separately for each domain along with their possible future research directions.
Deep learning is usually described as an experiment-driven field under continuous criticizes of lacking theoretical foundations. This problem has been partially fixed by a large volume of literature which has so far not been well organized. This paper reviews and organizes the recent advances in deep learning theory. The literature is categorized in six groups: (1) complexity and capacity-based approaches for analyzing the generalizability of deep learning; (2) stochastic differential equations and their dynamic systems for modelling stochastic gradient descent and its variants, which characterize the optimization and generalization of deep learning, partially inspired by Bayesian inference; (3) the geometrical structures of the loss landscape that drives the trajectories of the dynamic systems; (4) the roles of over-parameterization of deep neural networks from both positive and negative perspectives; (5) theoretical foundations of several special structures in network architectures; and (6) the increasingly intensive concerns in ethics and security and their relationships with generalizability.
Image segmentation is a key topic in image processing and computer vision with applications such as scene understanding, medical image analysis, robotic perception, video surveillance, augmented reality, and image compression, among many others. Various algorithms for image segmentation have been developed in the literature. Recently, due to the success of deep learning models in a wide range of vision applications, there has been a substantial amount of works aimed at developing image segmentation approaches using deep learning models. In this survey, we provide a comprehensive review of the literature at the time of this writing, covering a broad spectrum of pioneering works for semantic and instance-level segmentation, including fully convolutional pixel-labeling networks, encoder-decoder architectures, multi-scale and pyramid based approaches, recurrent networks, visual attention models, and generative models in adversarial settings. We investigate the similarity, strengths and challenges of these deep learning models, examine the most widely used datasets, report performances, and discuss promising future research directions in this area.
In recent years, disinformation including fake news, has became a global phenomenon due to its explosive growth, particularly on social media. The wide spread of disinformation and fake news can cause detrimental societal effects. Despite the recent progress in detecting disinformation and fake news, it is still non-trivial due to its complexity, diversity, multi-modality, and costs of fact-checking or annotation. The goal of this chapter is to pave the way for appreciating the challenges and advancements via: (1) introducing the types of information disorder on social media and examine their differences and connections; (2) describing important and emerging tasks to combat disinformation for characterization, detection and attribution; and (3) discussing a weak supervision approach to detect disinformation with limited labeled data. We then provide an overview of the chapters in this book that represent the recent advancements in three related parts: (1) user engagements in the dissemination of information disorder; (2) techniques on detecting and mitigating disinformation; and (3) trending issues such as ethics, blockchain, clickbaits, etc. We hope this book to be a convenient entry point for researchers, practitioners, and students to understand the problems and challenges, learn state-of-the-art solutions for their specific needs, and quickly identify new research problems in their domains.
Recent advances in 3D fully convolutional networks (FCN) have made it feasible to produce dense voxel-wise predictions of volumetric images. In this work, we show that a multi-class 3D FCN trained on manually labeled CT scans of several anatomical structures (ranging from the large organs to thin vessels) can achieve competitive segmentation results, while avoiding the need for handcrafting features or training class-specific models. To this end, we propose a two-stage, coarse-to-fine approach that will first use a 3D FCN to roughly define a candidate region, which will then be used as input to a second 3D FCN. This reduces the number of voxels the second FCN has to classify to ~10% and allows it to focus on more detailed segmentation of the organs and vessels. We utilize training and validation sets consisting of 331 clinical CT images and test our models on a completely unseen data collection acquired at a different hospital that includes 150 CT scans, targeting three anatomical organs (liver, spleen, and pancreas). In challenging organs such as the pancreas, our cascaded approach improves the mean Dice score from 68.5 to 82.2%, achieving the highest reported average score on this dataset. We compare with a 2D FCN method on a separate dataset of 240 CT scans with 18 classes and achieve a significantly higher performance in small organs and vessels. Furthermore, we explore fine-tuning our models to different datasets. Our experiments illustrate the promise and robustness of current 3D FCN based semantic segmentation of medical images, achieving state-of-the-art results. Our code and trained models are available for download: //github.com/holgerroth/3Dunet_abdomen_cascade.
Image segmentation is considered to be one of the critical tasks in hyperspectral remote sensing image processing. Recently, convolutional neural network (CNN) has established itself as a powerful model in segmentation and classification by demonstrating excellent performances. The use of a graphical model such as a conditional random field (CRF) contributes further in capturing contextual information and thus improving the segmentation performance. In this paper, we propose a method to segment hyperspectral images by considering both spectral and spatial information via a combined framework consisting of CNN and CRF. We use multiple spectral cubes to learn deep features using CNN, and then formulate deep CRF with CNN-based unary and pairwise potential functions to effectively extract the semantic correlations between patches consisting of three-dimensional data cubes. Effective piecewise training is applied in order to avoid the computationally expensive iterative CRF inference. Furthermore, we introduce a deep deconvolution network that improves the segmentation masks. We also introduce a new dataset and experimented our proposed method on it along with several widely adopted benchmark datasets to evaluate the effectiveness of our method. By comparing our results with those from several state-of-the-art models, we show the promising potential of our method.
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