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A barrier certificate, defined over the states of a dynamical system, is a real-valued function whose zero level set characterizes an inductively verifiable state invariant separating reachable states from unsafe ones. When combined with powerful decision procedures such as sum-of-squares programming (SOS) or satisfiability-modulo-theory solvers (SMT) barrier certificates enable an automated deductive verification approach to safety. The barrier certificate approach has been extended to refute omega-regular specifications by separating consecutive transitions of omega-automata in the hope of denying all accepting runs. Unsurprisingly, such tactics are bound to be conservative as refutation of recurrence properties requires reasoning about the well-foundedness of the transitive closure of the transition relation. This paper introduces the notion of closure certificates as a natural extension of barrier certificates from state invariants to transition invariants. We provide SOS and SMT based characterization for automating the search of closure certificates and demonstrate their effectiveness via a paradigmatic case study.

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Automator是蘋果公司為他們的Mac OS X系統開發的一款軟件。 只要通過點擊拖拽鼠標等操作就可以將一系列動作組合成一個工作流,從而幫助你自動的(可重復的)完成一些復雜的工作。Automator還能橫跨很多不同種類的程序,包括:查找器、Safari網絡瀏覽器、iCal、地址簿或者其他的一些程序。它還能和一些第三方的程序一起工作,如微軟的Office、Adobe公司的Photoshop或者Pixelmator等。

Proving compositionality of behavioral equivalence on state-based systems with respect to algebraic operations is a classical and widely studied problem. We study a categorical formulation of this problem, where operations on state-based systems modeled as coalgebras can be elegantly captured through distributive laws between functors. To prove compositionality, it then suffices to show that this distributive law lifts from sets to relations, giving an explanation of how behavioral equivalence on smaller systems can be combined to obtain behavioral equivalence on the composed system. In this paper, we refine this approach by focusing on so-called codensity lifting of functors, which gives a very generic presentation of various notions of (bi)similarity as well as quantitative notions such as behavioral metrics on probabilistic systems. The key idea is to use codensity liftings both at the level of algebras and coalgebras, using a new generalization of the codensity lifting. The problem of lifting distributive laws then reduces to the abstract problem of constructing distributive laws between codensity liftings, for which we propose a simplified sufficient condition. Our sufficient condition instantiates to concrete proof methods for compositionality of algebraic operations on various types of state-based systems. We instantiate our results to prove compositionality of qualitative and quantitative properties of deterministic automata. We also explore the limits of our approach by including an example of probabilistic systems, where it is unclear whether the sufficient condition holds, and instead we use our setting to give a direct proof of compositionality. ...

Directly parameterizing and learning gradients of functions has widespread significance, with specific applications in optimization, generative modeling, and optimal transport. This paper introduces gradient networks (GradNets): novel neural network architectures that parameterize gradients of various function classes. GradNets exhibit specialized architectural constraints that ensure correspondence to gradient functions. We provide a comprehensive GradNet design framework that includes methods for transforming GradNets into monotone gradient networks (mGradNets), which are guaranteed to represent gradients of convex functions. We establish the approximation capabilities of the proposed GradNet and mGradNet. Our results demonstrate that these networks universally approximate the gradients of (convex) functions. Furthermore, these networks can be customized to correspond to specific spaces of (monotone) gradient functions, including gradients of transformed sums of (convex) ridge functions. Our analysis leads to two distinct GradNet architectures, GradNet-C and GradNet-M, and we describe the corresponding monotone versions, mGradNet-C and mGradNet-M. Our empirical results show that these architectures offer efficient parameterizations and outperform popular methods in gradient field learning tasks.

We define a new framework that unifies the filtration and mapper approaches from TDA, and present efficient algorithms to compute it. Termed the box filtration of a PCD, we grow boxes (hyperrectangles) that are not necessarily centered at each point (in place of balls centered at points). We grow the boxes non-uniformly and asymmetrically in different dimensions based on the distribution of points. We present two approaches to handle the boxes: a point cover where each point is assigned its own box at start, and a pixel cover that works with a pixelization of the space of the PCD. Any box cover in either setting automatically gives a mapper of the PCD. We show that the persistence diagrams generated by the box filtration using both point and pixel covers satisfy the classical stability based on the Gromov-Hausdorff distance. Using boxes also implies that the box filtration is identical for pairwise or higher order intersections whereas the VR and Cech filtration are not the same. Growth in each dimension is computed by solving a linear program (LP) that optimizes a cost functional balancing the cost of expansion and benefit of including more points in the box. The box filtration algorithm runs in $O(m|U(0)|\log(mn\pi)L(q))$ time, where $m$ is number of steps of increments considered for box growth, $|U(0)|$ is the number of boxes in the initial cover ($\leq$ number of points), $\pi$ is the step length for increasing each box dimension, each LP is solved in $O(L(q))$ time, $n$ is the PCD dimension, and $q = n \times |X|$. We demonstrate through multiple examples that the box filtration can produce more accurate results to summarize the topology of the PCD than VR and distance-to-measure (DTM) filtrations. Software for our implementation is available at //github.com/pragup/Box-Filteration.

The ability to learn good representations of states is essential for solving large reinforcement learning problems, where exploration, generalization, and transfer are particularly challenging. The Laplacian representation is a promising approach to address these problems by inducing informative state encoding and intrinsic rewards for temporally-extended action discovery and reward shaping. To obtain the Laplacian representation one needs to compute the eigensystem of the graph Laplacian, which is often approximated through optimization objectives compatible with deep learning approaches. These approximations, however, depend on hyperparameters that are impossible to tune efficiently, converge to arbitrary rotations of the desired eigenvectors, and are unable to accurately recover the corresponding eigenvalues. In this paper we introduce a theoretically sound objective and corresponding optimization algorithm for approximating the Laplacian representation. Our approach naturally recovers both the true eigenvectors and eigenvalues while eliminating the hyperparameter dependence of previous approximations. We provide theoretical guarantees for our method and we show that those results translate empirically into robust learning across multiple environments.

The rapid development of deep learning techniques, improved computational power, and the availability of vast training data have led to significant advancements in pre-trained models and large language models (LLMs). Pre-trained models based on architectures such as BERT and Transformer, as well as LLMs like ChatGPT, have demonstrated remarkable language capabilities and found applications in Software engineering. Software engineering tasks can be divided into many categories, among which generative tasks are the most concern by researchers, where pre-trained models and LLMs possess powerful language representation and contextual awareness capabilities, enabling them to leverage diverse training data and adapt to generative tasks through fine-tuning, transfer learning, and prompt engineering. These advantages make them effective tools in generative tasks and have demonstrated excellent performance. In this paper, we present a comprehensive literature review of generative tasks in SE using pre-trained models and LLMs. We accurately categorize SE generative tasks based on software engineering methodologies and summarize the advanced pre-trained models and LLMs involved, as well as the datasets and evaluation metrics used. Additionally, we identify key strengths, weaknesses, and gaps in existing approaches, and propose potential research directions. This review aims to provide researchers and practitioners with an in-depth analysis and guidance on the application of pre-trained models and LLMs in generative tasks within SE.

Disentangled Representation Learning (DRL) aims to learn a model capable of identifying and disentangling the underlying factors hidden in the observable data in representation form. The process of separating underlying factors of variation into variables with semantic meaning benefits in learning explainable representations of data, which imitates the meaningful understanding process of humans when observing an object or relation. As a general learning strategy, DRL has demonstrated its power in improving the model explainability, controlability, robustness, as well as generalization capacity in a wide range of scenarios such as computer vision, natural language processing, data mining etc. In this article, we comprehensively review DRL from various aspects including motivations, definitions, methodologies, evaluations, applications and model designs. We discuss works on DRL based on two well-recognized definitions, i.e., Intuitive Definition and Group Theory Definition. We further categorize the methodologies for DRL into four groups, i.e., Traditional Statistical Approaches, Variational Auto-encoder Based Approaches, Generative Adversarial Networks Based Approaches, Hierarchical Approaches and Other Approaches. We also analyze principles to design different DRL models that may benefit different tasks in practical applications. Finally, we point out challenges in DRL as well as potential research directions deserving future investigations. We believe this work may provide insights for promoting the DRL research in the community.

Graph Neural Networks (GNNs) have been successfully used in many problems involving graph-structured data, achieving state-of-the-art performance. GNNs typically employ a message-passing scheme, in which every node aggregates information from its neighbors using a permutation-invariant aggregation function. Standard well-examined choices such as the mean or sum aggregation functions have limited capabilities, as they are not able to capture interactions among neighbors. In this work, we formalize these interactions using an information-theoretic framework that notably includes synergistic information. Driven by this definition, we introduce the Graph Ordering Attention (GOAT) layer, a novel GNN component that captures interactions between nodes in a neighborhood. This is achieved by learning local node orderings via an attention mechanism and processing the ordered representations using a recurrent neural network aggregator. This design allows us to make use of a permutation-sensitive aggregator while maintaining the permutation-equivariance of the proposed GOAT layer. The GOAT model demonstrates its increased performance in modeling graph metrics that capture complex information, such as the betweenness centrality and the effective size of a node. In practical use-cases, its superior modeling capability is confirmed through its success in several real-world node classification benchmarks.

The information bottleneck (IB) method is a technique for extracting information that is relevant for predicting the target random variable from the source random variable, which is typically implemented by optimizing the IB Lagrangian that balances the compression and prediction terms. However, the IB Lagrangian is hard to optimize, and multiple trials for tuning values of Lagrangian multiplier are required. Moreover, we show that the prediction performance strictly decreases as the compression gets stronger during optimizing the IB Lagrangian. In this paper, we implement the IB method from the perspective of supervised disentangling. Specifically, we introduce Disentangled Information Bottleneck (DisenIB) that is consistent on compressing source maximally without target prediction performance loss (maximum compression). Theoretical and experimental results demonstrate that our method is consistent on maximum compression, and performs well in terms of generalization, robustness to adversarial attack, out-of-distribution detection, and supervised disentangling.

Embedding models for deterministic Knowledge Graphs (KG) have been extensively studied, with the purpose of capturing latent semantic relations between entities and incorporating the structured knowledge into machine learning. However, there are many KGs that model uncertain knowledge, which typically model the inherent uncertainty of relations facts with a confidence score, and embedding such uncertain knowledge represents an unresolved challenge. The capturing of uncertain knowledge will benefit many knowledge-driven applications such as question answering and semantic search by providing more natural characterization of the knowledge. In this paper, we propose a novel uncertain KG embedding model UKGE, which aims to preserve both structural and uncertainty information of relation facts in the embedding space. Unlike previous models that characterize relation facts with binary classification techniques, UKGE learns embeddings according to the confidence scores of uncertain relation facts. To further enhance the precision of UKGE, we also introduce probabilistic soft logic to infer confidence scores for unseen relation facts during training. We propose and evaluate two variants of UKGE based on different learning objectives. Experiments are conducted on three real-world uncertain KGs via three tasks, i.e. confidence prediction, relation fact ranking, and relation fact classification. UKGE shows effectiveness in capturing uncertain knowledge by achieving promising results on these tasks, and consistently outperforms baselines on these tasks.

Graphs, which describe pairwise relations between objects, are essential representations of many real-world data such as social networks. In recent years, graph neural networks, which extend the neural network models to graph data, have attracted increasing attention. Graph neural networks have been applied to advance many different graph related tasks such as reasoning dynamics of the physical system, graph classification, and node classification. Most of the existing graph neural network models have been designed for static graphs, while many real-world graphs are inherently dynamic. For example, social networks are naturally evolving as new users joining and new relations being created. Current graph neural network models cannot utilize the dynamic information in dynamic graphs. However, the dynamic information has been proven to enhance the performance of many graph analytical tasks such as community detection and link prediction. Hence, it is necessary to design dedicated graph neural networks for dynamic graphs. In this paper, we propose DGNN, a new {\bf D}ynamic {\bf G}raph {\bf N}eural {\bf N}etwork model, which can model the dynamic information as the graph evolving. In particular, the proposed framework can keep updating node information by capturing the sequential information of edges, the time intervals between edges and information propagation coherently. Experimental results on various dynamic graphs demonstrate the effectiveness of the proposed framework.

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