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Formal methods were frequently shown to be effective and, perhaps because of that, practitioners are interested in using them more often. Still, these methods are far less applied than expected, particularly, in critical domains where they are strongly recommended and where they have the greatest potential. Our hypothesis is that formal methods still seem not to be applicable enough or ready for their intended use. In critical software engineering, what do we mean when we speak of a formal method? And what does it mean for such a method to be applicable both from a scientific and practical viewpoint? Based on what the literature tells about the first question, with this manifesto, we lay out a set of principles that when followed by a formal method give rise to its mature applicability in a given scope. Rather than exercising criticism of past developments, this manifesto strives to foster an increased use of formal methods to the maximum benefit.

Graph-modification problems, where we modify a graph by adding or deleting vertices or edges or contracting edges to obtain a graph in a {\it simpler} class, is a well-studied optimization problem in all algorithmic paradigms including classical, approximation and parameterized complexity. Specifically, graph-deletion problems, where one needs to delete a small number of vertices to make the resulting graph to belong to a given non-trivial hereditary graph class, captures several well-studied problems including {\sc Vertex Cover}, {\sc Feedback Vertex Set}, {\sc Odd Cycle Transveral}, {\sc Cluster Vertex Deletion}, and {\sc Perfect Deletion}. Investigation into these problems in parameterized complexity has given rise to powerful tools and techniques. We initiate a study of a natural variation of the problem of deletion to {\it scattered graph classes}. We want to delete at most $k$ vertices so that in the resulting graph, each connected component belongs to one of a constant number of graph classes. As our main result, we show that this problem is fixed-parameter tractable (FPT) when the deletion problem corresponding to each of the finite number of graph classes is known to be FPT and the properties that a graph belongs to any of the classes is expressible in Counting Monodic Second Order (CMSO) logic. While this is shown using some black box theorems in parameterized complexity, we give a faster FPT algorithm when each of the graph classes has a finite forbidden set.

Relying on random matrix theory (RMT), this paper studies asymmetric order-$d$ spiked tensor models with Gaussian noise. Using the variational definition of the singular vectors and values of [Lim, 2005], we show that the analysis of the considered model boils down to the analysis of an equivalent spiked symmetric \textit{block-wise} random matrix, that is constructed from \textit{contractions} of the studied tensor with the singular vectors associated to its best rank-1 approximation. Our approach allows the exact characterization of the almost sure asymptotic singular value and alignments of the corresponding singular vectors with the true spike components, when $\frac{n_i}{\sum_{j=1}^d n_j}\to c_i\in [0, 1]$ with $n_i$'s the tensor dimensions. In contrast to other works that rely mostly on tools from statistical physics to study random tensors, our results rely solely on classical RMT tools such as Stein's lemma. Finally, classical RMT results concerning spiked random matrices are recovered as a particular case.

We generalize the "indirect learning" technique of Furst et. al., 1991 to reduce from learning a concept class over a samplable distribution $\mu$ to learning the same concept class over the uniform distribution. The reduction succeeds when the sampler for $\mu$ is both contained in the target concept class and efficiently invertible in the sense of Impagliazzo & Luby, 1989. We give two applications. - We show that AC0[q] is learnable over any succinctly-described product distribution. AC0[q] is the class of constant-depth Boolean circuits of polynomial size with AND, OR, NOT, and counting modulo $q$ gates of unbounded fanins. Our algorithm runs in randomized quasi-polynomial time and uses membership queries. - If there is a strongly useful natural property in the sense of Razborov & Rudich 1997 -- an efficient algorithm that can distinguish between random strings and strings of non-trivial circuit complexity -- then general polynomial-sized Boolean circuits are learnable over any efficiently samplable distribution in randomized polynomial time, given membership queries to the target function

We employ a toolset -- dubbed Dr. Frankenstein -- to analyse the similarity of representations in deep neural networks. With this toolset, we aim to match the activations on given layers of two trained neural networks by joining them with a stitching layer. We demonstrate that the inner representations emerging in deep convolutional neural networks with the same architecture but different initializations can be matched with a surprisingly high degree of accuracy even with a single, affine stitching layer. We choose the stitching layer from several possible classes of linear transformations and investigate their performance and properties. The task of matching representations is closely related to notions of similarity. Using this toolset, we also provide a novel viewpoint on the current line of research regarding similarity indices of neural network representations: the perspective of the performance on a task.

Multi-hop logical reasoning is an established problem in the field of representation learning on knowledge graphs (KGs). It subsumes both one-hop link prediction as well as other more complex types of logical queries. Existing algorithms operate only on classical, triple-based graphs, whereas modern KGs often employ a hyper-relational modeling paradigm. In this paradigm, typed edges may have several key-value pairs known as qualifiers that provide fine-grained context for facts. In queries, this context modifies the meaning of relations, and usually reduces the answer set. Hyper-relational queries are often observed in real-world KG applications, and existing approaches for approximate query answering cannot make use of qualifier pairs. In this work, we bridge this gap and extend the multi-hop reasoning problem to hyper-relational KGs allowing to tackle this new type of complex queries. Building upon recent advancements in Graph Neural Networks and query embedding techniques, we study how to embed and answer hyper-relational conjunctive queries. Besides that, we propose a method to answer such queries and demonstrate in our experiments that qualifiers improve query answering on a diverse set of query patterns.

Learning structural representations of node sets from graph-structured data is crucial for applications ranging from node-role discovery to link prediction and molecule classification. Graph Neural Networks (GNNs) have achieved great success in structural representation learning. However, most GNNs are limited by the 1-Weisfeiler-Lehman (WL) test and thus possible to generate identical representation for structures and graphs that are actually different. More powerful GNNs, proposed recently by mimicking higher-order-WL tests, only focus on entire-graph representations and cannot utilize sparsity of the graph structure to be computationally efficient. Here we propose a general class of structure-related features, termed Distance Encoding (DE), to assist GNNs in representing node sets with arbitrary sizes with strictly more expressive power than the 1-WL test. DE essentially captures the distance between the node set whose representation is to be learnt and each node in the graph, which includes important graph-related measures such as shortest-path-distance and generalized PageRank scores. We propose two general frameworks for GNNs to use DEs (1) as extra node attributes and (2) further as controllers of message aggregation in GNNs. Both frameworks may still utilize the sparse structure to keep scalability to process large graphs. In theory, we prove that these two frameworks can distinguish node sets embedded in almost all regular graphs where traditional GNNs always fail. We also rigorously analyze their limitations. Empirically, we evaluate these two frameworks on node structural roles prediction, link prediction and triangle prediction over six real networks. The results show that our models outperform GNNs without DEs by up-to 15% improvement in average accuracy and AUC. Our models also significantly outperform other SOTA baselines particularly designed for those tasks.

Tensor factorization has become an increasingly popular approach to knowledge graph completion(KGC), which is the task of automatically predicting missing facts in a knowledge graph. However, even with a simple model like CANDECOMP/PARAFAC(CP) tensor decomposition, KGC on existing knowledge graphs is impractical in resource-limited environments, as a large amount of memory is required to store parameters represented as 32-bit or 64-bit floating point numbers. This limitation is expected to become more stringent as existing knowledge graphs, which are already huge, keep steadily growing in scale. To reduce the memory requirement, we present a method for binarizing the parameters of the CP tensor decomposition by introducing a quantization function to the optimization problem. This method replaces floating point-valued parameters with binary ones after training, which drastically reduces the model size at run time. We investigate the trade-off between the quality and size of tensor factorization models for several KGC benchmark datasets. In our experiments, the proposed method successfully reduced the model size by more than an order of magnitude while maintaining the task performance. Moreover, a fast score computation technique can be developed with bitwise operations.

We show that for the problem of testing if a matrix $A \in F^{n \times n}$ has rank at most $d$, or requires changing an $\epsilon$-fraction of entries to have rank at most $d$, there is a non-adaptive query algorithm making $\widetilde{O}(d^2/\epsilon)$ queries. Our algorithm works for any field $F$. This improves upon the previous $O(d^2/\epsilon^2)$ bound (SODA'03), and bypasses an $\Omega(d^2/\epsilon^2)$ lower bound of (KDD'14) which holds if the algorithm is required to read a submatrix. Our algorithm is the first such algorithm which does not read a submatrix, and instead reads a carefully selected non-adaptive pattern of entries in rows and columns of $A$. We complement our algorithm with a matching query complexity lower bound for non-adaptive testers over any field. We also give tight bounds of $\widetilde{\Theta}(d^2)$ queries in the sensing model for which query access comes in the form of $\langle X_i, A\rangle:=tr(X_i^\top A)$; perhaps surprisingly these bounds do not depend on $\epsilon$. We next develop a novel property testing framework for testing numerical properties of a real-valued matrix $A$ more generally, which includes the stable rank, Schatten-$p$ norms, and SVD entropy. Specifically, we propose a bounded entry model, where $A$ is required to have entries bounded by $1$ in absolute value. We give upper and lower bounds for a wide range of problems in this model, and discuss connections to the sensing model above.

We consider the task of learning the parameters of a {\em single} component of a mixture model, for the case when we are given {\em side information} about that component, we call this the "search problem" in mixture models. We would like to solve this with computational and sample complexity lower than solving the overall original problem, where one learns parameters of all components. Our main contributions are the development of a simple but general model for the notion of side information, and a corresponding simple matrix-based algorithm for solving the search problem in this general setting. We then specialize this model and algorithm to four common scenarios: Gaussian mixture models, LDA topic models, subspace clustering, and mixed linear regression. For each one of these we show that if (and only if) the side information is informative, we obtain parameter estimates with greater accuracy, and also improved computation complexity than existing moment based mixture model algorithms (e.g. tensor methods). We also illustrate several natural ways one can obtain such side information, for specific problem instances. Our experiments on real data sets (NY Times, Yelp, BSDS500) further demonstrate the practicality of our algorithms showing significant improvement in runtime and accuracy.