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Objective: Computer-aided disease diagnosis and prognosis based on medical images is a rapidly emerging field. Many Convolutional Neural Network (CNN) architectures have been developed by researchers for disease classification and localization from chest X-ray images. It is known that different thoracic disease lesions are more likely to occur in specific anatomical regions compared to others. This article aims to incorporate this disease and region-dependent prior probability distribution within a deep learning framework. Methods: We present the ThoraX-PriorNet, a novel attention-based CNN model for thoracic disease classification. We first estimate a disease-dependent spatial probability, i.e., an anatomical prior, that indicates the probability of occurrence of a disease in a specific region in a chest X-ray image. Next, we develop a novel attention-based classification model that combines information from the estimated anatomical prior and automatically extracted chest region of interest (ROI) masks to provide attention to the feature maps generated from a deep convolution network. Unlike previous works that utilize various self-attention mechanisms, the proposed method leverages the extracted chest ROI masks along with the probabilistic anatomical prior information, which selects the region of interest for different diseases to provide attention. Results: The proposed method shows superior performance in disease classification on the NIH ChestX-ray14 dataset compared to existing state-of-the-art methods while reaching an area under the ROC curve (%AUC) of 84.67. Regarding disease localization, the anatomy prior attention method shows competitive performance compared to state-of-the-art methods, achieving an accuracy of 0.80, 0.63, 0.49, 0.33, 0.28, 0.21, and 0.04 with an Intersection over Union (IoU) threshold of 0.1, 0.2, 0.3, 0.4, 0.5, 0.6, and 0.7, respectively.

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先驗概(gai)率(lv)(lv)(lv)(prior probability)是指(zhi)根(gen)據以往經驗和分(fen)析得到的(de)(de)概(gai)率(lv)(lv)(lv),如全概(gai)率(lv)(lv)(lv)公(gong)式,它往往作為"由因(yin)(yin)求果"問(wen)題中(zhong)的(de)(de)"因(yin)(yin)"出現的(de)(de)概(gai)率(lv)(lv)(lv)。

In the dynamic landscape of medical artificial intelligence, this study explores the vulnerabilities of the Pathology Language-Image Pretraining (PLIP) model, a Vision Language Foundation model, under targeted adversarial conditions. Leveraging the Kather Colon dataset with 7,180 H&E images across nine tissue types, our investigation employs Projected Gradient Descent (PGD) adversarial attacks to intentionally induce misclassifications. The outcomes reveal a 100% success rate in manipulating PLIP's predictions, underscoring its susceptibility to adversarial perturbations. The qualitative analysis of adversarial examples delves into the interpretability challenges, shedding light on nuanced changes in predictions induced by adversarial manipulations. These findings contribute crucial insights into the interpretability, domain adaptation, and trustworthiness of Vision Language Models in medical imaging. The study emphasizes the pressing need for robust defenses to ensure the reliability of AI models.

Language models such as Bidirectional Encoder Representations from Transformers (BERT) have been very effective in various Natural Language Processing (NLP) and text mining tasks including text classification. However, some tasks still pose challenges for these models, including text classification with limited labels. This can result in a cold-start problem. Although some approaches have attempted to address this problem through single-stage clustering as an intermediate training step coupled with a pre-trained language model, which generates pseudo-labels to improve classification, these methods are often error-prone due to the limitations of the clustering algorithms. To overcome this, we have developed a novel two-stage intermediate clustering with subsequent fine-tuning that models the pseudo-labels reliably, resulting in reduced prediction errors. The key novelty in our model, IDoFew, is that the two-stage clustering coupled with two different clustering algorithms helps exploit the advantages of the complementary algorithms that reduce the errors in generating reliable pseudo-labels for fine-tuning. Our approach has shown significant improvements compared to strong comparative models.

The evolution of Large Language Models (LLMs) has introduced a new paradigm for investigating human behavior emulation. Recent research has employed LLM-based Agents to create a sociological research environment, in which agents exhibit behavior based on the unfiltered characteristics of large language models. However, these studies overlook the iterative development within a human-like setting - Human preferences and personalities are complex, shaped by various factors and subject to ongoing change as a result of environmental and subjective influences. In light of this observation, we propose Agent Framework for Shaping Preference and Personality (AFSPP), exploring the multifaceted impact of social networks and subjective consciousness on LLM-based Agents' preference and personality formation. With AFSPP, we have, for the first time, successfully replicated several key findings from human personality experiments. And other AFSPP-based experimental results indicate that plan making, sensory perceptions and social networking with subjective information, wield the most pronounced influence on preference shaping. AFSPP can significantly enhance the efficiency and scope of psychological experiments, while yielding valuable insights for Trustworthy Artificial Intelligence research for strategies to prevent undesirable preference and personality development.

In the dynamic landscape of medical artificial intelligence, this study explores the vulnerabilities of the Pathology Language-Image Pretraining (PLIP) model, a Vision Language Foundation model, under targeted adversarial conditions. Leveraging the Kather Colon dataset with 7,180 H&E images across nine tissue types, our investigation employs Projected Gradient Descent (PGD) adversarial attacks to intentionally induce misclassifications. The outcomes reveal a 100% success rate in manipulating PLIP's predictions, underscoring its susceptibility to adversarial perturbations. The qualitative analysis of adversarial examples delves into the interpretability challenges, shedding light on nuanced changes in predictions induced by adversarial manipulations. These findings contribute crucial insights into the interpretability, domain adaptation, and trustworthiness of Vision Language Models in medical imaging. The study emphasizes the pressing need for robust defenses to ensure the reliability of AI models.

The burgeoning field of Large Language Models (LLMs), exemplified by sophisticated models like OpenAI's ChatGPT, represents a significant advancement in artificial intelligence. These models, however, bring forth substantial challenges in the high consumption of computational, memory, energy, and financial resources, especially in environments with limited resource capabilities. This survey aims to systematically address these challenges by reviewing a broad spectrum of techniques designed to enhance the resource efficiency of LLMs. We categorize methods based on their optimization focus: computational, memory, energy, financial, and network resources and their applicability across various stages of an LLM's lifecycle, including architecture design, pretraining, finetuning, and system design. Additionally, the survey introduces a nuanced categorization of resource efficiency techniques by their specific resource types, which uncovers the intricate relationships and mappings between various resources and corresponding optimization techniques. A standardized set of evaluation metrics and datasets is also presented to facilitate consistent and fair comparisons across different models and techniques. By offering a comprehensive overview of the current sota and identifying open research avenues, this survey serves as a foundational reference for researchers and practitioners, aiding them in developing more sustainable and efficient LLMs in a rapidly evolving landscape.

Therapeutic peptides represent a unique class of pharmaceutical agents crucial for the treatment of human diseases. Recently, deep generative models have exhibited remarkable potential for generating therapeutic peptides, but they only utilize sequence or structure information alone, which hinders the performance in generation. In this study, we propose a Multi-Modal Contrastive Diffusion model (MMCD), fusing both sequence and structure modalities in a diffusion framework to co-generate novel peptide sequences and structures. Specifically, MMCD constructs the sequence-modal and structure-modal diffusion models, respectively, and devises a multi-modal contrastive learning strategy with intercontrastive and intra-contrastive in each diffusion timestep, aiming to capture the consistency between two modalities and boost model performance. The inter-contrastive aligns sequences and structures of peptides by maximizing the agreement of their embeddings, while the intra-contrastive differentiates therapeutic and non-therapeutic peptides by maximizing the disagreement of their sequence/structure embeddings simultaneously. The extensive experiments demonstrate that MMCD performs better than other state-of-theart deep generative methods in generating therapeutic peptides across various metrics, including antimicrobial/anticancer score, diversity, and peptide-docking.

Medical Visual Question Answering (VQA) is a combination of medical artificial intelligence and popular VQA challenges. Given a medical image and a clinically relevant question in natural language, the medical VQA system is expected to predict a plausible and convincing answer. Although the general-domain VQA has been extensively studied, the medical VQA still needs specific investigation and exploration due to its task features. In the first part of this survey, we cover and discuss the publicly available medical VQA datasets up to date about the data source, data quantity, and task feature. In the second part, we review the approaches used in medical VQA tasks. In the last part, we analyze some medical-specific challenges for the field and discuss future research directions.

Normalization is known to help the optimization of deep neural networks. Curiously, different architectures require specialized normalization methods. In this paper, we study what normalization is effective for Graph Neural Networks (GNNs). First, we adapt and evaluate the existing methods from other domains to GNNs. Faster convergence is achieved with InstanceNorm compared to BatchNorm and LayerNorm. We provide an explanation by showing that InstanceNorm serves as a preconditioner for GNNs, but such preconditioning effect is weaker with BatchNorm due to the heavy batch noise in graph datasets. Second, we show that the shift operation in InstanceNorm results in an expressiveness degradation of GNNs for highly regular graphs. We address this issue by proposing GraphNorm with a learnable shift. Empirically, GNNs with GraphNorm converge faster compared to GNNs using other normalization. GraphNorm also improves the generalization of GNNs, achieving better performance on graph classification benchmarks.

Applying artificial intelligence techniques in medical imaging is one of the most promising areas in medicine. However, most of the recent success in this area highly relies on large amounts of carefully annotated data, whereas annotating medical images is a costly process. In this paper, we propose a novel method, called FocalMix, which, to the best of our knowledge, is the first to leverage recent advances in semi-supervised learning (SSL) for 3D medical image detection. We conducted extensive experiments on two widely used datasets for lung nodule detection, LUNA16 and NLST. Results show that our proposed SSL methods can achieve a substantial improvement of up to 17.3% over state-of-the-art supervised learning approaches with 400 unlabeled CT scans.

Named entity recognition (NER) in Chinese is essential but difficult because of the lack of natural delimiters. Therefore, Chinese Word Segmentation (CWS) is usually considered as the first step for Chinese NER. However, models based on word-level embeddings and lexicon features often suffer from segmentation errors and out-of-vocabulary (OOV) words. In this paper, we investigate a Convolutional Attention Network called CAN for Chinese NER, which consists of a character-based convolutional neural network (CNN) with local-attention layer and a gated recurrent unit (GRU) with global self-attention layer to capture the information from adjacent characters and sentence contexts. Also, compared to other models, not depending on any external resources like lexicons and employing small size of char embeddings make our model more practical. Extensive experimental results show that our approach outperforms state-of-the-art methods without word embedding and external lexicon resources on different domain datasets including Weibo, MSRA and Chinese Resume NER dataset.

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