This paper introduces a novel multimodal and high-resolution human brain cerebellum lobule segmentation method. Unlike current tools that operate at standard resolution ($1 \text{ mm}^{3}$) or using mono-modal data, the proposed method improves cerebellum lobule segmentation through the use of a multimodal and ultra-high resolution ($0.125 \text{ mm}^{3}$) training dataset. To develop the method, first, a database of semi-automatically labelled cerebellum lobules was created to train the proposed method with ultra-high resolution T1 and T2 MR images. Then, an ensemble of deep networks has been designed and developed, allowing the proposed method to excel in the complex cerebellum lobule segmentation task, improving precision while being memory efficient. Notably, our approach deviates from the traditional U-Net model by exploring alternative architectures. We have also integrated deep learning with classical machine learning methods incorporating a priori knowledge from multi-atlas segmentation, which improved precision and robustness. Finally, a new online pipeline, named DeepCERES, has been developed to make available the proposed method to the scientific community requiring as input only a single T1 MR image at standard resolution.
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This paper introduces a novel methodology for Feature Selection for Functional Classification, FSFC, that addresses the challenge of jointly performing feature selection and classification of functional data in scenarios with categorical responses and multivariate longitudinal features. FSFC tackles a newly defined optimization problem that integrates logistic loss and functional features to identify the most crucial variables for classification. To address the minimization procedure, we employ functional principal components and develop a new adaptive version of the Dual Augmented Lagrangian algorithm. The computational efficiency of FSFC enables handling high-dimensional scenarios where the number of features may considerably exceed the number of statistical units. Simulation experiments demonstrate that FSFC outperforms other machine learning and deep learning methods in computational time and classification accuracy. Furthermore, the FSFC feature selection capability can be leveraged to significantly reduce the problem's dimensionality and enhance the performances of other classification algorithms. The efficacy of FSFC is also demonstrated through a real data application, analyzing relationships between four chronic diseases and other health and demographic factors.
We present novel improvements in the context of symbol-based multigrid procedures for solving large block structured linear systems. We study the application of an aggregation-based grid transfer operator that transforms the symbol of a block Toeplitz matrix from matrix-valued to scalar-valued at the coarser level. Our convergence analysis of the Two-Grid Method (TGM) reveals the connection between the features of the scalar-valued symbol at the coarser level and the properties of the original matrix-valued one. This allows us to prove the convergence of a V-cycle multigrid with standard grid transfer operators for scalar Toeplitz systems at the coarser levels. Consequently, we extend the class of suitable smoothers for block Toeplitz matrices, focusing on the efficiency of block strategies, particularly the relaxed block Jacobi method. General conditions on smoothing parameters are derived, with emphasis on practical applications where these parameters can be calculated with negligible computational cost. We test the proposed strategies on linear systems stemming from the discretization of differential problems with $\mathbb{Q}_{d} $ Lagrangian FEM or B-spline with non-maximal regularity. The numerical results show in both cases computational advantages compared to existing methods for block structured linear systems.
The fundamental computational issues in Bayesian inverse problems (BIP) governed by partial differential equations (PDEs) stem from the requirement of repeated forward model evaluations. A popular strategy to reduce such costs is to replace expensive model simulations with computationally efficient approximations using operator learning, motivated by recent progress in deep learning. However, using the approximated model directly may introduce a modeling error, exacerbating the already ill-posedness of inverse problems. Thus, balancing between accuracy and efficiency is essential for the effective implementation of such approaches. To this end, we develop an adaptive operator learning framework that can reduce modeling error gradually by forcing the surrogate to be accurate in local areas. This is accomplished by adaptively fine-tuning the pre-trained approximate model with train- ing points chosen by a greedy algorithm during the posterior computational process. To validate our approach, we use DeepOnet to construct the surrogate and unscented Kalman inversion (UKI) to approximate the BIP solution, respectively. Furthermore, we present a rigorous convergence guarantee in the linear case using the UKI framework. The approach is tested on a number of benchmarks, including the Darcy flow, the heat source inversion problem, and the reaction-diffusion problem. The numerical results show that our method can significantly reduce computational costs while maintaining inversion accuracy.
This paper introduces a new storage-optimal first-order method (FOM), CertSDP, for solving a special class of semidefinite programs (SDPs) to high accuracy. The class of SDPs that we consider, the exact QMP-like SDPs, is characterized by low-rank solutions, a priori knowledge of the restriction of the SDP solution to a small subspace, and standard regularity assumptions such as strict complementarity. Crucially, we show how to use a certificate of strict complementarity to construct a low-dimensional strongly convex minimax problem whose optimizer coincides with a factorization of the SDP optimizer. From an algorithmic standpoint, we show how to construct the necessary certificate and how to solve the minimax problem efficiently. We accompany our theoretical results with preliminary numerical experiments suggesting that CertSDP significantly outperforms current state-of-the-art methods on large sparse exact QMP-like SDPs.
This paper investigates goal-oriented communication for remote estimation of multiple Markov sources in resource-constrained networks. An agent decides the updating times of the sources and transmits the packet to a remote destination over an unreliable channel with delay. The destination is tasked with source reconstruction for actuation. We utilize the metric \textit{cost of actuation error} (CAE) to capture the state-dependent actuation costs. We aim for a sampling policy that minimizes the long-term average CAE subject to an average resource constraint. We formulate this problem as an average-cost constrained Markov Decision Process (CMDP) and relax it into an unconstrained problem by utilizing \textit{Lyapunov drift} techniques. Then, we propose a low-complexity \textit{drift-plus-penalty} (DPP) policy for systems with known source/channel statistics and a Lyapunov optimization-based deep reinforcement learning (LO-DRL) policy for unknown environments. Our policies significantly reduce the number of uninformative transmissions by exploiting the timing of the important information.
Despite recent availability of large transcribed Kinyarwanda speech data, achieving robust speech recognition for Kinyarwanda is still challenging. In this work, we show that using self-supervised pre-training, following a simple curriculum schedule during fine-tuning and using semi-supervised learning to leverage large unlabelled speech data significantly improve speech recognition performance for Kinyarwanda. Our approach focuses on using public domain data only. A new studio-quality speech dataset is collected from a public website, then used to train a clean baseline model. The clean baseline model is then used to rank examples from a more diverse and noisy public dataset, defining a simple curriculum training schedule. Finally, we apply semi-supervised learning to label and learn from large unlabelled data in five successive generations. Our final model achieves 3.2% word error rate (WER) on the new dataset and 15.6% WER on Mozilla Common Voice benchmark, which is state-of-the-art to the best of our knowledge. Our experiments also indicate that using syllabic rather than character-based tokenization results in better speech recognition performance for Kinyarwanda.
We present an asymptotic expansion formula of an estimator for the drift coefficient of the fractional Ornstein-Uhlenbeck process. As the machinery, we apply the general expansion scheme for Wiener functionals recently developed by the authors [26]. The central limit theorem in the principal part of the expansion has the classical scaling T^{1/2}. However, the asymptotic expansion formula is a complex in that the order of the correction term becomes the classical T^{-1/2} for H in (1/2,5/8), but T^{4H-3} for H in [5/8, 3/4).
Variable selection has played a critical role in modern statistical learning and scientific discoveries. Numerous regularization and Bayesian variable selection methods have been developed in the past two decades for variable selection, but most of these methods consider selecting variables for only one response. As more data is being collected nowadays, it is common to analyze multiple related responses from the same study. Existing multivariate variable selection methods select variables for all responses without considering the possible heterogeneity across different responses, i.e. some features may only predict a subset of responses but not the rest. Motivated by the multi-trait fine mapping problem in genetics to identify the causal variants for multiple related traits, we developed a novel multivariate Bayesian variable selection method to select critical predictors from a large number of grouped predictors that target at multiple correlated and possibly heterogeneous responses. Our new method is featured by its selection at multiple levels, its incorporation of prior biological knowledge to guide selection and identification of best subset of responses predictors target at. We showed the advantage of our method via extensive simulations and a real fine mapping example to identify causal variants associated with different subsets of addictive behaviors.
Deep neural network based recommendation systems have achieved great success as information filtering techniques in recent years. However, since model training from scratch requires sufficient data, deep learning-based recommendation methods still face the bottlenecks of insufficient data and computational inefficiency. Meta-learning, as an emerging paradigm that learns to improve the learning efficiency and generalization ability of algorithms, has shown its strength in tackling the data sparsity issue. Recently, a growing number of studies on deep meta-learning based recommenddation systems have emerged for improving the performance under recommendation scenarios where available data is limited, e.g. user cold-start and item cold-start. Therefore, this survey provides a timely and comprehensive overview of current deep meta-learning based recommendation methods. Specifically, we propose a taxonomy to discuss existing methods according to recommendation scenarios, meta-learning techniques, and meta-knowledge representations, which could provide the design space for meta-learning based recommendation methods. For each recommendation scenario, we further discuss technical details about how existing methods apply meta-learning to improve the generalization ability of recommendation models. Finally, we also point out several limitations in current research and highlight some promising directions for future research in this area.
We propose a novel two-layered attention network based on Bidirectional Long Short-Term Memory for sentiment analysis. The novel two-layered attention network takes advantage of the external knowledge bases to improve the sentiment prediction. It uses the Knowledge Graph Embedding generated using the WordNet. We build our model by combining the two-layered attention network with the supervised model based on Support Vector Regression using a Multilayer Perceptron network for sentiment analysis. We evaluate our model on the benchmark dataset of SemEval 2017 Task 5. Experimental results show that the proposed model surpasses the top system of SemEval 2017 Task 5. The model performs significantly better by improving the state-of-the-art system at SemEval 2017 Task 5 by 1.7 and 3.7 points for sub-tracks 1 and 2 respectively.
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