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We present a polynomial-time algorithm that discovers all maximal patterns in a point set, $D\in\mathbb{R}^k$, that are related by transformations in a user-specified class, $F$, of bijections over $\mathbb{R}^k$. We also present a second algorithm that discovers the set of occurrences for each of these maximal patterns and then uses compact encodings of these occurrence sets to compute a losslessly compressed encoding of the input point set. This encoding takes the form of a set of pairs, $E=\left\lbrace\left\langle P_1, T_1\right\rangle,\left\langle P_2, T_2\right\rangle,\ldots\left\langle P_{\ell}, T_{\ell}\right\rangle\right\rbrace$, where each $\langle P_i,T_i\rangle$ consists of a maximal pattern, $P_i\subseteq D$, and a set, $T_i\subset F$, of transformations that map $P_i$ onto other subsets of $D$. Each transformation is encoded by a vector of real values that uniquely identifies it within $F$ and the length of this vector is used as a measure of the complexity of $F$. We evaluate the new compression algorithm with three transformation classes of differing complexity, on the task of classifying folk-song melodies into tune families. The most complex of the classes tested includes all combinations of the musical transformations of transposition, inversion, retrograde, augmentation and diminution. We found that broadening the transformation class improved performance on this task. However, it did not, on average, improve compression factor, which may be due to the datasets (in this case, folk-song melodies) being too short and simple to benefit from the potentially greater number of pattern relationships that are discoverable with larger transformation classes.

Gaussian processes are among the most useful tools in modeling continuous processes in machine learning and statistics. If the value of a process is known at a finite collection of points, one may use Gaussian processes to construct a surface which interpolates these values to be used for prediction and uncertainty quantification in other locations. However, it is not always the case that the available information is in the form of a finite collection of points. For example, boundary value problems contain information on the boundary of a domain, which is an uncountable collection of points that cannot be incorporated into typical Gaussian process techniques. In this paper we construct a Gaussian process model which utilizes reproducing kernel Hilbert spaces to unify the typical finite case with the case of having uncountable information by exploiting the equivalence of conditional expectation and orthogonal projections. We discuss this construction in statistical models, including numerical considerations and a proof of concept.

Reference priors are theoretically attractive for the analysis of geostatistical data since they enable automatic Bayesian analysis and have desirable Bayesian and frequentist properties. But their use is hindered by computational hurdles that make their application in practice challenging. In this work, we derive a new class of default priors that approximate reference priors for the parameters of some Gaussian random fields. It is based on an approximation to the integrated likelihood of the covariance parameters derived from the spectral approximation of stationary random fields. This prior depends on the structure of the mean function and the spectral density of the model evaluated at a set of spectral points associated with an auxiliary regular grid. In addition to preserving the desirable Bayesian and frequentist properties, these approximate reference priors are more stable, and their computations are much less onerous than those of exact reference priors. Unlike exact reference priors, the marginal approximate reference prior of correlation parameter is always proper, regardless of the mean function or the smoothness of the correlation function. This property has important consequences for covariance model selection. An illustration comparing default Bayesian analyses is provided with a data set of lead pollution in Galicia, Spain.

We study the optimal sample complexity of learning a Gaussian directed acyclic graph (DAG) from observational data. Our main result establishes the minimax optimal sample complexity for learning the structure of a linear Gaussian DAG model with equal variances to be $n\asymp q\log(d/q)$, where $q$ is the maximum number of parents and $d$ is the number of nodes. We further make comparisons with the classical problem of learning (undirected) Gaussian graphical models, showing that under the equal variance assumption, these two problems share the same optimal sample complexity. In other words, at least for Gaussian models with equal error variances, learning a directed graphical model is not more difficult than learning an undirected graphical model. Our results also extend to more general identification assumptions as well as subgaussian errors.

We construct a family of genealogy-valued Markov processes that are induced by a continuous-time Markov population process. We derive exact expressions for the likelihood of a given genealogy conditional on the history of the underlying population process. These lead to a nonlinear filtering equation which can be used to design efficient Monte Carlo inference algorithms. We demonstrate these calculations with several examples. Existing full-information approaches for phylodynamic inference are special cases of the theory.

Neural networks have shown tremendous growth in recent years to solve numerous problems. Various types of neural networks have been introduced to deal with different types of problems. However, the main goal of any neural network is to transform the non-linearly separable input data into more linearly separable abstract features using a hierarchy of layers. These layers are combinations of linear and nonlinear functions. The most popular and common non-linearity layers are activation functions (AFs), such as Logistic Sigmoid, Tanh, ReLU, ELU, Swish and Mish. In this paper, a comprehensive overview and survey is presented for AFs in neural networks for deep learning. Different classes of AFs such as Logistic Sigmoid and Tanh based, ReLU based, ELU based, and Learning based are covered. Several characteristics of AFs such as output range, monotonicity, and smoothness are also pointed out. A performance comparison is also performed among 18 state-of-the-art AFs with different networks on different types of data. The insights of AFs are presented to benefit the researchers for doing further research and practitioners to select among different choices. The code used for experimental comparison is released at: \url{//github.com/shivram1987/ActivationFunctions}.

In recent years, the fields of natural language processing (NLP) and information retrieval (IR) have made tremendous progress thanks to deep learning models like Recurrent Neural Networks (RNNs), Gated Recurrent Units (GRUs) and Long Short-Term Memory (LSTMs) networks, and Transformer based models like Bidirectional Encoder Representations from Transformers (BERT). But these models are humongous in size. On the other hand, real world applications demand small model size, low response times and low computational power wattage. In this survey, we discuss six different types of methods (Pruning, Quantization, Knowledge Distillation, Parameter Sharing, Tensor Decomposition, and Linear Transformer based methods) for compression of such models to enable their deployment in real industry NLP projects. Given the critical need of building applications with efficient and small models, and the large amount of recently published work in this area, we believe that this survey organizes the plethora of work done by the 'deep learning for NLP' community in the past few years and presents it as a coherent story.

Since hardware resources are limited, the objective of training deep learning models is typically to maximize accuracy subject to the time and memory constraints of training and inference. We study the impact of model size in this setting, focusing on Transformer models for NLP tasks that are limited by compute: self-supervised pretraining and high-resource machine translation. We first show that even though smaller Transformer models execute faster per iteration, wider and deeper models converge in significantly fewer steps. Moreover, this acceleration in convergence typically outpaces the additional computational overhead of using larger models. Therefore, the most compute-efficient training strategy is to counterintuitively train extremely large models but stop after a small number of iterations. This leads to an apparent trade-off between the training efficiency of large Transformer models and the inference efficiency of small Transformer models. However, we show that large models are more robust to compression techniques such as quantization and pruning than small models. Consequently, one can get the best of both worlds: heavily compressed, large models achieve higher accuracy than lightly compressed, small models.

Background: Recently, an extensive amount of research has been focused on compressing and accelerating Deep Neural Networks (DNNs). So far, high compression rate algorithms required the entire training dataset, or its subset, for fine-tuning and low precision calibration process. However, this requirement is unacceptable when sensitive data is involved as in medical and biometric use-cases. Contributions: We present three methods for generating synthetic samples from trained models. Then, we demonstrate how these samples can be used to fine-tune or to calibrate quantized models with negligible accuracy degradation compared to the original training set --- without using any real data in the process. Furthermore, we suggest that our best performing method, leveraging intrinsic batch normalization layers' statistics of a trained model, can be used to evaluate data similarity. Our approach opens a path towards genuine data-free model compression, alleviating the need for training data during deployment.

Deep convolutional neural networks (CNNs) have recently achieved great success in many visual recognition tasks. However, existing deep neural network models are computationally expensive and memory intensive, hindering their deployment in devices with low memory resources or in applications with strict latency requirements. Therefore, a natural thought is to perform model compression and acceleration in deep networks without significantly decreasing the model performance. During the past few years, tremendous progress has been made in this area. In this paper, we survey the recent advanced techniques for compacting and accelerating CNNs model developed. These techniques are roughly categorized into four schemes: parameter pruning and sharing, low-rank factorization, transferred/compact convolutional filters, and knowledge distillation. Methods of parameter pruning and sharing will be described at the beginning, after that the other techniques will be introduced. For each scheme, we provide insightful analysis regarding the performance, related applications, advantages, and drawbacks etc. Then we will go through a few very recent additional successful methods, for example, dynamic capacity networks and stochastic depths networks. After that, we survey the evaluation matrix, the main datasets used for evaluating the model performance and recent benchmarking efforts. Finally, we conclude this paper, discuss remaining challenges and possible directions on this topic.