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Fairness is steadily becoming a crucial requirement of Machine Learning (ML) systems. A particularly important notion is subgroup fairness, i.e., fairness in subgroups of individuals that are defined by more than one attributes. Identifying bias in subgroups can become both computationally challenging, as well as problematic with respect to comprehensibility and intuitiveness of the finding to end users. In this work we focus on the latter aspects; we propose an explainability method tailored to identifying potential bias in subgroups and visualizing the findings in a user friendly manner to end users. In particular, we extend the ALE plots explainability method, proposing FALE (Fairness aware Accumulated Local Effects) plots, a method for measuring the change in fairness for an affected population corresponding to different values of a feature (attribute). We envision FALE to function as an efficient, user friendly, comprehensible and reliable first-stage tool for identifying subgroups with potential bias issues.

In the realm of scientific computing, both Julia and Python have established themselves as powerful tools. Within the context of High Energy Physics (HEP) data analysis, Python has been traditionally favored, yet there exists a compelling case for migrating legacy software to Julia. This article focuses on language interoperability, specifically exploring how Awkward Array data structures can bridge the gap between Julia and Python. The talk offers insights into key considerations such as memory management, data buffer copies, and dependency handling. It delves into the performance enhancements achieved by invoking Julia from Python and vice versa, particularly for intensive array-oriented calculations involving large-scale, though not excessively dimensional, arrays of HEP data. The advantages and challenges inherent in achieving interoperability between Julia and Python in the domain of scientific computing are discussed.

Graph Neural Networks (GNNs) are emerging as a formidable tool for processing non-euclidean data across various domains, ranging from social network analysis to bioinformatics. Despite their effectiveness, their adoption has not been pervasive because of scalability challenges associated with large-scale graph datasets, particularly when leveraging message passing. To tackle these challenges, we introduce NeuraChip, a novel GNN spatial accelerator based on Gustavson's algorithm. NeuraChip decouples the multiplication and addition computations in sparse matrix multiplication. This separation allows for independent exploitation of their unique data dependencies, facilitating efficient resource allocation. We introduce a rolling eviction strategy to mitigate data idling in on-chip memory as well as address the prevalent issue of memory bloat in sparse graph computations. Furthermore, the compute resource load balancing is achieved through a dynamic reseeding hash-based mapping, ensuring uniform utilization of computing resources agnostic of sparsity patterns. Finally, we present NeuraSim, an open-source, cycle-accurate, multi-threaded, modular simulator for comprehensive performance analysis. Overall, NeuraChip presents a significant improvement, yielding an average speedup of 22.1x over Intel's MKL, 17.1x over NVIDIA's cuSPARSE, 16.7x over AMD's hipSPARSE, and 1.5x over prior state-of-the-art SpGEMM accelerator and 1.3x over GNN accelerator. The source code for our open-sourced simulator and performance visualizer is publicly accessible on GitHub //neurachip.us

Large Language Models (LLM) have become a popular approach for implementing Retrieval Augmented Generation (RAG) systems, and a significant amount of effort has been spent on building good models and metrics. In spite of increased recognition of the need for rigorous evaluation of RAG systems, few tools exist that go beyond the creation of model output and automatic calculation. We present InspectorRAGet, an introspection platform for RAG evaluation. InspectorRAGet allows the user to analyze aggregate and instance-level performance of RAG systems, using both human and algorithmic metrics as well as annotator quality. InspectorRAGet is suitable for multiple use cases and is available publicly to the community. The demo video is available at //youtu.be/MJhe8QIXcEc

Deep Neural Networks (DNNs) have shown great promise in various domains. Alongside these developments, vulnerabilities associated with DNN training, such as backdoor attacks, are a significant concern. These attacks involve the subtle insertion of triggers during model training, allowing for manipulated predictions. More recently, DNNs for tabular data have gained increasing attention due to the rise of transformer models. Our research presents a comprehensive analysis of backdoor attacks on tabular data using DNNs, mainly focusing on transformers. We also propose a novel approach for trigger construction: an in-bounds attack, which provides excellent attack performance while maintaining stealthiness. Through systematic experimentation across benchmark datasets, we uncover that transformer-based DNNs for tabular data are highly susceptible to backdoor attacks, even with minimal feature value alterations. We also verify that our attack can be generalized to other models, like XGBoost and DeepFM. Our results demonstrate up to 100% attack success rate with negligible clean accuracy drop. Furthermore, we evaluate several defenses against these attacks, identifying Spectral Signatures as the most effective. Nevertheless, our findings highlight the need to develop tabular data-specific countermeasures to defend against backdoor attacks.

From FORTRAN to NumPy, arrays have revolutionized how we express computation. However, arrays in these, and almost all prominent systems, can only handle dense rectilinear integer grids. Real world arrays often contain underlying structure, such as sparsity, runs of repeated values, or symmetry. Support for structured data is fragmented and incomplete. Existing frameworks limit the array structures and program control flow they support to better simplify the problem. In this work, we propose a new programming language, Finch, which supports both flexible control flow and diverse data structures. Finch facilitates a programming model which resolves the challenges of computing over structured arrays by combining control flow and data structures into a common representation where they can be co-optimized. Finch automatically specializes control flow to data so that performance engineers can focus on experimenting with many algorithms. Finch supports a familiar programming language of loops, statements, ifs, breaks, etc., over a wide variety of array structures, such as sparsity, run-length-encoding, symmetry, triangles, padding, or blocks. Finch reliably utilizes the key properties of structure, such as structural zeros, repeated values, or clustered non-zeros. We show that this leads to dramatic speedups in operations such as SpMV and SpGEMM, image processing, graph analytics, and a high-level tensor operator fusion interface.

Multiple instance learning (MIL) is a powerful tool to solve the weakly supervised classification in whole slide image (WSI) based pathology diagnosis. However, the current MIL methods are usually based on independent and identical distribution hypothesis, thus neglect the correlation among different instances. To address this problem, we proposed a new framework, called correlated MIL, and provided a proof for convergence. Based on this framework, we devised a Transformer based MIL (TransMIL), which explored both morphological and spatial information. The proposed TransMIL can effectively deal with unbalanced/balanced and binary/multiple classification with great visualization and interpretability. We conducted various experiments for three different computational pathology problems and achieved better performance and faster convergence compared with state-of-the-art methods. The test AUC for the binary tumor classification can be up to 93.09% over CAMELYON16 dataset. And the AUC over the cancer subtypes classification can be up to 96.03% and 98.82% over TCGA-NSCLC dataset and TCGA-RCC dataset, respectively.

Most existing knowledge graphs suffer from incompleteness, which can be alleviated by inferring missing links based on known facts. One popular way to accomplish this is to generate low-dimensional embeddings of entities and relations, and use these to make inferences. ConvE, a recently proposed approach, applies convolutional filters on 2D reshapings of entity and relation embeddings in order to capture rich interactions between their components. However, the number of interactions that ConvE can capture is limited. In this paper, we analyze how increasing the number of these interactions affects link prediction performance, and utilize our observations to propose InteractE. InteractE is based on three key ideas -- feature permutation, a novel feature reshaping, and circular convolution. Through extensive experiments, we find that InteractE outperforms state-of-the-art convolutional link prediction baselines on FB15k-237. Further, InteractE achieves an MRR score that is 9%, 7.5%, and 23% better than ConvE on the FB15k-237, WN18RR and YAGO3-10 datasets respectively. The results validate our central hypothesis -- that increasing feature interaction is beneficial to link prediction performance. We make the source code of InteractE available to encourage reproducible research.

Knowledge graphs are important resources for many artificial intelligence tasks but often suffer from incompleteness. In this work, we propose to use pre-trained language models for knowledge graph completion. We treat triples in knowledge graphs as textual sequences and propose a novel framework named Knowledge Graph Bidirectional Encoder Representations from Transformer (KG-BERT) to model these triples. Our method takes entity and relation descriptions of a triple as input and computes scoring function of the triple with the KG-BERT language model. Experimental results on multiple benchmark knowledge graphs show that our method can achieve state-of-the-art performance in triple classification, link prediction and relation prediction tasks.

Deep reinforcement learning has recently shown many impressive successes. However, one major obstacle towards applying such methods to real-world problems is their lack of data-efficiency. To this end, we propose the Bottleneck Simulator: a model-based reinforcement learning method which combines a learned, factorized transition model of the environment with rollout simulations to learn an effective policy from few examples. The learned transition model employs an abstract, discrete (bottleneck) state, which increases sample efficiency by reducing the number of model parameters and by exploiting structural properties of the environment. We provide a mathematical analysis of the Bottleneck Simulator in terms of fixed points of the learned policy, which reveals how performance is affected by four distinct sources of error: an error related to the abstract space structure, an error related to the transition model estimation variance, an error related to the transition model estimation bias, and an error related to the transition model class bias. Finally, we evaluate the Bottleneck Simulator on two natural language processing tasks: a text adventure game and a real-world, complex dialogue response selection task. On both tasks, the Bottleneck Simulator yields excellent performance beating competing approaches.