Dimensionality reduction (DR) techniques inherently distort the original structure of input high-dimensional data, producing imperfect low-dimensional embeddings. Diverse distortion measures have thus been proposed to evaluate the reliability of DR embeddings. However, implementing and executing distortion measures in practice has so far been time-consuming and tedious. To address this issue, we present ZADU, a Python library that provides distortion measures. ZADU is not only easy to install and execute but also enables comprehensive evaluation of DR embeddings through three key features. First, the library covers a wide range of distortion measures. Second, it automatically optimizes the execution of distortion measures, substantially reducing the running time required to execute multiple measures. Last, the library informs how individual points contribute to the overall distortions, facilitating the detailed analysis of DR embeddings. By simulating a real-world scenario of optimizing DR embeddings, we verify that our optimization scheme substantially reduces the time required to execute distortion measures. Finally, as an application of ZADU, we present another library called ZADUVis that allows users to easily create distortion visualizations that depict the extent to which each region of an embedding suffers from distortions.
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Large molecular representation models pre-trained on massive unlabeled data have shown great success in predicting molecular properties. However, these models may tend to overfit the fine-tuning data, resulting in over-confident predictions on test data that fall outside of the training distribution. To address this issue, uncertainty quantification (UQ) methods can be used to improve the models' calibration of predictions. Although many UQ approaches exist, not all of them lead to improved performance. While some studies have included UQ to improve molecular pre-trained models, the process of selecting suitable backbone and UQ methods for reliable molecular uncertainty estimation remains underexplored. To address this gap, we present MUBen, which evaluates different UQ methods for state-of-the-art backbone molecular representation models to investigate their capabilities. By fine-tuning various backbones using different molecular descriptors as inputs with UQ methods from different categories, we critically assess the influence of architectural decisions and training strategies. Our study offers insights for selecting UQ for backbone models, which can facilitate research on uncertainty-critical applications in fields such as materials science and drug discovery.
Identification of standard mediated effects such as the natural indirect effect relies on heavy causal assumptions. By circumventing such assumptions, so-called randomized interventional indirect effects have gained popularity in the mediation literature. Here, I introduce properties one might demand of an indirect effect measure in order for it to have a true mediational interpretation. For instance, the sharp null criterion requires an indirect effect measure to be null whenever no individual-level indirect effect exists. I show that without stronger assumptions, randomized interventional indirect effects do not satisfy such criteria. I additionally discuss alternative causal interpretations of such effects.
Resource-constrained robots often suffer from energy inefficiencies, underutilized computational abilities due to inadequate task allocation, and a lack of robustness in dynamic environments, all of which strongly affect their performance. This paper introduces DREAM - Decentralized Reinforcement Learning for Exploration and Efficient Energy Management in Multi-Robot Systems, a comprehensive framework that optimizes the allocation of resources for efficient exploration. It advances beyond conventional heuristic-based task planning as observed conventionally. The framework incorporates Operational Range Estimation using Reinforcement Learning to perform exploration and obstacle avoidance in unfamiliar terrains. DREAM further introduces an Energy Consumption Model for goal allocation, thereby ensuring mission completion under constrained resources using a Graph Neural Network. This approach also ensures that the entire Multi-Robot System can survive for an extended period of time for further missions compared to the conventional approach of randomly allocating goals, which compromises one or more agents. Our approach adapts to prioritizing agents in real-time, showcasing remarkable resilience against dynamic environments. This robust solution was evaluated in various simulated environments, demonstrating adaptability and applicability across diverse scenarios. We observed a substantial improvement of about 25% over the baseline method, leading the way for future research in resource-constrained robotics.
The DEVStone benchmark allows us to evaluate the performance of discrete-event simulators based on the DEVS formalism. It provides model sets with different characteristics, enabling the analysis of specific issues of simulation engines. However, this heterogeneity hinders the comparison of the results among studies, as the results obtained on each research work depend on the chosen subset of DEVStone models. We define the DEVStone metric based on the DEVStone synthetic benchmark and provide a mechanism for specifying objective ratings for DEVS-based simulators. This metric corresponds to the average number of times that a simulator can execute a selection of 12 DEVStone models in one minute. The variety of the chosen models ensures we measure different particularities provided by DEVStone. The proposed metric allows us to compare various simulators and to assess the impact of new features on their performance. We use the DEVStone metric to compare some popular DEVS-based simulators.
The advancement of manufacturing technologies has enabled the integration of more intellectual property (IP) cores on the same system-on-chip (SoC). Scalable and high throughput on-chip communication architecture has become a vital component in today's SoCs. Diverse technologies such as electrical, wireless, optical, and hybrid are available for on-chip communication with different architectures supporting them. Security of the on-chip communication is crucial because exploiting any vulnerability would be a goldmine for an attacker. In this survey, we provide a comprehensive review of threat models, attacks, and countermeasures over diverse on-chip communication technologies as well as sophisticated architectures.
Image retrieval methods based on CNN descriptors rely on metric learning from a large number of diverse examples of positive and negative image pairs. Domains, such as night-time images, with limited availability and variability of training data suffer from poor retrieval performance even with methods performing well on standard benchmarks. We propose to train a GAN-based synthetic-image generator, translating available day-time image examples into night images. Such a generator is used in metric learning as a form of augmentation, supplying training data to the scarce domain. Various types of generators are evaluated and analyzed. We contribute with a novel light-weight GAN architecture that enforces the consistency between the original and translated image through edge consistency. The proposed architecture also allows a simultaneous training of an edge detector that operates on both night and day images. To further increase the variability in the training examples and to maximize the generalization of the trained model, we propose a novel method of diverse anchor mining. The proposed method improves over the state-of-the-art results on a standard Tokyo 24/7 day-night retrieval benchmark while preserving the performance on Oxford and Paris datasets. This is achieved without the need of training image pairs of matching day and night images. The source code is available at //github.com/mohwald/gandtr .
Cloud computing platforms are progressively adopting Field Programmable Gate Arrays to deploy specialized hardware accelerators for specific computational tasks. However, the security of FPGA-based bitstream for Intellectual Property, IP cores from unauthorized interception in cloud environments remains a prominent concern. Existing methodologies for protection of such bitstreams possess several limitations, such as requiring a large number of keys, tying bitstreams to specific FPGAs, and relying on trusted third parties. This paper proposes Aggregate Encryption and Individual Decryption, a cryptosystem based on key aggregation to enhance the security of FPGA-based bitstream for IP cores and to address the pitfalls of previous related works. In our proposed scheme, IP providers can encrypt their bitstreams with a single key for a set S of FPGA boards, with which the bitstreams can directly be decrypted on any of the FPGA boards in S. Aggregate encryption of the key is performed in a way which ensures that the key can solely be obtained onboard through individual decryption employing the board's private key, thus facilitating secure key provisioning. The proposed cryptosystem is evaluated mainly on Zynq FPGAs. The outcomes demonstrate that our cryptosystem not only outperforms existing techniques with respect to resource, time and energy significantly but also upholds robust security assurances.
With the exponential surge in diverse multi-modal data, traditional uni-modal retrieval methods struggle to meet the needs of users demanding access to data from various modalities. To address this, cross-modal retrieval has emerged, enabling interaction across modalities, facilitating semantic matching, and leveraging complementarity and consistency between different modal data. Although prior literature undertook a review of the cross-modal retrieval field, it exhibits numerous deficiencies pertaining to timeliness, taxonomy, and comprehensiveness. This paper conducts a comprehensive review of cross-modal retrieval's evolution, spanning from shallow statistical analysis techniques to vision-language pre-training models. Commencing with a comprehensive taxonomy grounded in machine learning paradigms, mechanisms, and models, the paper then delves deeply into the principles and architectures underpinning existing cross-modal retrieval methods. Furthermore, it offers an overview of widely used benchmarks, metrics, and performances. Lastly, the paper probes the prospects and challenges that confront contemporary cross-modal retrieval, while engaging in a discourse on potential directions for further progress in the field. To facilitate the research on cross-modal retrieval, we develop an open-source code repository at //github.com/BMC-SDNU/Cross-Modal-Retrieval.
Knowledge graph embedding (KGE) is a increasingly popular technique that aims to represent entities and relations of knowledge graphs into low-dimensional semantic spaces for a wide spectrum of applications such as link prediction, knowledge reasoning and knowledge completion. In this paper, we provide a systematic review of existing KGE techniques based on representation spaces. Particularly, we build a fine-grained classification to categorise the models based on three mathematical perspectives of the representation spaces: (1) Algebraic perspective, (2) Geometric perspective, and (3) Analytical perspective. We introduce the rigorous definitions of fundamental mathematical spaces before diving into KGE models and their mathematical properties. We further discuss different KGE methods over the three categories, as well as summarise how spatial advantages work over different embedding needs. By collating the experimental results from downstream tasks, we also explore the advantages of mathematical space in different scenarios and the reasons behind them. We further state some promising research directions from a representation space perspective, with which we hope to inspire researchers to design their KGE models as well as their related applications with more consideration of their mathematical space properties.
In pace with developments in the research field of artificial intelligence, knowledge graphs (KGs) have attracted a surge of interest from both academia and industry. As a representation of semantic relations between entities, KGs have proven to be particularly relevant for natural language processing (NLP), experiencing a rapid spread and wide adoption within recent years. Given the increasing amount of research work in this area, several KG-related approaches have been surveyed in the NLP research community. However, a comprehensive study that categorizes established topics and reviews the maturity of individual research streams remains absent to this day. Contributing to closing this gap, we systematically analyzed 507 papers from the literature on KGs in NLP. Our survey encompasses a multifaceted review of tasks, research types, and contributions. As a result, we present a structured overview of the research landscape, provide a taxonomy of tasks, summarize our findings, and highlight directions for future work.
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