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In this paper, we consider the $k$-approximate pattern matching problem under differential privacy, where the goal is to report or count all substrings of a given string $S$ which have a Hamming distance at most $k$ to a pattern $P$, or decide whether such a substring exists. In our definition of privacy, individual positions of the string $S$ are protected. To be able to answer queries under differential privacy, we allow some slack on $k$, i.e. we allow reporting or counting substrings of $S$ with a distance at most $(1+\gamma)k+\alpha$ to $P$, for a multiplicative error $\gamma$ and an additive error $\alpha$. We analyze which values of $\alpha$ and $\gamma$ are necessary or sufficient to solve the $k$-approximate pattern matching problem while satisfying $\epsilon$-differential privacy. Let $n$ denote the length of $S$. We give 1) an $\epsilon$-differentially private algorithm with an additive error of $O(\epsilon^{-1}\log n)$ and no multiplicative error for the existence variant; 2) an $\epsilon$-differentially private algorithm with an additive error $O(\epsilon^{-1}\max(k,\log n)\cdot\log n)$ for the counting variant; 3) an $\epsilon$-differentially private algorithm with an additive error of $O(\epsilon^{-1}\log n)$ and multiplicative error $O(1)$ for the reporting variant for a special class of patterns. The error bounds hold with high probability. All of these algorithms return a witness, that is, if there exists a substring of $S$ with distance at most $k$ to $P$, then the algorithm returns a substring of $S$ with distance at most $(1+\gamma)k+\alpha$ to $P$. Further, we complement these results by a lower bound, showing that any algorithm for the existence variant which also returns a witness must have an additive error of $\Omega(\epsilon^{-1}\log n)$ with constant probability.

Neural ordinary differential equations (NODEs) have been proven useful for learning non-linear dynamics of arbitrary trajectories. However, current NODE methods capture variations across trajectories only via the initial state value or by auto-regressive encoder updates. In this work, we introduce Modulated Neural ODEs (MoNODEs), a novel framework that sets apart dynamics states from underlying static factors of variation and improves the existing NODE methods. In particular, we introduce $\textit{time-invariant modulator variables}$ that are learned from the data. We incorporate our proposed framework into four existing NODE variants. We test MoNODE on oscillating systems, videos and human walking trajectories, where each trajectory has trajectory-specific modulation. Our framework consistently improves the existing model ability to generalize to new dynamic parameterizations and to perform far-horizon forecasting. In addition, we verify that the proposed modulator variables are informative of the true unknown factors of variation as measured by $R^2$ scores.

We provide a simple and natural solution to the problem of generating all $2^n \cdot n!$ signed permutations of $[n] = \{1,2,\ldots,n\}$. Our solution provides a pleasing generalization of the most famous ordering of permutations: plain changes (Steinhaus-Johnson-Trotter algorithm). In plain changes, the $n!$ permutations of $[n]$ are ordered so that successive permutations differ by swapping a pair of adjacent symbols, and the order is often visualized as a weaving pattern involving $n$ ropes. Here we model a signed permutation using $n$ ribbons with two distinct sides, and each successive configuration is created by twisting (i.e., swapping and turning over) two neighboring ribbons or a single ribbon. By greedily prioritizing $2$-twists of the largest symbol before $1$-twists of the largest symbol, we create a signed version of plain change's memorable zig-zag pattern. We provide a loopless algorithm (i.e., worst-case $\mathcal{O}(1)$-time per object) by extending the well-known mixed-radix Gray code algorithm.

We investigate the problem of approximating an incomplete preference relation $\succsim$ on a finite set by a complete preference relation. We aim to obtain this approximation in such a way that the choices on the basis of two preferences, one incomplete, the other complete, have the smallest possible discrepancy in the aggregate. To this end, we use the top-difference metric on preferences, and define a best complete approximation of $\succsim$ as a complete preference relation nearest to $\succsim$ relative to this metric. We prove that such an approximation must be a maximal completion of $\succsim$, and that it is, in fact, any one completion of $\succsim$ with the largest index. Finally, we use these results to provide a sufficient condition for the best complete approximation of a preference to be its canonical completion. This leads to closed-form solutions to the best approximation problem in the case of several incomplete preference relations of interest.

The matrix semigroup membership problem asks, given square matrices $M,M_1,\ldots,M_k$ of the same dimension, whether $M$ lies in the semigroup generated by $M_1,\ldots,M_k$. It is classical that this problem is undecidable in general but decidable in case $M_1,\ldots,M_k$ commute. In this paper we consider the problem of whether, given $M_1,\ldots,M_k$, the semigroup generated by $M_1,\ldots,M_k$ contains a non-negative matrix. We show that in case $M_1,\ldots,M_k$ commute, this problem is decidable subject to Schanuel's Conjecture. We show also that the problem is undecidable if the commutativity assumption is dropped. A key lemma in our decidability result is a procedure to determine, given a matrix $M$, whether the sequence of matrices $(M^n)_{n\geq 0}$ is ultimately nonnegative. This answers a problem posed by S. Akshay (arXiv:2205.09190). The latter result is in stark contrast to the notorious fact that it is not known how to determine effectively whether for any specific matrix index $(i,j)$ the sequence $(M^n)_{i,j}$ is ultimately nonnegative (which is a formulation of the Ultimate Positivity Problem for linear recurrence sequences).

In this paper, we investigate the problem of deciding whether two random databases $\mathsf{X}\in\mathcal{X}^{n\times d}$ and $\mathsf{Y}\in\mathcal{Y}^{n\times d}$ are statistically dependent or not. This is formulated as a hypothesis testing problem, where under the null hypothesis, these two databases are statistically independent, while under the alternative, there exists an unknown row permutation $\sigma$, such that $\mathsf{X}$ and $\mathsf{Y}^\sigma$, a permuted version of $\mathsf{Y}$, are statistically dependent with some known joint distribution, but have the same marginal distributions as the null. We characterize the thresholds at which optimal testing is information-theoretically impossible and possible, as a function of $n$, $d$, and some spectral properties of the generative distributions of the datasets. For example, we prove that if a certain function of the eigenvalues of the likelihood function and $d$, is below a certain threshold, as $d\to\infty$, then weak detection (performing slightly better than random guessing) is statistically impossible, no matter what the value of $n$ is. This mimics the performance of an efficient test that thresholds a centered version of the log-likelihood function of the observed matrices. We also analyze the case where $d$ is fixed, for which we derive strong (vanishing error) and weak detection lower and upper bounds.

Molecular modeling at the quantum level requires choosing a parameterization of the wavefunction that both respects the required particle symmetries, and is scalable to systems of many particles. For the simulation of fermions, valid parameterizations must be antisymmetric with respect to the exchange of particles. Typically, antisymmetry is enforced by leveraging the anti-symmetry of determinants with respect to the exchange of matrix rows, but this involves computing a full determinant each time the wavefunction is evaluated. Instead, we introduce a new antisymmetrization layer derived from sorting, the $\textit{sortlet}$, which scales as $O(N \log N)$ with regards to the number of particles -- in contrast to $O(N^3)$ for the determinant. We show numerically that applying this anti-symmeterization layer on top of an attention based neural-network backbone yields a flexible wavefunction parameterization capable of reaching chemical accuracy when approximating the ground state of first-row atoms and small molecules.

In the Wishart model for sparse PCA we are given $n$ samples $Y_1,\ldots, Y_n$ drawn independently from a $d$-dimensional Gaussian distribution $N({0, Id + \beta vv^\top})$, where $\beta > 0$ and $v\in \mathbb{R}^d$ is a $k$-sparse unit vector, and we wish to recover $v$ (up to sign). We show that if $n \ge \Omega(d)$, then for every $t \ll k$ there exists an algorithm running in time $n\cdot d^{O(t)}$ that solves this problem as long as \[ \beta \gtrsim \frac{k}{\sqrt{nt}}\sqrt{\ln({2 + td/k^2})}\,. \] Prior to this work, the best polynomial time algorithm in the regime $k\approx \sqrt{d}$, called \emph{Covariance Thresholding} (proposed in [KNV15a] and analyzed in [DM14]), required $\beta \gtrsim \frac{k}{\sqrt{n}}\sqrt{\ln({2 + d/k^2})}$. For large enough constant $t$ our algorithm runs in polynomial time and has better guarantees than Covariance Thresholding. Previously known algorithms with such guarantees required quasi-polynomial time $d^{O(\log d)}$. In addition, we show that our techniques work with sparse PCA with adversarial perturbations studied in [dKNS20]. This model generalizes not only sparse PCA, but also other problems studied in prior works, including the sparse planted vector problem. As a consequence, we provide polynomial time algorithms for the sparse planted vector problem that have better guarantees than the state of the art in some regimes. Our approach also works with the Wigner model for sparse PCA. Moreover, we show that it is possible to combine our techniques with recent results on sparse PCA with symmetric heavy-tailed noise [dNNS22]. In particular, in the regime $k \approx \sqrt{d}$ we get the first polynomial time algorithm that works with symmetric heavy-tailed noise, while the algorithm from [dNNS22]. requires quasi-polynomial time in these settings.

Recently, a considerable literature has grown up around the theme of Graph Convolutional Network (GCN). How to effectively leverage the rich structural information in complex graphs, such as knowledge graphs with heterogeneous types of entities and relations, is a primary open challenge in the field. Most GCN methods are either restricted to graphs with a homogeneous type of edges (e.g., citation links only), or focusing on representation learning for nodes only instead of jointly propagating and updating the embeddings of both nodes and edges for target-driven objectives. This paper addresses these limitations by proposing a novel framework, namely the Knowledge Embedding based Graph Convolutional Network (KE-GCN), which combines the power of GCNs in graph-based belief propagation and the strengths of advanced knowledge embedding (a.k.a. knowledge graph embedding) methods, and goes beyond. Our theoretical analysis shows that KE-GCN offers an elegant unification of several well-known GCN methods as specific cases, with a new perspective of graph convolution. Experimental results on benchmark datasets show the advantageous performance of KE-GCN over strong baseline methods in the tasks of knowledge graph alignment and entity classification.

We investigate a lattice-structured LSTM model for Chinese NER, which encodes a sequence of input characters as well as all potential words that match a lexicon. Compared with character-based methods, our model explicitly leverages word and word sequence information. Compared with word-based methods, lattice LSTM does not suffer from segmentation errors. Gated recurrent cells allow our model to choose the most relevant characters and words from a sentence for better NER results. Experiments on various datasets show that lattice LSTM outperforms both word-based and character-based LSTM baselines, achieving the best results.