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Brain computer interfaces systems are controlled by users through neurophysiological input for a variety of applications including communication, environmental control, motor rehabilitation, and cognitive training. Although individuals with severe speech and physical impairment are the primary users of this technology, BCIs have emerged as a potential tool for broader populations, especially with regards to delivering cognitive training or interventions with neurofeedback. The goal of this study was to investigate the feasibility of using a BCI system with neurofeedback as an intervention for people with mild Alzheimer's disease. The study focused on visual attention and language since ad is often associated with functional impairments in language and reading. The study enrolled five adults with mild ad in a nine to thirteen week BCI EEG based neurofeedback intervention to improve attention and reading skills. Two participants completed intervention entirely. The remaining three participants could not complete the intervention phase because of restrictions related to covid. Pre and post assessment measures were used to assess reliability of outcome measures and generalization of treatment to functional reading, processing speed, attention, and working memory skills. Participants demonstrated steady improvement in most cognitive measures across experimental phases, although there was not a significant effect of NFB on most measures of attention. One subject demonstrated significantly significant improvement in letter cancellation during NFB. All participants with mild AD learned to operate a BCI system with training. Results have broad implications for the design and use of bci systems for participants with cognitive impairment. Preliminary evidence justifies implementing NFB-based cognitive measures in AD.

Presence-absence data is defined by vectors or matrices of zeroes and ones, where the ones usually indicate a "presence" in a certain place. Presence-absence data occur for example when investigating geographical species distributions, genetic information, or the occurrence of certain terms in texts. There are many applications for clustering such data; one example is to find so-called biotic elements, i.e., groups of species that tend to occur together geographically. Presence-absence data can be clustered in various ways, namely using a latent class mixture approach with local independence, distance-based hierarchical clustering with the Jaccard distance, or also using clustering methods for continuous data on a multidimensional scaling representation of the distances. These methods are conceptually very different and can therefore not easily be compared theoretically. We compare their performance with a comprehensive simulation study based on models for species distributions. This has been accepted for publication in Ferreira, J., Bekker, A., Arashi, M. and Chen, D. (eds.) Innovations in multivariate statistical modelling: navigating theoretical and multidisciplinary domains, Springer Emerging Topics in Statistics and Biostatistics.

This paper proposes a mathematical approach for robust control of a nanoscale drug delivery system in treatment of atherosclerosis. First, a new nonlinear lumped model is introduced for mass transport in the arterial wall, and its accuracy is evaluated in comparison with the original distributed-parameter model. Then, based on the notion of sliding-mode control, an abstract model is designed for a smart drug delivery nanoparticle. In contrast to the competing strategies on nanorobotics, the proposed nanoparticles carry simpler hardware to penetrate the interior arterial wall and become more technologically feasible. Finally, from this lumped model and the nonlinear control theory, the overall system's stability is mathematically proven in the presence of uncertainty. Simulation results on a well-known model, and comparisons with earlier benchmark approaches, reveals that even when the LDL concentration in the lumen is high, the proposed nanoscale drug delivery system successfully reduces the drug consumption levels by as much as 16% and the LDL level in the Endothelium, Intima, Internal Elastic Layer (IEL) and Media layers of an unhealthy arterial wall by as much as 14.6%, 50.5%, 51.8%, and 64.4%, respectively.

Community detection, a fundamental task for network analysis, aims to partition a network into multiple sub-structures to help reveal their latent functions. Community detection has been extensively studied in and broadly applied to many real-world network problems. Classical approaches to community detection typically utilize probabilistic graphical models and adopt a variety of prior knowledge to infer community structures. As the problems that network methods try to solve and the network data to be analyzed become increasingly more sophisticated, new approaches have also been proposed and developed, particularly those that utilize deep learning and convert networked data into low dimensional representation. Despite all the recent advancement, there is still a lack of insightful understanding of the theoretical and methodological underpinning of community detection, which will be critically important for future development of the area of network analysis. In this paper, we develop and present a unified architecture of network community-finding methods to characterize the state-of-the-art of the field of community detection. Specifically, we provide a comprehensive review of the existing community detection methods and introduce a new taxonomy that divides the existing methods into two categories, namely probabilistic graphical model and deep learning. We then discuss in detail the main idea behind each method in the two categories. Furthermore, to promote future development of community detection, we release several benchmark datasets from several problem domains and highlight their applications to various network analysis tasks. We conclude with discussions of the challenges of the field and suggestions of possible directions for future research.

We evaluate the effectiveness of semi-supervised learning (SSL) on a realistic benchmark where data exhibits considerable class imbalance and contains images from novel classes. Our benchmark consists of two fine-grained classification datasets obtained by sampling classes from the Aves and Fungi taxonomy. We find that recently proposed SSL methods provide significant benefits, and can effectively use out-of-class data to improve performance when deep networks are trained from scratch. Yet their performance pales in comparison to a transfer learning baseline, an alternative approach for learning from a few examples. Furthermore, in the transfer setting, while existing SSL methods provide improvements, the presence of out-of-class is often detrimental. In this setting, standard fine-tuning followed by distillation-based self-training is the most robust. Our work suggests that semi-supervised learning with experts on realistic datasets may require different strategies than those currently prevalent in the literature.

The information bottleneck (IB) method is a technique for extracting information that is relevant for predicting the target random variable from the source random variable, which is typically implemented by optimizing the IB Lagrangian that balances the compression and prediction terms. However, the IB Lagrangian is hard to optimize, and multiple trials for tuning values of Lagrangian multiplier are required. Moreover, we show that the prediction performance strictly decreases as the compression gets stronger during optimizing the IB Lagrangian. In this paper, we implement the IB method from the perspective of supervised disentangling. Specifically, we introduce Disentangled Information Bottleneck (DisenIB) that is consistent on compressing source maximally without target prediction performance loss (maximum compression). Theoretical and experimental results demonstrate that our method is consistent on maximum compression, and performs well in terms of generalization, robustness to adversarial attack, out-of-distribution detection, and supervised disentangling.

Clustering is one of the most fundamental and wide-spread techniques in exploratory data analysis. Yet, the basic approach to clustering has not really changed: a practitioner hand-picks a task-specific clustering loss to optimize and fit the given data to reveal the underlying cluster structure. Some types of losses---such as k-means, or its non-linear version: kernelized k-means (centroid based), and DBSCAN (density based)---are popular choices due to their good empirical performance on a range of applications. Although every so often the clustering output using these standard losses fails to reveal the underlying structure, and the practitioner has to custom-design their own variation. In this work we take an intrinsically different approach to clustering: rather than fitting a dataset to a specific clustering loss, we train a recurrent model that learns how to cluster. The model uses as training pairs examples of datasets (as input) and its corresponding cluster identities (as output). By providing multiple types of training datasets as inputs, our model has the ability to generalize well on unseen datasets (new clustering tasks). Our experiments reveal that by training on simple synthetically generated datasets or on existing real datasets, we can achieve better clustering performance on unseen real-world datasets when compared with standard benchmark clustering techniques. Our meta clustering model works well even for small datasets where the usual deep learning models tend to perform worse.

We present our 7th place solution to the Gendered Pronoun Resolution challenge, which uses BERT without fine-tuning and a novel augmentation strategy designed for contextual embedding token-level tasks. Our method anonymizes the referent by replacing candidate names with a set of common placeholder names. Besides the usual benefits of effectively increasing training data size, this approach diversifies idiosyncratic information embedded in names. Using same set of common first names can also help the model recognize names better, shorten token length, and remove gender and regional biases associated with names. The system scored 0.1947 log loss in stage 2, where the augmentation contributed to an improvements of 0.04. Post-competition analysis shows that, when using different embedding layers, the system scores 0.1799 which would be third place.

The availability of large microarray data has led to a growing interest in biclustering methods in the past decade. Several algorithms have been proposed to identify subsets of genes and conditions according to different similarity measures and under varying constraints. In this paper we focus on the exclusive row biclustering problem for gene expression data sets, in which each row can only be a member of a single bicluster while columns can participate in multiple ones. This type of biclustering may be adequate, for example, for clustering groups of cancer patients where each patient (row) is expected to be carrying only a single type of cancer, while each cancer type is associated with multiple (and possibly overlapping) genes (columns). We present a novel method to identify these exclusive row biclusters through a combination of existing biclustering algorithms and combinatorial auction techniques. We devise an approach for tuning the threshold for our algorithm based on comparison to a null model in the spirit of the Gap statistic approach. We demonstrate our approach on both synthetic and real-world gene expression data and show its power in identifying large span non-overlapping rows sub matrices, while considering their unique nature. The Gap statistic approach succeeds in identifying appropriate thresholds in all our examples.

Visual object tracking is an important computer vision problem with numerous real-world applications including human-computer interaction, autonomous vehicles, robotics, motion-based recognition, video indexing, surveillance and security. In this paper, we aim to extensively review the latest trends and advances in the tracking algorithms and evaluate the robustness of trackers in the presence of noise. The first part of this work comprises a comprehensive survey of recently proposed tracking algorithms. We broadly categorize trackers into correlation filter based trackers and the others as non-correlation filter trackers. Each category is further classified into various types of trackers based on the architecture of the tracking mechanism. In the second part of this work, we experimentally evaluate tracking algorithms for robustness in the presence of additive white Gaussian noise. Multiple levels of additive noise are added to the Object Tracking Benchmark (OTB) 2015, and the precision and success rates of the tracking algorithms are evaluated. Some algorithms suffered more performance degradation than others, which brings to light a previously unexplored aspect of the tracking algorithms. The relative rank of the algorithms based on their performance on benchmark datasets may change in the presence of noise. Our study concludes that no single tracker is able to achieve the same efficiency in the presence of noise as under noise-free conditions; thus, there is a need to include a parameter for robustness to noise when evaluating newly proposed tracking algorithms.