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Amortized variational inference produces a posterior approximator that can compute a posterior approximation given any new observation. Unfortunately, there are few guarantees about the quality of these approximate posteriors. We propose Conformalized Amortized Neural Variational Inference (CANVI), a procedure that is scalable, easily implemented, and provides guaranteed marginal coverage. Given a collection of candidate amortized posterior approximators, CANVI constructs conformalized predictors based on each candidate, compares the predictors using a metric known as predictive efficiency, and returns the most efficient predictor. CANVI ensures that the resulting predictor constructs regions that contain the truth with high probability (exactly how high is prespecified by the user). CANVI is agnostic to design decisions in formulating the candidate approximators and only requires access to samples from the forward model, permitting its use in likelihood-free settings. We prove lower bounds on the predictive efficiency of the regions produced by CANVI and explore how the quality of a posterior approximation relates to the predictive efficiency of prediction regions based on that approximation. Finally, we demonstrate the accurate calibration and high predictive efficiency of CANVI on a suite of simulation-based inference benchmark tasks and an important scientific task: analyzing galaxy emission spectra.

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Differential privacy guarantees allow the results of a statistical analysis involving sensitive data to be released without compromising the privacy of any individual taking part. Achieving such guarantees generally requires the injection of noise, either directly into parameter estimates or into the estimation process. Instead of artificially introducing perturbations, sampling from Bayesian posterior distributions has been shown to be a special case of the exponential mechanism, producing consistent, and efficient private estimates without altering the data generative process. The application of current approaches has, however, been limited by their strong bounding assumptions which do not hold for basic models, such as simple linear regressors. To ameliorate this, we propose $\beta$D-Bayes, a posterior sampling scheme from a generalised posterior targeting the minimisation of the $\beta$-divergence between the model and the data generating process. This provides private estimation that is generally applicable without requiring changes to the underlying model and consistently learns the data generating parameter. We show that $\beta$D-Bayes produces more precise inference estimation for the same privacy guarantees, and further facilitates differentially private estimation via posterior sampling for complex classifiers and continuous regression models such as neural networks for the first time.

The Gaussian kernel and its traditional normalizations (e.g., row-stochastic) are popular approaches for assessing similarities between data points. Yet, they can be inaccurate under high-dimensional noise, especially if the noise magnitude varies considerably across the data, e.g., under heteroskedasticity or outliers. In this work, we investigate a more robust alternative -- the doubly stochastic normalization of the Gaussian kernel. We consider a setting where points are sampled from an unknown density on a low-dimensional manifold embedded in high-dimensional space and corrupted by possibly strong, non-identically distributed, sub-Gaussian noise. We establish that the doubly stochastic affinity matrix and its scaling factors concentrate around certain population forms, and provide corresponding finite-sample probabilistic error bounds. We then utilize these results to develop several tools for robust inference under general high-dimensional noise. First, we derive a robust density estimator that reliably infers the underlying sampling density and can substantially outperform the standard kernel density estimator under heteroskedasticity and outliers. Second, we obtain estimators for the pointwise noise magnitudes, the pointwise signal magnitudes, and the pairwise Euclidean distances between clean data points. Lastly, we derive robust graph Laplacian normalizations that accurately approximate various manifold Laplacians, including the Laplace Beltrami operator, improving over traditional normalizations in noisy settings. We exemplify our results in simulations and on real single-cell RNA-sequencing data. For the latter, we show that in contrast to traditional methods, our approach is robust to variability in technical noise levels across cell types.

One of the fundamental steps toward understanding a complex system is identifying variation at the scale of the system's components that is most relevant to behavior on a macroscopic scale. Mutual information is a natural means of linking variation across scales of a system due to its independence of the particular functional relationship between variables. However, estimating mutual information given high-dimensional, continuous-valued data is notoriously difficult, and the desideratum -- to reveal important variation in a comprehensible manner -- is only readily achieved through exhaustive search. Here we propose a practical, efficient, and broadly applicable methodology to decompose the information contained in a set of measurements by lossily compressing each measurement with machine learning. Guided by the distributed information bottleneck as a learning objective, the information decomposition sorts variation in the measurements of the system state by relevance to specified macroscale behavior, revealing the most important subsets of measurements for different amounts of predictive information. Additional granularity is achieved by inspection of the learned compression schemes: the variation transmitted during compression is composed of distinctions among measurement values that are most relevant to the macroscale behavior. We focus our analysis on two paradigmatic complex systems: a Boolean circuit and an amorphous material undergoing plastic deformation. In both examples, specific bits of entropy are identified out of the high entropy of the system state as most related to macroscale behavior for insight about the connection between micro- and macro- in the complex system. The identification of meaningful variation in data, with the full generality brought by information theory, is made practical for the study of complex systems.

Relation prediction on knowledge graphs (KGs) is a key research topic. Dominant embedding-based methods mainly focus on the transductive setting and lack the inductive ability to generalize to new entities for inference. Existing methods for inductive reasoning mostly mine the connections between entities, i.e., relational paths, without considering the nature of head and tail entities contained in the relational context. This paper proposes a novel method that captures both connections between entities and the intrinsic nature of entities, by simultaneously aggregating RElational Paths and cOntext with a unified hieRarchical Transformer framework, namely REPORT. REPORT relies solely on relation semantics and can naturally generalize to the fully-inductive setting, where KGs for training and inference have no common entities. In the experiments, REPORT performs consistently better than all baselines on almost all the eight version subsets of two fully-inductive datasets. Moreover. REPORT is interpretable by providing each element's contribution to the prediction results.

This article investigates uncertainty quantification of the generalized linear lasso~(GLL), a popular variable selection method in high-dimensional regression settings. In many fields of study, researchers use data-driven methods to select a subset of variables that are most likely to be associated with a response variable. However, such variable selection methods can introduce bias and increase the likelihood of false positives, leading to incorrect conclusions. In this paper, we propose a post-selection inference framework that addresses these issues and allows for valid statistical inference after variable selection using GLL. We show that our method provides accurate $p$-values and confidence intervals, while maintaining high statistical power. In a second stage, we focus on the sparse logistic regression, a popular classifier in high-dimensional statistics. We show with extensive numerical simulations that SIGLE is more powerful than state-of-the-art PSI methods. SIGLE relies on a new method to sample states from the distribution of observations conditional on the selection event. This method is based on a simulated annealing strategy whose energy is given by the first order conditions of the logistic lasso.

We show the sup-norm convergence of deep neural network estimators with a novel adversarial training scheme. For the nonparametric regression problem, it has been shown that an estimator using deep neural networks can achieve better performances in the sense of the $L2$-norm. In contrast, it is difficult for the neural estimator with least-squares to achieve the sup-norm convergence, due to the deep structure of neural network models. In this study, we develop an adversarial training scheme and investigate the sup-norm convergence of deep neural network estimators. First, we find that ordinary adversarial training makes neural estimators inconsistent. Second, we show that a deep neural network estimator achieves the optimal rate in the sup-norm sense by the proposed adversarial training with correction. We extend our adversarial training to general setups of a loss function and a data-generating function. Our experiments support the theoretical findings.

In this paper, we propose a general approach for explicit a posteriori error representation for convex minimization problems using basic convex duality relations. Exploiting discrete orthogonality relations in the space of element-wise constant vector fields as well as a discrete integration-by-parts formula between the Crouzeix-Raviart and the Raviart-Thomas element, all convex duality relations are transferred to a discrete level, making the explicit a posteriori error representation -- initially based on continuous arguments only -- practicable from a numerical point of view. In addition, we provide a generalized Marini formula for the primal solution that determines a discrete primal solution in terms of a given discrete dual solution. We benchmark all these concepts via the Rudin-Osher-Fatemi model. This leads to an adaptive algorithm that yields a (quasi-optimal) linear convergence rate.

The Bayesian paradigm has the potential to solve core issues of deep neural networks such as poor calibration and data inefficiency. Alas, scaling Bayesian inference to large weight spaces often requires restrictive approximations. In this work, we show that it suffices to perform inference over a small subset of model weights in order to obtain accurate predictive posteriors. The other weights are kept as point estimates. This subnetwork inference framework enables us to use expressive, otherwise intractable, posterior approximations over such subsets. In particular, we implement subnetwork linearized Laplace: We first obtain a MAP estimate of all weights and then infer a full-covariance Gaussian posterior over a subnetwork. We propose a subnetwork selection strategy that aims to maximally preserve the model's predictive uncertainty. Empirically, our approach is effective compared to ensembles and less expressive posterior approximations over full networks.

This paper focuses on the expected difference in borrower's repayment when there is a change in the lender's credit decisions. Classical estimators overlook the confounding effects and hence the estimation error can be magnificent. As such, we propose another approach to construct the estimators such that the error can be greatly reduced. The proposed estimators are shown to be unbiased, consistent, and robust through a combination of theoretical analysis and numerical testing. Moreover, we compare the power of estimating the causal quantities between the classical estimators and the proposed estimators. The comparison is tested across a wide range of models, including linear regression models, tree-based models, and neural network-based models, under different simulated datasets that exhibit different levels of causality, different degrees of nonlinearity, and different distributional properties. Most importantly, we apply our approaches to a large observational dataset provided by a global technology firm that operates in both the e-commerce and the lending business. We find that the relative reduction of estimation error is strikingly substantial if the causal effects are accounted for correctly.

Sampling methods (e.g., node-wise, layer-wise, or subgraph) has become an indispensable strategy to speed up training large-scale Graph Neural Networks (GNNs). However, existing sampling methods are mostly based on the graph structural information and ignore the dynamicity of optimization, which leads to high variance in estimating the stochastic gradients. The high variance issue can be very pronounced in extremely large graphs, where it results in slow convergence and poor generalization. In this paper, we theoretically analyze the variance of sampling methods and show that, due to the composite structure of empirical risk, the variance of any sampling method can be decomposed into \textit{embedding approximation variance} in the forward stage and \textit{stochastic gradient variance} in the backward stage that necessities mitigating both types of variance to obtain faster convergence rate. We propose a decoupled variance reduction strategy that employs (approximate) gradient information to adaptively sample nodes with minimal variance, and explicitly reduces the variance introduced by embedding approximation. We show theoretically and empirically that the proposed method, even with smaller mini-batch sizes, enjoys a faster convergence rate and entails a better generalization compared to the existing methods.

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