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Patch representation is crucial in automating various software engineering tasks, like determining patch accuracy or summarizing code changes. While recent research has employed deep learning for patch representation, focusing on token sequences or Abstract Syntax Trees (ASTs), they often miss the change's semantic intent and the context of modified lines. To bridge this gap, we introduce a novel method, Patcherizer. It delves into the intentions of context and structure, merging the surrounding code context with two innovative representations. These capture the intention in code changes and the intention in AST structural modifications pre and post-patch. This holistic representation aptly captures a patch's underlying intentions. Patcherizer employs graph convolutional neural networks for structural intention graph representation and transformers for intention sequence representation. We evaluated Patcherizer's embeddings' versatility in three areas: (1) Patch description generation, (2) Patch accuracy prediction, and (3) Patch intention identification. Our experiments demonstrate the representation's efficacy across all tasks, outperforming state-of-the-art methods. For example, in patch description generation, Patcherizer excels, showing an average boost of 19.39% in BLEU, 8.71% in ROUGE-L, and 34.03% in METEOR scores.

Branching and merging are common practices in collaborative software development, increasing developer's productivity. Despite such benefits, developers need to merge software and resolve merge conflicts. While modern merge techniques can resolve textual conflicts automatically, they fail when the conflict arises at the semantic level. Although semantic merge tools have been proposed, they are usually based on heavyweight static analyses or need explicit specifications of program behavior. In this work, we take a different route and propose SAM (SemAntic Merge), a semantic merge tool based on the automated generation of unit tests that are used as partial specifications. To evaluate SAM's feasibility for detecting conflicts, we perform an empirical study analyzing more than 80 pairs of changes integrated into common class elements from 51 merge scenarios. Furthermore, we also assess how the four unit-test generation tools used by SAM contribute to conflict identification. We propose and assess the adoption of Testability Transformations and Serialization. Our results show that SAM best performs when combining only the tests generated by Differential EvoSuite and EvoSuite and using the proposed Testability Transformations (nine detected conflicts out of 28). These results reinforce previous findings about the potential of using test-case generation to detect test conflicts.

Ontology embedding methods are powerful approaches to represent and reason over structured knowledge in various domains. One advantage of ontology embeddings over knowledge graph embeddings is their ability to capture and impose an underlying schema to which the model must conform. Despite advances, most current approaches do not guarantee that the resulting embedding respects the axioms the ontology entails. In this work, we formally prove that normalized ${\cal ELH}$ has the strong faithfulness property on convex geometric models, which means that there is an embedding that precisely captures the original ontology. We present a region-based geometric model for embedding normalized ${\cal ELH}$ ontologies into a continuous vector space. To prove strong faithfulness, our construction takes advantage of the fact that normalized ${\cal ELH}$ has a finite canonical model. We first prove the statement assuming (possibly) non-convex regions, allowing us to keep the required dimensions low. Then, we impose convexity on the regions and show the property still holds. Finally, we consider reasoning tasks on geometric models and analyze the complexity in the class of convex geometric models used for proving strong faithfulness.

The advent of exascale computing invites an assessment of existing best practices for developing application readiness on the world's largest supercomputers. This work details observations from the last four years in preparing scientific applications to run on the Oak Ridge Leadership Computing Facility's (OLCF) Frontier system. This paper addresses a range of topics in software including programmability, tuning, and portability considerations that are key to moving applications from existing systems to future installations. A set of representative workloads provides case studies for general system and software testing. We evaluate the use of early access systems for development across several generations of hardware. Finally, we discuss how best practices were identified and disseminated to the community through a wide range of activities including user-guides and trainings. We conclude with recommendations for ensuring application readiness on future leadership computing systems.

Statically analyzing dynamically-typed code is a challenging endeavor, as even seemingly trivial tasks such as determining the targets of procedure calls are non-trivial without knowing the types of objects at compile time. Addressing this challenge, gradual typing is increasingly added to dynamically-typed languages, a prominent example being TypeScript that introduces static typing to JavaScript. Gradual typing improves the developer's ability to verify program behavior, contributing to robust, secure and debuggable programs. In practice, however, users only sparsely annotate types directly. At the same time, conventional type inference faces performance-related challenges as program size grows. Statistical techniques based on machine learning offer faster inference, but although recent approaches demonstrate overall improved accuracy, they still perform significantly worse on user-defined types than on the most common built-in types. Limiting their real-world usefulness even more, they rarely integrate with user-facing applications. We propose CodeTIDAL5, a Transformer-based model trained to reliably predict type annotations. For effective result retrieval and re-integration, we extract usage slices from a program's code property graph. Comparing our approach against recent neural type inference systems, our model outperforms the current state-of-the-art by 7.85% on the ManyTypes4TypeScript benchmark, achieving 71.27% accuracy overall. Furthermore, we present JoernTI, an integration of our approach into Joern, an open source static analysis tool, and demonstrate that the analysis benefits from the additional type information. As our model allows for fast inference times even on commodity CPUs, making our system available through Joern leads to high accessibility and facilitates security research.

This manuscript portrays optimization as a process. In many practical applications the environment is so complex that it is infeasible to lay out a comprehensive theoretical model and use classical algorithmic theory and mathematical optimization. It is necessary as well as beneficial to take a robust approach, by applying an optimization method that learns as one goes along, learning from experience as more aspects of the problem are observed. This view of optimization as a process has become prominent in varied fields and has led to some spectacular success in modeling and systems that are now part of our daily lives.

Data augmentation has been widely used to improve generalizability of machine learning models. However, comparatively little work studies data augmentation for graphs. This is largely due to the complex, non-Euclidean structure of graphs, which limits possible manipulation operations. Augmentation operations commonly used in vision and language have no analogs for graphs. Our work studies graph data augmentation for graph neural networks (GNNs) in the context of improving semi-supervised node-classification. We discuss practical and theoretical motivations, considerations and strategies for graph data augmentation. Our work shows that neural edge predictors can effectively encode class-homophilic structure to promote intra-class edges and demote inter-class edges in given graph structure, and our main contribution introduces the GAug graph data augmentation framework, which leverages these insights to improve performance in GNN-based node classification via edge prediction. Extensive experiments on multiple benchmarks show that augmentation via GAug improves performance across GNN architectures and datasets.

Benefit from the quick development of deep learning techniques, salient object detection has achieved remarkable progresses recently. However, there still exists following two major challenges that hinder its application in embedded devices, low resolution output and heavy model weight. To this end, this paper presents an accurate yet compact deep network for efficient salient object detection. More specifically, given a coarse saliency prediction in the deepest layer, we first employ residual learning to learn side-output residual features for saliency refinement, which can be achieved with very limited convolutional parameters while keep accuracy. Secondly, we further propose reverse attention to guide such side-output residual learning in a top-down manner. By erasing the current predicted salient regions from side-output features, the network can eventually explore the missing object parts and details which results in high resolution and accuracy. Experiments on six benchmark datasets demonstrate that the proposed approach compares favorably against state-of-the-art methods, and with advantages in terms of simplicity, efficiency (45 FPS) and model size (81 MB).

It is always well believed that modeling relationships between objects would be helpful for representing and eventually describing an image. Nevertheless, there has not been evidence in support of the idea on image description generation. In this paper, we introduce a new design to explore the connections between objects for image captioning under the umbrella of attention-based encoder-decoder framework. Specifically, we present Graph Convolutional Networks plus Long Short-Term Memory (dubbed as GCN-LSTM) architecture that novelly integrates both semantic and spatial object relationships into image encoder. Technically, we build graphs over the detected objects in an image based on their spatial and semantic connections. The representations of each region proposed on objects are then refined by leveraging graph structure through GCN. With the learnt region-level features, our GCN-LSTM capitalizes on LSTM-based captioning framework with attention mechanism for sentence generation. Extensive experiments are conducted on COCO image captioning dataset, and superior results are reported when comparing to state-of-the-art approaches. More remarkably, GCN-LSTM increases CIDEr-D performance from 120.1% to 128.7% on COCO testing set.

Learning from a few examples remains a key challenge in machine learning. Despite recent advances in important domains such as vision and language, the standard supervised deep learning paradigm does not offer a satisfactory solution for learning new concepts rapidly from little data. In this work, we employ ideas from metric learning based on deep neural features and from recent advances that augment neural networks with external memories. Our framework learns a network that maps a small labelled support set and an unlabelled example to its label, obviating the need for fine-tuning to adapt to new class types. We then define one-shot learning problems on vision (using Omniglot, ImageNet) and language tasks. Our algorithm improves one-shot accuracy on ImageNet from 87.6% to 93.2% and from 88.0% to 93.8% on Omniglot compared to competing approaches. We also demonstrate the usefulness of the same model on language modeling by introducing a one-shot task on the Penn Treebank.