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Despite the growing body of work on explainable machine learning in time series classification (TSC), it remains unclear how to evaluate different explainability methods. Resorting to qualitative assessment and user studies to evaluate explainers for TSC is difficult since humans have difficulties understanding the underlying information contained in time series data. Therefore, a systematic review and quantitative comparison of explanation methods to confirm their correctness becomes crucial. While steps to standardized evaluations were taken for tabular, image, and textual data, benchmarking explainability methods on time series is challenging due to a) traditional metrics not being directly applicable, b) implementation and adaption of traditional metrics for time series in the literature vary, and c) varying baseline implementations. This paper proposes XTSC-Bench, a benchmarking tool providing standardized datasets, models, and metrics for evaluating explanation methods on TSC. We analyze 3 perturbation-, 6 gradient- and 2 example-based explanation methods to TSC showing that improvements in the explainers' robustness and reliability are necessary, especially for multivariate data.

In recent years, transfer learning has garnered significant attention in the machine learning community. Its ability to leverage knowledge from related studies to improve generalization performance in a target study has made it highly appealing. This paper focuses on investigating the transfer learning problem within the context of nonparametric regression over a reproducing kernel Hilbert space. The aim is to bridge the gap between practical effectiveness and theoretical guarantees. We specifically consider two scenarios: one where the transferable sources are known and another where they are unknown. For the known transferable source case, we propose a two-step kernel-based estimator by solely using kernel ridge regression. For the unknown case, we develop a novel method based on an efficient aggregation algorithm, which can automatically detect and alleviate the effects of negative sources. This paper provides the statistical properties of the desired estimators and establishes the minimax optimal rate. Through extensive numerical experiments on synthetic data and real examples, we validate our theoretical findings and demonstrate the effectiveness of our proposed method.

With the increasing importance of machine learning, the privacy and security of training data have become critical. Federated learning, which stores data in distributed nodes and shares only model parameters, has gained significant attention for addressing this concern. However, a challenge arises in federated learning due to the Byzantine Attack Problem, where malicious local models can compromise the global model's performance during aggregation. This article proposes the Blockchain-based Byzantine-Robust Federated Learning (BRLF) model that combines federated learning with blockchain technology. This integration enables traceability of malicious models and provides incentives for locally trained clients. Our approach involves selecting the aggregation node based on Pearson's correlation coefficient, and we perform spectral clustering and calculate the average gradient within each cluster, validating its accuracy using local dataset of the aggregation nodes. Experimental results on public datasets demonstrate the superior byzantine robustness of our secure aggregation algorithm compared to other baseline byzantine robust aggregation methods, and proved our proposed model effectiveness in addressing the resource consumption problem.

Large Language Models (LLMs) have demonstrated strong natural language processing and code synthesis capabilities, which has led to their rapid adoption in software engineering applications. However, details about LLM training data are often not made public, which has caused concern as to whether existing bug benchmarks are included. In lieu of the training data for the popular GPT models, we examine the training data of the open-source LLM StarCoder, and find it likely that data from the widely used Defects4J benchmark was included, raising the possibility of its inclusion in GPT training data as well. This makes it difficult to tell how well LLM-based results on Defects4J would generalize, as for any results it would be unclear whether a technique's performance is due to LLM generalization or memorization. To remedy this issue and facilitate continued research on LLM-based SE, we present the GitHub Recent Bugs (GHRB) dataset, which includes 76 real-world Java bugs that were gathered after the OpenAI data cut-off point.

Over the past few years, the rapid development of deep learning technologies for computer vision has greatly promoted the performance of medical image segmentation (MedISeg). However, the recent MedISeg publications usually focus on presentations of the major contributions (e.g., network architectures, training strategies, and loss functions) while unwittingly ignoring some marginal implementation details (also known as "tricks"), leading to a potential problem of the unfair experimental result comparisons. In this paper, we collect a series of MedISeg tricks for different model implementation phases (i.e., pre-training model, data pre-processing, data augmentation, model implementation, model inference, and result post-processing), and experimentally explore the effectiveness of these tricks on the consistent baseline models. Compared to paper-driven surveys that only blandly focus on the advantages and limitation analyses of segmentation models, our work provides a large number of solid experiments and is more technically operable. With the extensive experimental results on both the representative 2D and 3D medical image datasets, we explicitly clarify the effect of these tricks. Moreover, based on the surveyed tricks, we also open-sourced a strong MedISeg repository, where each of its components has the advantage of plug-and-play. We believe that this milestone work not only completes a comprehensive and complementary survey of the state-of-the-art MedISeg approaches, but also offers a practical guide for addressing the future medical image processing challenges including but not limited to small dataset learning, class imbalance learning, multi-modality learning, and domain adaptation. The code has been released at: //github.com/hust-linyi/MedISeg

With the advances of data-driven machine learning research, a wide variety of prediction problems have been tackled. It has become critical to explore how machine learning and specifically deep learning methods can be exploited to analyse healthcare data. A major limitation of existing methods has been the focus on grid-like data; however, the structure of physiological recordings are often irregular and unordered which makes it difficult to conceptualise them as a matrix. As such, graph neural networks have attracted significant attention by exploiting implicit information that resides in a biological system, with interactive nodes connected by edges whose weights can be either temporal associations or anatomical junctions. In this survey, we thoroughly review the different types of graph architectures and their applications in healthcare. We provide an overview of these methods in a systematic manner, organized by their domain of application including functional connectivity, anatomical structure and electrical-based analysis. We also outline the limitations of existing techniques and discuss potential directions for future research.

Self-supervised learning methods are gaining increasing traction in computer vision due to their recent success in reducing the gap with supervised learning. In natural language processing (NLP) self-supervised learning and transformers are already the methods of choice. The recent literature suggests that the transformers are becoming increasingly popular also in computer vision. So far, the vision transformers have been shown to work well when pretrained either using a large scale supervised data or with some kind of co-supervision, e.g. in terms of teacher network. These supervised pretrained vision transformers achieve very good results in downstream tasks with minimal changes. In this work we investigate the merits of self-supervised learning for pretraining image/vision transformers and then using them for downstream classification tasks. We propose Self-supervised vIsion Transformers (SiT) and discuss several self-supervised training mechanisms to obtain a pretext model. The architectural flexibility of SiT allows us to use it as an autoencoder and work with multiple self-supervised tasks seamlessly. We show that a pretrained SiT can be finetuned for a downstream classification task on small scale datasets, consisting of a few thousand images rather than several millions. The proposed approach is evaluated on standard datasets using common protocols. The results demonstrate the strength of the transformers and their suitability for self-supervised learning. We outperformed existing self-supervised learning methods by large margin. We also observed that SiT is good for few shot learning and also showed that it is learning useful representation by simply training a linear classifier on top of the learned features from SiT. Pretraining, finetuning, and evaluation codes will be available under: //github.com/Sara-Ahmed/SiT.

With the rise and development of deep learning, computer vision has been tremendously transformed and reshaped. As an important research area in computer vision, scene text detection and recognition has been inescapably influenced by this wave of revolution, consequentially entering the era of deep learning. In recent years, the community has witnessed substantial advancements in mindset, approach and performance. This survey is aimed at summarizing and analyzing the major changes and significant progresses of scene text detection and recognition in the deep learning era. Through this article, we devote to: (1) introduce new insights and ideas; (2) highlight recent techniques and benchmarks; (3) look ahead into future trends. Specifically, we will emphasize the dramatic differences brought by deep learning and the grand challenges still remained. We expect that this review paper would serve as a reference book for researchers in this field. Related resources are also collected and compiled in our Github repository: //github.com/Jyouhou/SceneTextPapers.

Recently, ensemble has been applied to deep metric learning to yield state-of-the-art results. Deep metric learning aims to learn deep neural networks for feature embeddings, distances of which satisfy given constraint. In deep metric learning, ensemble takes average of distances learned by multiple learners. As one important aspect of ensemble, the learners should be diverse in their feature embeddings. To this end, we propose an attention-based ensemble, which uses multiple attention masks, so that each learner can attend to different parts of the object. We also propose a divergence loss, which encourages diversity among the learners. The proposed method is applied to the standard benchmarks of deep metric learning and experimental results show that it outperforms the state-of-the-art methods by a significant margin on image retrieval tasks.

Deep learning (DL) based semantic segmentation methods have been providing state-of-the-art performance in the last few years. More specifically, these techniques have been successfully applied to medical image classification, segmentation, and detection tasks. One deep learning technique, U-Net, has become one of the most popular for these applications. In this paper, we propose a Recurrent Convolutional Neural Network (RCNN) based on U-Net as well as a Recurrent Residual Convolutional Neural Network (RRCNN) based on U-Net models, which are named RU-Net and R2U-Net respectively. The proposed models utilize the power of U-Net, Residual Network, as well as RCNN. There are several advantages of these proposed architectures for segmentation tasks. First, a residual unit helps when training deep architecture. Second, feature accumulation with recurrent residual convolutional layers ensures better feature representation for segmentation tasks. Third, it allows us to design better U-Net architecture with same number of network parameters with better performance for medical image segmentation. The proposed models are tested on three benchmark datasets such as blood vessel segmentation in retina images, skin cancer segmentation, and lung lesion segmentation. The experimental results show superior performance on segmentation tasks compared to equivalent models including U-Net and residual U-Net (ResU-Net).