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Graph neural networks (GNNs) have gained significant popularity for classification tasks in machine learning, yet their applications to regression problems remain limited. Concurrently, attention mechanisms have emerged as powerful tools in sequential learning tasks. In this paper, we employ GNNs and attention mechanisms to address a classical but challenging nonlinear regression problem: network localization. We propose a novel GNN-based network localization method that achieves exceptional stability and accuracy in the presence of severe non-line-of-sight (NLOS) propagations, while eliminating the need for laborious offline calibration or NLOS identification. Extensive experimental results validate the effectiveness and high accuracy of our GNN-based localization model, particularly in challenging NLOS scenarios. However, the proposed GNN-based model exhibits limited flexibility, and its accuracy is highly sensitive to a specific hyperparameter that determines the graph structure. To address the limitations and extend the applicability of the GNN-based model to real scenarios, we introduce two attentional graph neural networks (AGNNs) that offer enhanced flexibility and the ability to automatically learn the optimal hyperparameter for each node. Experimental results confirm that the AGNN models are able to enhance localization accuracy, providing a promising solution for real-world applications. We also provide some analyses of the improved performance achieved by the AGNN models from the perspectives of dynamic attention and signal denoising characteristics.

We conduct an extensive study on using near-term quantum computers for a task in the domain of computational biology. By constructing quantum models based on parameterised quantum circuits we perform sequence classification on a task relevant to the design of therapeutic proteins, and find competitive performance with classical baselines of similar scale. To study the effect of noise, we run some of the best-performing quantum models with favourable resource requirements on emulators of state-of-the-art noisy quantum processors. We then apply error mitigation methods to improve the signal. We further execute these quantum models on the Quantinuum H1-1 trapped-ion quantum processor and observe very close agreement with noiseless exact simulation. Finally, we perform feature attribution methods and find that the quantum models indeed identify sensible relationships, at least as well as the classical baselines. This work constitutes the first proof-of-concept application of near-term quantum computing to a task critical to the design of therapeutic proteins, opening the route toward larger-scale applications in this and related fields, in line with the hardware development roadmaps of near-term quantum technologies.

Deep neural networks (DNNs) have been widely deployed across diverse domains such as computer vision and natural language processing. However, the impressive accomplishments of DNNs have been realized alongside extensive computational demands, thereby impeding their applicability on resource-constrained devices. To address this challenge, many researchers have been focusing on basic neuron structures, the fundamental building blocks of neural networks, to alleviate the computational and storage cost. In this work, an efficient quadratic neuron architecture distinguished by its enhanced utilization of second-order computational information is introduced. By virtue of their better expressivity, DNNs employing the proposed quadratic neurons can attain similar accuracy with fewer neurons and computational cost. Experimental results have demonstrated that the proposed quadratic neuron structure exhibits superior computational and storage efficiency across various tasks when compared with both linear and non-linear neurons in prior work.

This work addresses the development of a physics-informed neural network (PINN) with a loss term derived from a discretized time-dependent reduced-order system. In this work, first, the governing equations are discretized using a finite difference scheme (whereas, any other discretization technique can be adopted), then projected on a reduced or latent space using the Proper Orthogonal Decomposition (POD)-Galerkin approach and next, the residual arising from discretized reduced order equation is considered as an additional loss penalty term alongside the data-driven loss term using different variants of deep learning method such as Artificial neural network (ANN), Long Short-Term Memory based neural network (LSTM). The LSTM neural network has been proven to be very effective for time-dependent problems in a purely data-driven environment. The current work demonstrates the LSTM network's potential over ANN networks in physics-informed neural networks (PINN) as well. The potential of using discretized governing equations instead of continuous form lies in the flexibility of input to the PINN. Different sizes of data ranging from small, medium to big datasets are used to assess the potential of discretized-physics-informed neural networks when there is very sparse or no data available. The proposed methods are applied to a pitch-plunge airfoil motion governed by rigid-body dynamics and a one-dimensional viscous Burgers' equation. The current work also demonstrates the prediction capability of various discretized-physics-informed neural networks outside the domain where the data is available or governing equation-based residuals are minimized.

Existing neural network verifiers compute a proof that each input is handled correctly under a given perturbation by propagating a symbolic abstraction of reachable values at each layer. This process is repeated from scratch independently for each input (e.g., image) and perturbation (e.g., rotation), leading to an expensive overall proof effort when handling an entire dataset. In this work, we introduce a new method for reducing this verification cost without losing precision based on a key insight that abstractions obtained at intermediate layers for different inputs and perturbations can overlap or contain each other. Leveraging our insight, we introduce the general concept of shared certificates, enabling proof effort reuse across multiple inputs to reduce overall verification costs. We perform an extensive experimental evaluation to demonstrate the effectiveness of shared certificates in reducing the verification cost on a range of datasets and attack specifications on image classifiers including the popular patch and geometric perturbations. We release our implementation at //github.com/eth-sri/proof-sharing.

Recently, graph neural networks (GNNs) have been widely used for document classification. However, most existing methods are based on static word co-occurrence graphs without sentence-level information, which poses three challenges:(1) word ambiguity, (2) word synonymity, and (3) dynamic contextual dependency. To address these challenges, we propose a novel GNN-based sparse structure learning model for inductive document classification. Specifically, a document-level graph is initially generated by a disjoint union of sentence-level word co-occurrence graphs. Our model collects a set of trainable edges connecting disjoint words between sentences and employs structure learning to sparsely select edges with dynamic contextual dependencies. Graphs with sparse structures can jointly exploit local and global contextual information in documents through GNNs. For inductive learning, the refined document graph is further fed into a general readout function for graph-level classification and optimization in an end-to-end manner. Extensive experiments on several real-world datasets demonstrate that the proposed model outperforms most state-of-the-art results, and reveal the necessity to learn sparse structures for each document.

Graph neural networks (GNNs) is widely used to learn a powerful representation of graph-structured data. Recent work demonstrates that transferring knowledge from self-supervised tasks to downstream tasks could further improve graph representation. However, there is an inherent gap between self-supervised tasks and downstream tasks in terms of optimization objective and training data. Conventional pre-training methods may be not effective enough on knowledge transfer since they do not make any adaptation for downstream tasks. To solve such problems, we propose a new transfer learning paradigm on GNNs which could effectively leverage self-supervised tasks as auxiliary tasks to help the target task. Our methods would adaptively select and combine different auxiliary tasks with the target task in the fine-tuning stage. We design an adaptive auxiliary loss weighting model to learn the weights of auxiliary tasks by quantifying the consistency between auxiliary tasks and the target task. In addition, we learn the weighting model through meta-learning. Our methods can be applied to various transfer learning approaches, it performs well not only in multi-task learning but also in pre-training and fine-tuning. Comprehensive experiments on multiple downstream tasks demonstrate that the proposed methods can effectively combine auxiliary tasks with the target task and significantly improve the performance compared to state-of-the-art methods.

Recent contrastive representation learning methods rely on estimating mutual information (MI) between multiple views of an underlying context. E.g., we can derive multiple views of a given image by applying data augmentation, or we can split a sequence into views comprising the past and future of some step in the sequence. Contrastive lower bounds on MI are easy to optimize, but have a strong underestimation bias when estimating large amounts of MI. We propose decomposing the full MI estimation problem into a sum of smaller estimation problems by splitting one of the views into progressively more informed subviews and by applying the chain rule on MI between the decomposed views. This expression contains a sum of unconditional and conditional MI terms, each measuring modest chunks of the total MI, which facilitates approximation via contrastive bounds. To maximize the sum, we formulate a contrastive lower bound on the conditional MI which can be approximated efficiently. We refer to our general approach as Decomposed Estimation of Mutual Information (DEMI). We show that DEMI can capture a larger amount of MI than standard non-decomposed contrastive bounds in a synthetic setting, and learns better representations in a vision domain and for dialogue generation.

Graph neural networks (GNNs) are a popular class of machine learning models whose major advantage is their ability to incorporate a sparse and discrete dependency structure between data points. Unfortunately, GNNs can only be used when such a graph-structure is available. In practice, however, real-world graphs are often noisy and incomplete or might not be available at all. With this work, we propose to jointly learn the graph structure and the parameters of graph convolutional networks (GCNs) by approximately solving a bilevel program that learns a discrete probability distribution on the edges of the graph. This allows one to apply GCNs not only in scenarios where the given graph is incomplete or corrupted but also in those where a graph is not available. We conduct a series of experiments that analyze the behavior of the proposed method and demonstrate that it outperforms related methods by a significant margin.

Deep neural networks (DNNs) have been found to be vulnerable to adversarial examples resulting from adding small-magnitude perturbations to inputs. Such adversarial examples can mislead DNNs to produce adversary-selected results. Different attack strategies have been proposed to generate adversarial examples, but how to produce them with high perceptual quality and more efficiently requires more research efforts. In this paper, we propose AdvGAN to generate adversarial examples with generative adversarial networks (GANs), which can learn and approximate the distribution of original instances. For AdvGAN, once the generator is trained, it can generate adversarial perturbations efficiently for any instance, so as to potentially accelerate adversarial training as defenses. We apply AdvGAN in both semi-whitebox and black-box attack settings. In semi-whitebox attacks, there is no need to access the original target model after the generator is trained, in contrast to traditional white-box attacks. In black-box attacks, we dynamically train a distilled model for the black-box model and optimize the generator accordingly. Adversarial examples generated by AdvGAN on different target models have high attack success rate under state-of-the-art defenses compared to other attacks. Our attack has placed the first with 92.76% accuracy on a public MNIST black-box attack challenge.