Mantaci et al. [TCS 2007] defined the eBWT to extend the definition of the BWT to a collection of strings, however, since this introduction, it has been used more generally to describe any BWT of a collection of strings and the fundamental property of the original definition (i.e., the independence from the input order) is frequently disregarded. In this paper, we propose a simple linear-time algorithm for the construction of the original eBWT, which does not require the preprocessing of Bannai et al. [CPM 2021]. As a byproduct, we obtain the first linear-time algorithm for computing the BWT of a single string that uses neither an end-of-string symbol nor Lyndon rotations. We combine our new eBWT construction with a variation of prefix-free parsing to allow for scalable construction of the eBWT. We evaluate our algorithm (pfpebwt) on sets of human chromosomes 19, Salmonella, and SARS-CoV2 genomes, and demonstrate that it is the fastest method for all collections, with a maximum speedup of 7.6x on the second best method. The peak memory is at most 2x larger than the second best method. Comparing with methods that are also, as our algorithm, able to report suffix array samples, we obtain a 57.1x improvement in peak memory. The source code is publicly available at //github.com/davidecenzato/PFP-eBWT.
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We study edit distance computation with preprocessing: the preprocessing algorithm acts on each string separately, and then the query algorithm takes as input the two preprocessed strings. This model is inspired by scenarios where we would like to compute edit distance between many pairs in the same pool of strings. Our results include: Permutation-LCS: If the LCS between two permutations has length $n-k$, we can compute it \textit{ exactly} with $O(n \log(n))$ preprocessing and $O(k \log(n))$ query time. Small edit distance: For general strings, if their edit distance is at most $k$, we can compute it \textit{ exactly} with $O(n\log(n))$ preprocessing and $O(k^2 \log(n))$ query time. Approximate edit distance: For the most general input, we can approximate the edit distance to within factor $(7+o(1))$ with preprocessing time $\tilde{O}(n^2)$ and query time $\tilde{O}(n^{1.5+o(1)})$. All of these results significantly improve over the state of the art in edit distance computation without preprocessing. Interestingly, by combining ideas from our algorithms with preprocessing, we provide new improved results for approximating edit distance without preprocessing in subquadratic time.
We present an improved algorithm for computing the $4$-edge-connected components of an undirected graph in linear time. The new algorithm uses only elementary data structures, and it is simple to describe and to implement in the pointer machine model of computation.
Deployment of Deep Neural Networks for Object Detection on Edge AI Devices with Runtime Optimization
Deep neural networks have proven increasingly important for automotive scene understanding with new algorithms offering constant improvements of the detection performance. However, there is little emphasis on experiences and needs for deployment in embedded environments. We therefore perform a case study of the deployment of two representative object detection networks on an edge AI platform. In particular, we consider RetinaNet for image-based 2D object detection and PointPillars for LiDAR-based 3D object detection. We describe the modifications necessary to convert the algorithms from a PyTorch training environment to the deployment environment taking into account the available tools. We evaluate the runtime of the deployed DNN using two different libraries, TensorRT and TorchScript. In our experiments, we observe slight advantages of TensorRT for convolutional layers and TorchScript for fully connected layers. We also study the trade-off between runtime and performance, when selecting an optimized setup for deployment, and observe that quantization significantly reduces the runtime while having only little impact on the detection performance.
Principal component analysis (PCA) has achieved great success in unsupervised learning by identifying covariance correlations among features. If the data collection fails to capture the covariance information, PCA will not be able to discover meaningful modes. In particular, PCA will fail the spatial Gaussian Process (GP) model in the undersampling regime, i.e. the averaged distance of neighboring anchor points (spatial features) is greater than the correlation length of GP. Counterintuitively, by drawing the connection between PCA and Schr\"odinger equation, we can not only attack the undersampling challenge but also compute in an efficient and decoupled way with the proposed algorithm called Schr\"odinger PCA. Our algorithm only requires variances of features and estimated correlation length as input, constructs the corresponding Schr\"odinger equation, and solves it to obtain the energy eigenstates, which coincide with principal components. We will also establish the connection of our algorithm to the model reduction techniques in the partial differential equation (PDE) community, where the steady-state Schr\"odinger operator is identified as a second-order approximation to the covariance function. Numerical experiments are implemented to testify the validity and efficiency of the proposed algorithm, showing its potential for unsupervised learning tasks on general graphs and manifolds.
Neuromorphic computing mimics the neural activity of the brain through emulating spiking neural networks. In numerous machine learning tasks, neuromorphic chips are expected to provide superior solutions in terms of cost and power efficiency. Here, we explore the application of Loihi, a neuromorphic computing chip developed by Intel, for the computer vision task of image retrieval. We evaluated the functionalities and the performance metrics that are critical in content-based visual search and recommender systems using deep-learning embeddings. Our results show that the neuromorphic solution is about 2.5 times more energy-efficient compared with an ARM Cortex-A72 CPU and 12.5 times more energy-efficient compared with NVIDIA T4 GPU for inference by a lightweight convolutional neural network without batching while maintaining the same level of matching accuracy. The study validates the potential of neuromorphic computing in low-power image retrieval, as a complementary paradigm to the existing von Neumann architectures.
Realizing today's cloud-level artificial intelligence functionalities directly on devices distributed at the edge of the internet calls for edge hardware capable of processing multiple modalities of sensory data (e.g. video, audio) at unprecedented energy-efficiency. AI hardware architectures today cannot meet the demand due to a fundamental "memory wall": data movement between separate compute and memory units consumes large energy and incurs long latency. Resistive random-access memory (RRAM) based compute-in-memory (CIM) architectures promise to bring orders of magnitude energy-efficiency improvement by performing computation directly within memory. However, conventional approaches to CIM hardware design limit its functional flexibility necessary for processing diverse AI workloads, and must overcome hardware imperfections that degrade inference accuracy. Such trade-offs between efficiency, versatility and accuracy cannot be addressed by isolated improvements on any single level of the design. By co-optimizing across all hierarchies of the design from algorithms and architecture to circuits and devices, we present NeuRRAM - the first multimodal edge AI chip using RRAM CIM to simultaneously deliver a high degree of versatility for diverse model architectures, record energy-efficiency $5\times$ - $8\times$ better than prior art across various computational bit-precisions, and inference accuracy comparable to software models with 4-bit weights on all measured standard AI benchmarks including accuracy of 99.0% on MNIST and 85.7% on CIFAR-10 image classification, 84.7% accuracy on Google speech command recognition, and a 70% reduction in image reconstruction error on a Bayesian image recovery task. This work paves a way towards building highly efficient and reconfigurable edge AI hardware platforms for the more demanding and heterogeneous AI applications of the future.
In NMT, how far can we get without attention and without separate encoding and decoding? To answer that question, we introduce a recurrent neural translation model that does not use attention and does not have a separate encoder and decoder. Our eager translation model is low-latency, writing target tokens as soon as it reads the first source token, and uses constant memory during decoding. It performs on par with the standard attention-based model of Bahdanau et al. (2014), and better on long sentences.
Deep learning has made remarkable achievement in many fields. However, learning the parameters of neural networks usually demands a large amount of labeled data. The algorithms of deep learning, therefore, encounter difficulties when applied to supervised learning where only little data are available. This specific task is called few-shot learning. To address it, we propose a novel algorithm for few-shot learning using discrete geometry, in the sense that the samples in a class are modeled as a reduced simplex. The volume of the simplex is used for the measurement of class scatter. During testing, combined with the test sample and the points in the class, a new simplex is formed. Then the similarity between the test sample and the class can be quantized with the ratio of volumes of the new simplex to the original class simplex. Moreover, we present an approach to constructing simplices using local regions of feature maps yielded by convolutional neural networks. Experiments on Omniglot and miniImageNet verify the effectiveness of our simplex algorithm on few-shot learning.
Faster RCNN has achieved great success for generic object detection including PASCAL object detection and MS COCO object detection. In this report, we propose a detailed designed Faster RCNN method named FDNet1.0 for face detection. Several techniques were employed including multi-scale training, multi-scale testing, light-designed RCNN, some tricks for inference and a vote-based ensemble method. Our method achieves two 1th places and one 2nd place in three tasks over WIDER FACE validation dataset (easy set, medium set, hard set).
We propose an attentive local feature descriptor suitable for large-scale image retrieval, referred to as DELF (DEep Local Feature). The new feature is based on convolutional neural networks, which are trained only with image-level annotations on a landmark image dataset. To identify semantically useful local features for image retrieval, we also propose an attention mechanism for keypoint selection, which shares most network layers with the descriptor. This framework can be used for image retrieval as a drop-in replacement for other keypoint detectors and descriptors, enabling more accurate feature matching and geometric verification. Our system produces reliable confidence scores to reject false positives---in particular, it is robust against queries that have no correct match in the database. To evaluate the proposed descriptor, we introduce a new large-scale dataset, referred to as Google-Landmarks dataset, which involves challenges in both database and query such as background clutter, partial occlusion, multiple landmarks, objects in variable scales, etc. We show that DELF outperforms the state-of-the-art global and local descriptors in the large-scale setting by significant margins. Code and dataset can be found at the project webpage: //github.com/tensorflow/models/tree/master/research/delf .
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