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We study the performance of shape-constrained methods for evaluating immune response profiles from early-phase vaccine trials. The motivating problem for this work involves quantifying and comparing the IgG binding immune responses to the first and second variable loops (V1V2 region) arising in HVTN 097 and HVTN 100 HIV vaccine trials. We consider unimodal and log-concave shape-constrained methods to compare the immune profiles of the two vaccines, which is reasonable because the data support that the underlying densities of the immune responses could have these shapes. To this end, we develop novel shape-constrained tests of stochastic dominance and shape-constrained plug-in estimators of the Hellinger distance between two densities. Our techniques are either tuning parameter free, or rely on only one tuning parameter, but their performance is either better (the tests of stochastic dominance) or comparable with the nonparametric methods (the estimators of Hellinger distance). The minimal dependence on tuning parameters is especially desirable in clinical contexts where analyses must be prespecified and reproducible. Our methods are supported by theoretical results and simulation studies.

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Recently neural network based approaches to knowledge-intensive NLP tasks, such as question answering, started to rely heavily on the combination of neural retrievers and readers. Retrieval is typically performed over a large textual knowledge base (KB) which requires significant memory and compute resources, especially when scaled up. On HotpotQA we systematically investigate reducing the size of the KB index by means of dimensionality (sparse random projections, PCA, autoencoders) and numerical precision reduction. Our results show that PCA is an easy solution that requires very little data and is only slightly worse than autoencoders, which are less stable. All methods are sensitive to pre- and post-processing and data should always be centered and normalized both before and after dimension reduction. Finally, we show that it is possible to combine PCA with using 1bit per dimension. Overall we achieve (1) 100$\times$ compression with 75%, and (2) 24$\times$ compression with 92% original retrieval performance.

We investigate the feature compression of high-dimensional ridge regression using the optimal subsampling technique. Specifically, based on the basic framework of random sampling algorithm on feature for ridge regression and the A-optimal design criterion, we first obtain a set of optimal subsampling probabilities. Considering that the obtained probabilities are uneconomical, we then propose the nearly optimal ones. With these probabilities, a two step iterative algorithm is established which has lower computational cost and higher accuracy. We provide theoretical analysis and numerical experiments to support the proposed methods. Numerical results demonstrate the decent performance of our methods.

In this paper, we introduce reduced-bias estimators for the estimation of the tail index of a Pareto-type distribution. This is achieved through the use of a regularised weighted least squares with an exponential regression model for log-spacings of top order statistics. The asymptotic properties of the proposed estimators are investigated analytically and found to be asymptotically unbiased, consistent and normally distributed. Also, the finite sample behaviour of the estimators are studied through a simulations theory. The proposed estimators were found to yield low bias and MSE. In addition, the proposed estimators are illustrated through the estimation of the tail index of the underlying distribution of claims from the insurance industry.

We propose a novel concise function representation for graphical models, a central theoretical framework that provides the basis for many reasoning tasks. We then show how we exploit our concise representation based on deterministic finite state automata within Bucket Elimination (BE), a general approach based on the concept of variable elimination that can be used to solve many inference and optimisation tasks, such as most probable explanation and constrained optimisation. We denote our version of BE as FABE. By using our concise representation within FABE, we dramatically improve the performance of BE in terms of runtime and memory requirements. Results achieved by comparing FABE with state of the art approaches for most probable explanation (i.e., recursive best-first and structured message passing) and constrained optimisation (i.e., CPLEX, GUROBI, and toulbar2) following an established methodology confirm the efficacy of our concise function representation, showing runtime improvements of up to 5 orders of magnitude in our tests.

In this paper, a new communication-efficient federated learning (FL) framework is proposed, inspired by vector quantized compressed sensing. The basic strategy of the proposed framework is to compress the local model update at each device by applying dimensionality reduction followed by vector quantization. Subsequently, the global model update is reconstructed at a parameter server (PS) by applying a sparse signal recovery algorithm to the aggregation of the compressed local model updates. By harnessing the benefits of both dimensionality reduction and vector quantization, the proposed framework effectively reduces the communication overhead of local update transmissions. Both the design of the vector quantizer and the key parameters for the compression are optimized so as to minimize the reconstruction error of the global model update under the constraint of wireless link capacity. By considering the reconstruction error, the convergence rate of the proposed framework is also analyzed for a smooth loss function. Simulation results on the MNIST and CIFAR-10 datasets demonstrate that the proposed framework provides more than a 2.5% increase in classification accuracy compared to state-of-art FL frameworks when the communication overhead of the local model update transmission is less than 0.1 bit per local model entry.

Bayesian model selection provides a powerful framework for objectively comparing models directly from observed data, without reference to ground truth data. However, Bayesian model selection requires the computation of the marginal likelihood (model evidence), which is computationally challenging, prohibiting its use in many high-dimensional Bayesian inverse problems. With Bayesian imaging applications in mind, in this work we present the proximal nested sampling methodology to objectively compare alternative Bayesian imaging models for applications that use images to inform decisions under uncertainty. The methodology is based on nested sampling, a Monte Carlo approach specialised for model comparison, and exploits proximal Markov chain Monte Carlo techniques to scale efficiently to large problems and to tackle models that are log-concave and not necessarily smooth (e.g., involving l_1 or total-variation priors). The proposed approach can be applied computationally to problems of dimension O(10^6) and beyond, making it suitable for high-dimensional inverse imaging problems. It is validated on large Gaussian models, for which the likelihood is available analytically, and subsequently illustrated on a range of imaging problems where it is used to analyse different choices of dictionary and measurement model.

Convection-diffusion-reaction equations model the conservation of scalar quantities. From the analytic point of view, solution of these equations satisfy under certain conditions maximum principles, which represent physical bounds of the solution. That the same bounds are respected by numerical approximations of the solution is often of utmost importance in practice. The mathematical formulation of this property, which contributes to the physical consistency of a method, is called Discrete Maximum Principle (DMP). In many applications, convection dominates diffusion by several orders of magnitude. It is well known that standard discretizations typically do not satisfy the DMP in this convection-dominated regime. In fact, in this case, it turns out to be a challenging problem to construct discretizations that, on the one hand, respect the DMP and, on the other hand, compute accurate solutions. This paper presents a survey on finite element methods, with a main focus on the convection-dominated regime, that satisfy a local or a global DMP. The concepts of the underlying numerical analysis are discussed. The survey reveals that for the steady-state problem there are only a few discretizations, all of them nonlinear, that at the same time satisfy the DMP and compute reasonably accurate solutions, e.g., algebraically stabilized schemes. Moreover, most of these discretizations have been developed in recent years, showing the enormous progress that has been achieved lately. Methods based on algebraic stabilization, nonlinear and linear ones, are currently as well the only finite element methods that combine the satisfaction of the global DMP and accurate numerical results for the evolutionary equations in the convection-dominated situation.

The inverse probability (IPW) and doubly robust (DR) estimators are often used to estimate the average causal effect (ATE), but are vulnerable to outliers. The IPW/DR median can be used for outlier-resistant estimation of the ATE, but the outlier resistance of the median is limited and it is not resistant enough for heavy contamination. We propose extensions of the IPW/DR estimators with density power weighting, which can eliminate the influence of outliers almost completely. The outlier resistance of the proposed estimators is evaluated through the unbiasedness of the estimating equations. Unlike the median-based methods, our estimators are resistant to outliers even under heavy contamination. Interestingly, the naive extension of the DR estimator requires bias correction to keep the double robustness even under the most tractable form of contamination. In addition, the proposed estimators are found to be highly resistant to outliers in more difficult settings where the contamination ratio depends on the covariates. The outlier resistance of our estimators from the viewpoint of the influence function is also favorable. Our theoretical results are verified via Monte Carlo simulations and real data analysis. The proposed methods were found to have more outlier resistance than the median-based methods and estimated the potential mean with a smaller error than the median-based methods.

Recent advances in computer vision has led to a growth of interest in deploying visual analytics model on mobile devices. However, most mobile devices have limited computing power, which prohibits them from running large scale visual analytics neural networks. An emerging approach to solve this problem is to offload the computation of these neural networks to computing resources at an edge server. Efficient computation offloading requires optimizing the trade-off between multiple objectives including compressed data rate, analytics performance, and computation speed. In this work, we consider a "split computation" system to offload a part of the computation of the YOLO object detection model. We propose a learnable feature compression approach to compress the intermediate YOLO features with light-weight computation. We train the feature compression and decompression module together with the YOLO model to optimize the object detection accuracy under a rate constraint. Compared to baseline methods that apply either standard image compression or learned image compression at the mobile and perform image decompression and YOLO at the edge, the proposed system achieves higher detection accuracy at the low to medium rate range. Furthermore, the proposed system requires substantially lower computation time on the mobile device with CPU only.

We present a pipelined multiplier with reduced activities and minimized interconnect based on online digit-serial arithmetic. The working precision has been truncated such that $p<n$ bits are used to compute $n$ bits product, resulting in significant savings in area and power. The digit slices follow variable precision according to input, increasing upto $p$ and then decreases according to the error profile. Pipelining has been done to achieve high throughput and low latency which is desirable for compute intensive inner products. Synthesis results of the proposed designs have been presented and compared with the non-pipelined online multiplier, pipelined online multiplier with full working precision and conventional serial-parallel and array multipliers. For $8, 16, 24$ and $32$ bit precision, the proposed low power pipelined design show upto $38\%$ and $44\%$ reduction in power and area respectively compared to the pipelined online multiplier without working precision truncation.

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