Medical image analysis using deep learning is often challenged by limited labeled data and high annotation costs. Fine-tuning the entire network in label-limited scenarios can lead to overfitting and suboptimal performance. Recently, prompt tuning has emerged as a more promising technique that introduces a few additional tunable parameters as prompts to a task-agnostic pre-trained model, and updates only these parameters using supervision from limited labeled data while keeping the pre-trained model unchanged. However, previous work has overlooked the importance of selective labeling in downstream tasks, which aims to select the most valuable downstream samples for annotation to achieve the best performance with minimum annotation cost. To address this, we propose a framework that combines selective labeling with prompt tuning (SLPT) to boost performance in limited labels. Specifically, we introduce a feature-aware prompt updater to guide prompt tuning and a TandEm Selective LAbeling (TESLA) strategy. TESLA includes unsupervised diversity selection and supervised selection using prompt-based uncertainty. In addition, we propose a diversified visual prompt tuning strategy to provide multi-prompt-based discrepant predictions for TESLA. We evaluate our method on liver tumor segmentation and achieve state-of-the-art performance, outperforming traditional fine-tuning with only 6% of tunable parameters, also achieving 94% of full-data performance by labeling only 5% of the data.
相關內容
Image retrieval methods based on CNN descriptors rely on metric learning from a large number of diverse examples of positive and negative image pairs. Domains, such as night-time images, with limited availability and variability of training data suffer from poor retrieval performance even with methods performing well on standard benchmarks. We propose to train a GAN-based synthetic-image generator, translating available day-time image examples into night images. Such a generator is used in metric learning as a form of augmentation, supplying training data to the scarce domain. Various types of generators are evaluated and analyzed. We contribute with a novel light-weight GAN architecture that enforces the consistency between the original and translated image through edge consistency. The proposed architecture also allows a simultaneous training of an edge detector that operates on both night and day images. To further increase the variability in the training examples and to maximize the generalization of the trained model, we propose a novel method of diverse anchor mining. The proposed method improves over the state-of-the-art results on a standard Tokyo 24/7 day-night retrieval benchmark while preserving the performance on Oxford and Paris datasets. This is achieved without the need of training image pairs of matching day and night images. The source code is available at //github.com/mohwald/gandtr .
Machine learning (ML) based systems have been suffering a lack of interpretability. To address this problem, counterfactual explanations (CEs) have been proposed. CEs are unique as they provide workable suggestions to users, in addition to explaining why a certain outcome was predicted. However, the application of CEs has been hindered by two main challenges, namely general user preferences and variable ML systems. User preferences, in particular, tend to be general rather than specific feature values. Additionally, CEs need to be customized to suit the variability of ML models, while also maintaining robustness even when these validation models change. To overcome these challenges, we propose several possible general user preferences that have been validated by user research and map them to the properties of CEs. We also introduce a new method called \uline{T}ree-based \uline{C}onditions \uline{O}ptional \uline{L}inks (T-COL), which has two optional structures and several groups of conditions for generating CEs that can be adapted to general user preferences. Meanwhile, a group of conditions lead T-COL to generate more robust CEs that have higher validity when the ML model is replaced. We compared the properties of CEs generated by T-COL experimentally under different user preferences and demonstrated that T-COL is better suited for accommodating user preferences and variable ML systems compared to baseline methods including Large Language Models.
We propose a method for adapting neural networks to distribution shifts at test-time. In contrast to training-time robustness mechanisms that attempt to anticipate and counter the shift, we create a closed-loop system and make use of a test-time feedback signal to adapt a network on the fly. We show that this loop can be effectively implemented using a learning-based function, which realizes an amortized optimizer for the network. This leads to an adaptation method, named Rapid Network Adaptation (RNA), that is notably more flexible and orders of magnitude faster than the baselines. Through a broad set of experiments using various adaptation signals and target tasks, we study the efficiency and flexibility of this method. We perform the evaluations using various datasets (Taskonomy, Replica, ScanNet, Hypersim, COCO, ImageNet), tasks (depth, optical flow, semantic segmentation, classification), and distribution shifts (Cross-datasets, 2D and 3D Common Corruptions) with promising results. We end with a discussion on general formulations for handling distribution shifts and our observations from comparing with similar approaches from other domains.
Vision Transformers (ViTs) have emerged as state-of-the-art models for various vision tasks recently. However, their heavy computation costs remain daunting for resource-limited devices. Consequently, researchers have dedicated themselves to compressing redundant information in ViTs for acceleration. However, they generally sparsely drop redundant image tokens by token pruning or brutally remove channels by channel pruning, leading to a sub-optimal balance between model performance and inference speed. They are also disadvantageous in transferring compressed models to downstream vision tasks that require the spatial structure of images, such as semantic segmentation. To tackle these issues, we propose a joint compression method for ViTs that offers both high accuracy and fast inference speed, while also maintaining favorable transferability to downstream tasks (CAIT). Specifically, we introduce an asymmetric token merging (ATME) strategy to effectively integrate neighboring tokens. It can successfully compress redundant token information while preserving the spatial structure of images. We further employ a consistent dynamic channel pruning (CDCP) strategy to dynamically prune unimportant channels in ViTs. Thanks to CDCP, insignificant channels in multi-head self-attention modules of ViTs can be pruned uniformly, greatly enhancing the model compression. Extensive experiments on benchmark datasets demonstrate that our proposed method can achieve state-of-the-art performance across various ViTs. For example, our pruned DeiT-Tiny and DeiT-Small achieve speedups of 1.7$\times$ and 1.9$\times$, respectively, without accuracy drops on ImageNet. On the ADE20k segmentation dataset, our method can enjoy up to 1.31$\times$ speedups with comparable mIoU. Our code will be publicly available.
Mobile video applications today have attracted significant attention. Deep learning model (e.g. deep neural network, DNN) compression is widely used to enable on-device inference for facilitating robust and private mobile video applications. The compressed DNN, however, is vulnerable to the agnostic data drift of the live video captured from the dynamically changing mobile scenarios. To combat the data drift, mobile ends rely on edge servers to continuously evolve and re-compress the DNN with freshly collected data. We design a framework, AdaEvo, that efficiently supports the resource-limited edge server handling mobile DNN evolution tasks from multiple mobile ends. The key goal of AdaEvo is to maximize the average quality of experience (QoE), e.g. the proportion of high-quality DNN service time to the entire life cycle, for all mobile ends. Specifically, it estimates the DNN accuracy drops at the mobile end without labels and performs a dedicated video frame sampling strategy to control the size of retraining data. In addition, it balances the limited computing and memory resources on the edge server and the competition between asynchronous tasks initiated by different mobile users. With an extensive evaluation of real-world videos from mobile scenarios and across four diverse mobile tasks, experimental results show that AdaEvo enables up to 34% accuracy improvement and 32% average QoE improvement.
Effectively addressing missing values in data imputation is pivotal, particularly for intricate datasets. This study delves into the full information maximum likelihood (FIML) optimized self-attention (FOSA) framework, an innovative approach that amalgamates the strengths of FIML estimation with the capabilities of self-attention neural networks. Our methodology begins with an initial estimation of missing values via FIML, which is subsequently refined by leveraging the self-attention mechanism. Our comprehensive experiments on both simulated and real-world datasets underscore the pronounced advantages of FOSA over traditional FIML techniques, including encapsulating facets of accuracy, computational efficiency, and adaptability to diverse data structures. Intriguingly, even in cases where the structural equation model can be misspecified, leading to sub-optimal FIML estimates, the robust architecture of the FOSA self-attention component adeptly rectifies and optimizes the imputation outcomes. Our empirical tests reveal that FOSA consistently delivers commendable predictions even for approximately 40% random missingness, highlighting its robustness and potential for wide-scale applications in data imputation.
Deep learning-based algorithms have seen a massive popularity in different areas of remote sensing image analysis over the past decade. Recently, transformers-based architectures, originally introduced in natural language processing, have pervaded computer vision field where the self-attention mechanism has been utilized as a replacement to the popular convolution operator for capturing long-range dependencies. Inspired by recent advances in computer vision, remote sensing community has also witnessed an increased exploration of vision transformers for a diverse set of tasks. Although a number of surveys have focused on transformers in computer vision in general, to the best of our knowledge we are the first to present a systematic review of recent advances based on transformers in remote sensing. Our survey covers more than 60 recent transformers-based methods for different remote sensing problems in sub-areas of remote sensing: very high-resolution (VHR), hyperspectral (HSI) and synthetic aperture radar (SAR) imagery. We conclude the survey by discussing different challenges and open issues of transformers in remote sensing. Additionally, we intend to frequently update and maintain the latest transformers in remote sensing papers with their respective code at: //github.com/VIROBO-15/Transformer-in-Remote-Sensing
The remarkable success of deep learning has prompted interest in its application to medical diagnosis. Even tough state-of-the-art deep learning models have achieved human-level accuracy on the classification of different types of medical data, these models are hardly adopted in clinical workflows, mainly due to their lack of interpretability. The black-box-ness of deep learning models has raised the need for devising strategies to explain the decision process of these models, leading to the creation of the topic of eXplainable Artificial Intelligence (XAI). In this context, we provide a thorough survey of XAI applied to medical diagnosis, including visual, textual, and example-based explanation methods. Moreover, this work reviews the existing medical imaging datasets and the existing metrics for evaluating the quality of the explanations . Complementary to most existing surveys, we include a performance comparison among a set of report generation-based methods. Finally, the major challenges in applying XAI to medical imaging are also discussed.
Semi-supervised learning on class-imbalanced data, although a realistic problem, has been under studied. While existing semi-supervised learning (SSL) methods are known to perform poorly on minority classes, we find that they still generate high precision pseudo-labels on minority classes. By exploiting this property, in this work, we propose Class-Rebalancing Self-Training (CReST), a simple yet effective framework to improve existing SSL methods on class-imbalanced data. CReST iteratively retrains a baseline SSL model with a labeled set expanded by adding pseudo-labeled samples from an unlabeled set, where pseudo-labeled samples from minority classes are selected more frequently according to an estimated class distribution. We also propose a progressive distribution alignment to adaptively adjust the rebalancing strength dubbed CReST+. We show that CReST and CReST+ improve state-of-the-art SSL algorithms on various class-imbalanced datasets and consistently outperform other popular rebalancing methods.
Convolutional Neural Networks (CNNs) have gained significant traction in the field of machine learning, particularly due to their high accuracy in visual recognition. Recent works have pushed the performance of GPU implementations of CNNs to significantly improve their classification and training times. With these improvements, many frameworks have become available for implementing CNNs on both CPUs and GPUs, with no support for FPGA implementations. In this work we present a modified version of the popular CNN framework Caffe, with FPGA support. This allows for classification using CNN models and specialized FPGA implementations with the flexibility of reprogramming the device when necessary, seamless memory transactions between host and device, simple-to-use test benches, and the ability to create pipelined layer implementations. To validate the framework, we use the Xilinx SDAccel environment to implement an FPGA-based Winograd convolution engine and show that the FPGA layer can be used alongside other layers running on a host processor to run several popular CNNs (AlexNet, GoogleNet, VGG A, Overfeat). The results show that our framework achieves 50 GFLOPS across 3x3 convolutions in the benchmarks. This is achieved within a practical framework, which will aid in future development of FPGA-based CNNs.
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