Persistent homology has become an important tool for extracting geometric and topological features from data, whose multi-scale features are summarized in a persistence diagram. From a statistical perspective, however, persistence diagrams are very sensitive to perturbations in the input space. In this work, we develop a framework for constructing robust persistence diagrams from superlevel filtrations of robust density estimators constructed using reproducing kernels. Using an analogue of the influence function on the space of persistence diagrams, we establish the proposed framework to be less sensitive to outliers. The robust persistence diagrams are shown to be consistent estimators in bottleneck distance, with the convergence rate controlled by the smoothness of the kernel. This, in turn, allows us to construct uniform confidence bands in the space of persistence diagrams. Finally, we demonstrate the superiority of the proposed approach on benchmark datasets.
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Establishing a correspondence between two non-rigidly deforming shapes is one of the most fundamental problems in visual computing. Existing methods often show weak resilience when presented with challenges innate to real-world data such as noise, outliers, self-occlusion etc. On the other hand, auto-decoders have demonstrated strong expressive power in learning geometrically meaningful latent embeddings. However, their use in \emph{shape analysis} has been limited. In this paper, we introduce an approach based on an auto-decoder framework, that learns a continuous shape-wise deformation field over a fixed template. By supervising the deformation field for points on-surface and regularising for points off-surface through a novel \emph{Signed Distance Regularisation} (SDR), we learn an alignment between the template and shape \emph{volumes}. Trained on clean water-tight meshes, \emph{without} any data-augmentation, we demonstrate compelling performance on compromised data and real-world scans.
Heterogeneity is a dominant factor in the behaviour of many biological processes. Despite this, it is common for mathematical and statistical analyses to ignore biological heterogeneity as a source of variability in experimental data. Therefore, methods for exploring the identifiability of models that explicitly incorporate heterogeneity through variability in model parameters are relatively underdeveloped. We develop a new likelihood-based framework, based on moment matching, for inference and identifiability analysis of differential equation models that capture biological heterogeneity through parameters that vary according to probability distributions. As our novel method is based on an approximate likelihood function, it is highly flexible; we demonstrate identifiability analysis using both a frequentist approach based on profile likelihood, and a Bayesian approach based on Markov-chain Monte Carlo. Through three case studies, we demonstrate our method by providing a didactic guide to inference and identifiability analysis of hyperparameters that relate to the statistical moments of model parameters from independent observed data. Our approach has a computational cost comparable to analysis of models that neglect heterogeneity, a significant improvement over many existing alternatives. We demonstrate how analysis of random parameter models can aid better understanding of the sources of heterogeneity from biological data.
Generative Adversarial Networks (GANs) have achieved a great success in unsupervised learning. Despite its remarkable empirical performance, there are limited theoretical studies on the statistical properties of GANs. This paper provides approximation and statistical guarantees of GANs for the estimation of data distributions that have densities in a H\"{o}lder space. Our main result shows that, if the generator and discriminator network architectures are properly chosen, GANs are consistent estimators of data distributions under strong discrepancy metrics, such as the Wasserstein-1 distance. Furthermore, when the data distribution exhibits low-dimensional structures, we show that GANs are capable of capturing the unknown low-dimensional structures in data and enjoy a fast statistical convergence, which is free of curse of the ambient dimensionality. Our analysis for low-dimensional data builds upon a universal approximation theory of neural networks with Lipschitz continuity guarantees, which may be of independent interest.
This paper studies the design of two-wave experiments in the presence of spillover effects when the researcher aims to conduct precise inference on treatment effects. We consider units connected through a single network, local dependence among individuals, and a general class of estimands encompassing average treatment and average spillover effects. We introduce a statistical framework for designing two-wave experiments with networks, where the researcher optimizes over participants and treatment assignments to minimize the variance of the estimators of interest, using a first-wave (pilot) experiment to estimate the variance. We derive guarantees for inference on treatment effects and regret guarantees on the variance obtained from the proposed design mechanism. Our results illustrate the existence of a trade-off in the choice of the pilot study and formally characterize the pilot's size relative to the main experiment. Simulations using simulated and real-world networks illustrate the advantages of the method.
Face anti-spoofing (FAS) approaches based on unsupervised domain adaption (UDA) have drawn growing attention due to promising performances for target scenarios. Most existing UDA FAS methods typically fit the trained models to the target domain via aligning the distribution of semantic high-level features. However, insufficient supervision of unlabeled target domains and neglect of low-level feature alignment degrade the performances of existing methods. To address these issues, we propose a novel perspective of UDA FAS that directly fits the target data to the models, i.e., stylizes the target data to the source-domain style via image translation, and further feeds the stylized data into the well-trained source model for classification. The proposed Generative Domain Adaptation (GDA) framework combines two carefully designed consistency constraints: 1) Inter-domain neural statistic consistency guides the generator in narrowing the inter-domain gap. 2) Dual-level semantic consistency ensures the semantic quality of stylized images. Besides, we propose intra-domain spectrum mixup to further expand target data distributions to ensure generalization and reduce the intra-domain gap. Extensive experiments and visualizations demonstrate the effectiveness of our method against the state-of-the-art methods.
The Laplace approximation (LA) has been proposed as a method for approximating the marginal likelihood of statistical models with latent variables. However, the approximate maximum likelihood estimators (MLEs) based on the LA are often biased for binary or spatial data, and the corresponding Hessian matrix underestimates the standard errors of these approximate MLEs. A higher-order approximation has been proposed; however, it cannot be applied to complicated models such as correlated random effects models and does not provide consistent variance estimators. In this paper, we propose an enhanced LA (ELA) that provides the true MLE and its consistent variance estimator. We study its relationship to the variational Bayes method. We also introduce a new restricted maximum likelihood estimator (REMLE) for estimating dispersion parameters. The results of numerical studies show that the ELA provides a satisfactory MLE and REMLE, as well as their variance estimators for fixed parameters. The MLE and REMLE can be viewed as posterior mode and marginal posterior mode under flat priors, respectively. Some comparisons are also made with Bayesian procedures under different priors.
Deep operator learning has emerged as a promising tool for reduced-order modelling and PDE model discovery. Leveraging the expressive power of deep neural networks, especially in high dimensions, such methods learn the mapping between functional state variables. While proposed methods have assumed noise only in the dependent variables, experimental and numerical data for operator learning typically exhibit noise in the independent variables as well, since both variables represent signals that are subject to measurement error. In regression on scalar data, failure to account for noisy independent variables can lead to biased parameter estimates. With noisy independent variables, linear models fitted via ordinary least squares (OLS) will show attenuation bias, wherein the slope will be underestimated. In this work, we derive an analogue of attenuation bias for linear operator regression with white noise in both the independent and dependent variables. In the nonlinear setting, we computationally demonstrate underprediction of the action of the Burgers operator in the presence of noise in the independent variable. We propose error-in-variables (EiV) models for two operator regression methods, MOR-Physics and DeepONet, and demonstrate that these new models reduce bias in the presence of noisy independent variables for a variety of operator learning problems. Considering the Burgers operator in 1D and 2D, we demonstrate that EiV operator learning robustly recovers operators in high-noise regimes that defeat OLS operator learning. We also introduce an EiV model for time-evolving PDE discovery and show that OLS and EiV perform similarly in learning the Kuramoto-Sivashinsky evolution operator from corrupted data, suggesting that the effect of bias in OLS operator learning depends on the regularity of the target operator.
In a desired environmental protection system, groundwater may not be excluded. In addition to the problem of over-exploitation, in total disagreement with the concept of sustainable development, another not negligible issue concerns the groundwater contamination. Mainly, this aspect is due to intensive agricultural activities or industrialized areas. In literature, several papers have dealt with transport problem, especially for inverse problems in which the release history or the source location are identified. The innovative aim of the paper is to develop a data-driven model that is able to analyze multiple scenarios, even strongly non-linear, in order to solve forward and inverse transport problems, preserving the reliability of the results and reducing the uncertainty. Furthermore, this tool has the characteristic of providing extremely fast responses, essential to identify remediation strategies immediately. The advantages produced by the model were compared with literature studies. In this regard, a feedforward artificial neural network, which has been trained to handle different cases, represents the data-driven model. Firstly, to identify the concentration of the pollutant at specific observation points in the study area (forward problem); secondly, to deal with inverse problems identifying the release history at known source location; then, in case of one contaminant source, identifying the release history and, at the same time, the location of the source in a specific sub-domain of the investigated area. At last, the observation error is investigated and estimated. The results are satisfactorily achieved, highlighting the capability of the ANN to deal with multiple scenarios by approximating nonlinear functions without the physical point of view that describes the phenomenon, providing reliable results, with very low computational burden and uncertainty.
Deep learning-based semi-supervised learning (SSL) algorithms have led to promising results in medical images segmentation and can alleviate doctors' expensive annotations by leveraging unlabeled data. However, most of the existing SSL algorithms in literature tend to regularize the model training by perturbing networks and/or data. Observing that multi/dual-task learning attends to various levels of information which have inherent prediction perturbation, we ask the question in this work: can we explicitly build task-level regularization rather than implicitly constructing networks- and/or data-level perturbation-and-transformation for SSL? To answer this question, we propose a novel dual-task-consistency semi-supervised framework for the first time. Concretely, we use a dual-task deep network that jointly predicts a pixel-wise segmentation map and a geometry-aware level set representation of the target. The level set representation is converted to an approximated segmentation map through a differentiable task transform layer. Simultaneously, we introduce a dual-task consistency regularization between the level set-derived segmentation maps and directly predicted segmentation maps for both labeled and unlabeled data. Extensive experiments on two public datasets show that our method can largely improve the performance by incorporating the unlabeled data. Meanwhile, our framework outperforms the state-of-the-art semi-supervised medical image segmentation methods. Code is available at: //github.com/Luoxd1996/DTC
To address the sparsity and cold start problem of collaborative filtering, researchers usually make use of side information, such as social networks or item attributes, to improve recommendation performance. This paper considers the knowledge graph as the source of side information. To address the limitations of existing embedding-based and path-based methods for knowledge-graph-aware recommendation, we propose Ripple Network, an end-to-end framework that naturally incorporates the knowledge graph into recommender systems. Similar to actual ripples propagating on the surface of water, Ripple Network stimulates the propagation of user preferences over the set of knowledge entities by automatically and iteratively extending a user's potential interests along links in the knowledge graph. The multiple "ripples" activated by a user's historically clicked items are thus superposed to form the preference distribution of the user with respect to a candidate item, which could be used for predicting the final clicking probability. Through extensive experiments on real-world datasets, we demonstrate that Ripple Network achieves substantial gains in a variety of scenarios, including movie, book and news recommendation, over several state-of-the-art baselines.
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