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Given its status as a classic problem and its importance to both theoreticians and practitioners, edit distance provides an excellent lens through which to understand how the theoretical analysis of algorithms impacts practical implementations. From an applied perspective, the goals of theoretical analysis are to predict the empirical performance of an algorithm and to serve as a yardstick to design novel algorithms that perform well in practice. In this paper, we systematically survey the types of theoretical analysis techniques that have been applied to edit distance and evaluate the extent to which each one has achieved these two goals. These techniques include traditional worst-case analysis, worst-case analysis parametrized by edit distance or entropy or compressibility, average-case analysis, semi-random models, and advice-based models. We find that the track record is mixed. On one hand, two algorithms widely used in practice have been born out of theoretical analysis and their empirical performance is captured well by theoretical predictions. On the other hand, all the algorithms developed using theoretical analysis as a yardstick since then have not had any practical relevance. We conclude by discussing the remaining open problems and how they can be tackled.

This paper makes the first attempt to apply newly developed upwind GFDM for the meshless solution of two-phase porous flow equations. In the presented method, node cloud is used to flexibly discretize the computational domain, instead of complicated mesh generation. Combining with moving least square approximation and local Taylor expansion, spatial derivatives of oil-phase pressure at a node are approximated by generalized difference operators in the local influence domain of the node. By introducing the first-order upwind scheme of phase relative permeability, and combining the discrete boundary conditions, fully-implicit GFDM-based nonlinear discrete equations of the immiscible two-phase porous flow are obtained and solved by the nonlinear solver based on the Newton iteration method with the automatic differentiation, to avoid the additional computational cost and possible computational instability caused by sequentially coupled scheme. Two numerical examples are implemented to test the computational performances of the presented method. Detailed error analysis finds the two sources of the calculation error, roughly studies the convergence order thus find that the low-order error of GFDM makes the convergence order of GFDM lower than that of FDM when node spacing is small, and points out the significant effect of the symmetry or uniformity of the node collocation in the node influence domain on the accuracy of generalized difference operators, and the radius of the node influence domain should be small to achieve high calculation accuracy, which is a significant difference between the studied hyperbolic two-phase porous flow problem and the elliptic problems when GFDM is applied.

Weighted automata are a generalization of nondeterministic automata that associate a weight drawn from a semiring $K$ with every transition and every state. Their behaviours can be formalized either as weighted language equivalence or weighted bisimulation. In this paper we explore the properties of weighted automata in the framework of coalgebras over (i) the category $\mathsf{SMod}$ of semimodules over a semiring $K$ and $K$-linear maps, and (ii) the category $\mathsf{Set}$ of sets and maps. We show that the behavioural equivalences defined by the corresponding final coalgebras in these two cases characterize weighted language equivalence and weighted bisimulation, respectively. These results extend earlier work by Bonchi et al. using the category $\mathsf{Vect}$ of vector spaces and linear maps as the underlying model for weighted automata with weights drawn from a field $K$. The key step in our work is generalizing the notions of linear relation and linear bisimulation of Boreale from vector spaces to semimodules using the concept of the kernel of a $K$-linear map in the sense of universal algebra. We also provide an abstract procedure for forward partition refinement for computing weighted language equivalence. Since for weighted automata defined over semirings the problem is undecidable in general, it is guaranteed to halt only in special cases. We provide sufficient conditions for the termination of our procedure. Although the results are similar to those of Bonchi et al., many of our proofs are new, especially those about the coalgebra in $\mathsf{SMod}$ characterizing weighted language equivalence.

We describe a numerical algorithm for approximating the equilibrium-reduced density matrix and the effective (mean force) Hamiltonian for a set of system spins coupled strongly to a set of bath spins when the total system (system+bath) is held in canonical thermal equilibrium by weak coupling with a "super-bath". Our approach is a generalization of now standard typicality algorithms for computing the quantum expectation value of observables of bare quantum systems via trace estimators and Krylov subspace methods. In particular, our algorithm makes use of the fact that the reduced system density, when the bath is measured in a given random state, tends to concentrate about the corresponding thermodynamic averaged reduced system density. Theoretical error analysis and numerical experiments are given to validate the accuracy of our algorithm. Further numerical experiments demonstrate the potential of our approach for applications including the study of quantum phase transitions and entanglement entropy for long-range interaction systems.

In this article we suggest two discretization methods based on isogeometric analysis (IGA) for planar linear elasticity. On the one hand, we apply the well-known ansatz of weakly imposed symmetry for the stress tensor and obtain a well-posed mixed formulation. Such modified mixed problems have been already studied by different authors. But we concentrate on the exploitation of IGA results to handle also curved boundary geometries. On the other hand, we consider the more complicated situation of strong symmetry, i.e. we discretize the mixed weak form determined by the so-called Hellinger-Reissner variational principle. We show the existence of suitable approximate fields leading to an inf-sup stable saddle-point problem. For both discretization approaches we prove convergence statements and in case of weak symmetry we illustrate the approximation behavior by means of several numerical experiments.

Multigrid is a powerful solver for large-scale linear systems arising from discretized partial differential equations. The convergence theory of multigrid methods for symmetric positive definite problems has been well developed over the past decades, while, for nonsymmetric problems, such theory is still not mature. As a foundation for multigrid analysis, two-grid convergence theory plays an important role in motivating multigrid algorithms. Regarding two-grid methods for nonsymmetric problems, most previous works focus on the spectral radius of iteration matrix or rely on convergence measures that are typically difficult to compute in practice. Moreover, the existing results are confined to two-grid methods with exact solution of the coarse-grid system. In this paper, we analyze the convergence of a two-grid method for nonsymmetric positive definite problems (e.g., linear systems arising from the discretizations of convection-diffusion equations). In the case of exact coarse solver, we establish an elegant identity for characterizing two-grid convergence factor, which is measured by a smoother-induced norm. The identity can be conveniently used to derive a class of optimal restriction operators and analyze how the convergence factor is influenced by restriction. More generally, we present some convergence estimates for an inexact variant of the two-grid method, in which both linear and nonlinear coarse solvers are considered.

Generalized pair weights of linear codes are generalizations of minimum symbol-pair weights, which were introduced by Liu and Pan \cite{LP} recently. Generalized pair weights can be used to characterize the ability of protecting information in the symbol-pair read wire-tap channels of type II. In this paper, we introduce the notion of generalized $b$-symbol weights of linear codes over finite fields, which is a generalization of generalized Hamming weights and generalized pair weights. We obtain some basic properties and bounds of generalized $b$-symbol weights which are called Singleton-like bounds for generalized $b$-symbol weights. As examples, we calculate generalized weight matrices for simplex codes and Hamming codes. We provide a necessary and sufficient condition for a linear code to be a $b$-symbol MDS code by using the generator matrix and the parity check matrix of this linear code. Finally, a necessary and sufficient condition of a linear isomorphism preserving $b$-symbol weights between two linear codes is obtained. As a corollary, we get the classical MacWilliams extension theorem when $b=1$.

The minimum energy path (MEP) describes the mechanism of reaction, and the energy barrier along the path can be used to calculate the reaction rate in thermal systems. The nudged elastic band (NEB) method is one of the most commonly used schemes to compute MEPs numerically. It approximates an MEP by a discrete set of configuration images, where the discretization size determines both computational cost and accuracy of the simulations. In this paper, we consider a discrete MEP to be a stationary state of the NEB method and prove an optimal convergence rate of the discrete MEP with respect to the number of images. Numerical simulations for the transitions of some several proto-typical model systems are performed to support the theory.

Most existing works of polar codes focus on the analysis of block error probability. However, in many scenarios, bit error probability is also important for evaluating the performance of channel codes. In this paper, we establish a new framework to analyze the bit error probability of polar codes. Specifically, by revisiting the error event of bit-channel, we first introduce the conditional bit error probability as a metric to evaluate the reliability of bit-channel for both systematic and non-systematic polar codes. Guided by the concept of polar subcode, we then derive an upper bound on the conditional bit error probability of each bit-channel, and accordingly, an upper bound on the bit error probability of polar codes. Based on these, two types of construction metrics aiming at minimizing the bit error probability of polar codes are proposed, which are of linear computational complexity and explicit forms. Simulation results show that the polar codes constructed by the proposed methods can outperform those constructed by the conventional methods.

A new numerical method for mean field games (MFGs) is proposed. The target MFGs are derived from optimal control problems for multidimensional systems with advection terms, which are difficult to solve numerically with existing methods. For such MFGs, linearization using the Cole-Hopf transformation and iterative computation using fictitious play are introduced. This leads to an implementation-friendly algorithm that iteratively solves explicit schemes. The convergence properties of the proposed scheme are mathematically proved by tracking the error of the variable through iterations. Numerical calculations show that the proposed method works stably for both one- and two-dimensional control problems.