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This article introduces a general mesh intersection algorithm that exactly computes the so-called Weiler model and that uses it to implement boolean operations with arbitrary multi-operand expressions, CSG (constructive solid geometry) and some mesh repair operations. From an input polygon soup, the algorithm first computes the co-refinement, with an exact representation of the intersection points. Then, the decomposition of 3D space into volumetric regions (Weiler model) is constructed, by sorting the facets around the non-manifold intersection edges (radial sort), using specialized exact predicates. Finally, based on the input boolean expression, the triangular facets that belong to the boundary of the result are classified. This is, to our knowledge, the first algorithm that computes an exact Weiler model. To implement all the involved predicates and constructions, two geometric kernels are proposed, tested and discussed (arithmetic expansions and multi-precision floating-point). As a guiding principle,the combinatorial information shared between each step is kept as simple as possible. It is made possible by treating all the particular cases in the kernel. In particular, triangles with intersections are remeshed using the (uniquely defined) Constrained Delaunay Triangulation, with symbolic perturbations to disambiguate configurations with co-cyclic points. It makes it easy to discard the duplicated triangles that appear when remeshing overlapping facets. The method is tested and compared with previous work, on the existing "thingi10K" dataset (to test co-refinement and mesh repair) and on a new "thingiCSG" dataset made publicly available (to test the full CSG pipeline) on a variety of interesting examples featuring different types of "pathologies"

Various iterative eigenvalue solvers have been developed to compute parts of the spectrum for a large sparse matrix, including the power method, Krylov subspace methods, contour integral methods, and preconditioned solvers such as the so called LOBPCG method. All of these solvers rely on random matrices to determine, e.g., starting vectors that have, with high probability, a non-negligible overlap with the eigenvectors of interest. For this purpose, a safe and common choice are unstructured Gaussian random matrices. In this work, we investigate the use of random Khatri-Rao products in eigenvalue solvers. On the one hand, we establish a novel subspace embedding property that provides theoretical justification for the use of such structured random matrices. On the other hand, we highlight the potential algorithmic benefits when solving eigenvalue problems with Kronecker product structure, as they arise frequently from the discretization of eigenvalue problems for differential operators on tensor product domains. In particular, we consider the use of random Khatri-Rao products within a contour integral method and LOBPCG. Numerical experiments indicate that the gains for the contour integral method strongly depend on the ability to efficiently and accurately solve (shifted) matrix equations with low-rank right-hand side. The flexibility of LOBPCG to directly employ preconditioners makes it easier to benefit from Khatri-Rao product structure, at the expense of having less theoretical justification.

We propose an operator learning approach to accelerate geometric Markov chain Monte Carlo (MCMC) for solving infinite-dimensional Bayesian inverse problems (BIPs). While geometric MCMC employs high-quality proposals that adapt to posterior local geometry, it requires repeated computations of gradients and Hessians of the log-likelihood, which becomes prohibitive when the parameter-to-observable (PtO) map is defined through expensive-to-solve parametric partial differential equations (PDEs). We consider a delayed-acceptance geometric MCMC method driven by a neural operator surrogate of the PtO map, where the proposal exploits fast surrogate predictions of the log-likelihood and, simultaneously, its gradient and Hessian. To achieve a substantial speedup, the surrogate must accurately approximate the PtO map and its Jacobian, which often demands a prohibitively large number of PtO map samples via conventional operator learning methods. In this work, we present an extension of derivative-informed operator learning [O'Leary-Roseberry et al., J. Comput. Phys., 496 (2024)] that uses joint samples of the PtO map and its Jacobian. This leads to derivative-informed neural operator (DINO) surrogates that accurately predict the observables and posterior local geometry at a significantly lower training cost than conventional methods. Cost and error analysis for reduced basis DINO surrogates are provided. Numerical studies demonstrate that DINO-driven MCMC generates effective posterior samples 3--9 times faster than geometric MCMC and 60--97 times faster than prior geometry-based MCMC. Furthermore, the training cost of DINO surrogates breaks even compared to geometric MCMC after just 10--25 effective posterior samples.

This paper focuses on studying the convergence rate of the density function of the Euler--Maruyama (EM) method, when applied to the overdamped generalized Langevin equation with fractional noise which serves as an important model in many fields. Firstly, we give an improved upper bound estimate for the total variation distance between random variables by their Malliavin--Sobolev norms. Secondly, we establish the existence and smoothness of the density function for both the exact solution and the numerical one. Based on the above results, the convergence rate of the density function of the numerical solution is obtained, which relies on the regularity of the noise and kernel. This convergence result provides a powerful support for numerically capturing the statistical information of the exact solution through the EM method.

Among randomized numerical linear algebra strategies, so-called sketching procedures are emerging as effective reduction means to accelerate the computation of Krylov subspace methods for, e.g., the solution of linear systems, eigenvalue computations, and the approximation of matrix functions. While there is plenty of experimental evidence showing that sketched Krylov solvers may dramatically improve performance over standard Krylov methods, many features of these schemes are still unexplored. We derive a new sketched Arnoldi-type relation that allows us to obtain several different new theoretical results. These lead to an improvement of our understanding of sketched Krylov methods, and to identifying, among several possible equivalent formulations, the most suitable sketched approximations according to their numerical stability properties. These results are also employed to analyze the error of sketched Krylov methods in the approximation of the action of matrix functions, significantly contributing to the theory available in the current literature.

We construct a simple and robust finite volume discretization for linearized mechanics, Stokes and poromechanics, based only on co-located, cell-centered variables. The discretization has a minimal stencil, using only the two neighboring cells to a face to calculate numerical stresses and fluxes. We fully justify the method theoretically in terms of stability and convergence, both of which are robust in terms of the material parameters. Numerical experiments support the theoretical results, and shed light on grid families not explicitly treated by the theoretical results.

Dimensionality reduction algorithms are often used to visualise high-dimensional data. Previously, studies have used prior information to enhance or suppress expected patterns in projections. In this paper, we adapt such techniques for domain knowledge guided interactive exploration. Inspired by Mapper and STAD, we present three types of lens functions for UMAP, a state-of-the-art dimensionality reduction algorithm. Lens functions enable analysts to adapt projections to their questions, revealing otherwise hidden patterns. They filter the modelled connectivity to explore the interaction between manually selected features and the data's structure, creating configurable perspectives each potentially revealing new insights. The effectiveness of the lens functions is demonstrated in two use cases and their computational cost is analysed in a synthetic benchmark. Our implementation is available in an open-source Python package: //github.com/vda-lab/lensed_umap.

This paper develops an in-depth treatment concerning the problem of approximating the Gaussian smoothing and Gaussian derivative computations in scale-space theory for application on discrete data. With close connections to previous axiomatic treatments of continuous and discrete scale-space theory, we consider three main ways discretizing these scale-space operations in terms of explicit discrete convolutions, based on either (i) sampling the Gaussian kernels and the Gaussian derivative kernels, (ii) locally integrating the Gaussian kernels and the Gaussian derivative kernels over each pixel support region and (iii) basing the scale-space analysis on the discrete analogue of the Gaussian kernel, and then computing derivative approximations by applying small-support central difference operators to the spatially smoothed image data. We study the properties of these three main discretization methods both theoretically and experimentally, and characterize their performance by quantitative measures, including the results they give rise to with respect to the task of scale selection, investigated for four different use cases, and with emphasis on the behaviour at fine scales. The results show that the sampled Gaussian kernels and derivatives as well as the integrated Gaussian kernels and derivatives perform very poorly at very fine scales. At very fine scales, the discrete analogue of the Gaussian kernel with its corresponding discrete derivative approximations performs substantially better. The sampled Gaussian kernel and the sampled Gaussian derivatives do, on the other hand, lead to numerically very good approximations of the corresponding continuous results, when the scale parameter is sufficiently large, in the experiments presented in the paper, when the scale parameter is greater than a value of about 1, in units of the grid spacing.

We study stochastic approximation procedures for approximately solving a $d$-dimensional linear fixed point equation based on observing a trajectory of length $n$ from an ergodic Markov chain. We first exhibit a non-asymptotic bound of the order $t_{\mathrm{mix}} \tfrac{d}{n}$ on the squared error of the last iterate of a standard scheme, where $t_{\mathrm{mix}}$ is a mixing time. We then prove a non-asymptotic instance-dependent bound on a suitably averaged sequence of iterates, with a leading term that matches the local asymptotic minimax limit, including sharp dependence on the parameters $(d, t_{\mathrm{mix}})$ in the higher order terms. We complement these upper bounds with a non-asymptotic minimax lower bound that establishes the instance-optimality of the averaged SA estimator. We derive corollaries of these results for policy evaluation with Markov noise -- covering the TD($\lambda$) family of algorithms for all $\lambda \in [0, 1)$ -- and linear autoregressive models. Our instance-dependent characterizations open the door to the design of fine-grained model selection procedures for hyperparameter tuning (e.g., choosing the value of $\lambda$ when running the TD($\lambda$) algorithm).

This note shows how to compute, to high relative accuracy under mild assumptions, complex Jacobi rotations for diagonalization of Hermitian matrices of order two, using the correctly rounded functions $\mathtt{cr\_hypot}$ and $\mathtt{cr\_rsqrt}$, proposed for standardization in the C programming language as recommended by the IEEE-754 floating-point standard. The rounding to nearest (ties to even) and the non-stop arithmetic are assumed. The numerical examples compare the observed with theoretical bounds on the relative errors in the rotations' elements, and show that the maximal observed departure of the rotations' determinants from unity is smaller than that of the transformations computed by LAPACK.