Automatically classifying cough sounds is one of the most critical tasks for the diagnosis and treatment of respiratory diseases. However, collecting a huge amount of labeled cough dataset is challenging mainly due to high laborious expenses, data scarcity, and privacy concerns. In this work, our aim is to develop a framework that can effectively perform cough classification even in situations when enormous cough data is not available, while also addressing privacy concerns. Specifically, we formulate a new problem to tackle these challenges and adopt few-shot learning and federated learning to design a novel framework, termed F2LCough, for solving the newly formulated problem. We illustrate the superiority of our method compared with other approaches on COVID-19 Thermal Face & Cough dataset, in which F2LCough achieves an average F1-Score of 86%. Our results show the feasibility of few-shot learning combined with federated learning to build a classification model of cough sounds. This new methodology is able to classify cough sounds in data-scarce situations and maintain privacy properties. The outcomes of this work can be a fundamental framework for building support systems for the detection and diagnosis of cough-related diseases.
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Rapid and accurate identification of Venous thromboembolism (VTE), a severe cardiovascular condition including deep vein thrombosis (DVT) and pulmonary embolism (PE), is important for effective treatment. Leveraging Natural Language Processing (NLP) on radiology reports, automated methods have shown promising advancements in identifying VTE events from retrospective data cohorts or aiding clinical experts in identifying VTE events from radiology reports. However, effectively training Deep Learning (DL) and the NLP models is challenging due to limited labeled medical text data, the complexity and heterogeneity of radiology reports, and data imbalance. This study proposes novel method combinations of DL methods, along with data augmentation, adaptive pre-trained NLP model selection, and a clinical expert NLP rule-based classifier, to improve the accuracy of VTE identification in unstructured (free-text) radiology reports. Our experimental results demonstrate the model's efficacy, achieving an impressive 97\% accuracy and 97\% F1 score in predicting DVT, and an outstanding 98.3\% accuracy and 98.4\% F1 score in predicting PE. These findings emphasize the model's robustness and its potential to significantly contribute to VTE research.
Constructing responses in task-oriented dialogue systems typically relies on information sources such the current dialogue state or external databases. This paper presents a novel approach to knowledge-grounded response generation that combines retrieval-augmented language models with logical reasoning. The approach revolves around a knowledge graph representing the current dialogue state and background information, and proceeds in three steps. The knowledge graph is first enriched with logically derived facts inferred using probabilistic logical programming. A neural model is then employed at each turn to score the conversational relevance of each node and edge of this extended graph. Finally, the elements with highest relevance scores are converted to a natural language form, and are integrated into the prompt for the neural conversational model employed to generate the system response. We investigate the benefits of the proposed approach on two datasets (KVRET and GraphWOZ) along with a human evaluation. Experimental results show that the combination of (probabilistic) logical reasoning with conversational relevance scoring does increase both the factuality and fluency of the responses.
Quality classification of wood boards is an essential task in the sawmill industry, which is still usually performed by human operators in small to median companies in developing countries. Machine learning algorithms have been successfully employed to investigate the problem, offering a more affordable alternative compared to other solutions. However, such approaches usually present some drawbacks regarding the proper selection of their hyperparameters. Moreover, the models are susceptible to the features extracted from wood board images, which influence the induction of the model and, consequently, its generalization power. Therefore, in this paper, we investigate the problem of simultaneously tuning the hyperparameters of an artificial neural network (ANN) as well as selecting a subset of characteristics that better describes the wood board quality. Experiments were conducted over a private dataset composed of images obtained from a sawmill industry and described using different feature descriptors. The predictive performance of the model was compared against five baseline methods as well as a random search, performing either ANN hyperparameter tuning and feature selection. Experimental results suggest that hyperparameters should be adjusted according to the feature set, or the features should be selected considering the hyperparameter values. In summary, the best predictive performance, i.e., a balanced accuracy of $0.80$, was achieved in two distinct scenarios: (i) performing only feature selection, and (ii) performing both tasks concomitantly. Thus, we suggest that at least one of the two approaches should be considered in the context of industrial applications.
Remote medical diagnosis has emerged as a critical and indispensable technique in practical medical systems, where medical data are required to be efficiently compressed and transmitted for diagnosis by either professional doctors or intelligent diagnosis devices. In this process, a large amount of redundant content irrelevant to the diagnosis is subjected to high-fidelity coding, leading to unnecessary transmission costs. To mitigate this, we propose diagnosis-oriented medical image compression, a special semantic compression task designed for medical scenarios, targeting to reduce the compression cost without compromising the diagnosis accuracy. However, collecting sufficient medical data to optimize such a compression system is significantly expensive and challenging due to privacy issues and the lack of professional annotation. In this study, we propose DMIC, the first efficient transfer learning-based codec, for diagnosis-oriented medical image compression, which can be effectively optimized with only few-shot annotated medical examples, by reusing the knowledge in the existing reinforcement learning-based task-driven semantic coding framework, i.e., HRLVSC [1]. Concretely, we focus on tuning only the partial parameters of the policy network for bit allocation within HRLVSC, which enables it to adapt to the medical images. In this work, we validate our DMIC with the typical medical task, Coronary Artery Segmentation. Extensive experiments have demonstrated that our DMIC can achieve 47.594%BD-Rate savings compared to the HEVC anchor, by tuning only the A2C module (2.7% parameters) of the policy network with only 1 medical sample.
With the emergence of powerful representations of continuous data in the form of neural fields, there is a need for discretization invariant learning: an approach for learning maps between functions on continuous domains without being sensitive to how the function is sampled. We present a new framework for understanding and designing discretization invariant neural networks (DI-Nets), which generalizes many discrete networks such as convolutional neural networks as well as continuous networks such as neural operators. Our analysis establishes upper bounds on the deviation in model outputs under different finite discretizations, and highlights the central role of point set discrepancy in characterizing such bounds. This insight leads to the design of a family of neural networks driven by numerical integration via quasi-Monte Carlo sampling with discretizations of low discrepancy. We prove by construction that DI-Nets universally approximate a large class of maps between integrable function spaces, and show that discretization invariance also describes backpropagation through such models. Applied to neural fields, convolutional DI-Nets can learn to classify and segment visual data under various discretizations, and sometimes generalize to new types of discretizations at test time. Code: //github.com/clintonjwang/DI-net.
Automatic methods for early detection of breast cancer on mammography can significantly decrease mortality. Broad uptake of those methods in hospitals is currently hindered because the methods have too many constraints. They assume annotations available for single images or even regions-of-interest (ROIs), and a fixed number of images per patient. Both assumptions do not hold in a general hospital setting. Relaxing those assumptions results in a weakly supervised learning setting, where labels are available per case, but not for individual images or ROIs. Not all images taken for a patient contain malignant regions and the malignant ROIs cover only a tiny part of an image, whereas most image regions represent benign tissue. In this work, we investigate a two-level multi-instance learning (MIL) approach for case-level breast cancer prediction on two public datasets (1.6k and 5k cases) and an in-house dataset of 21k cases. Observing that breast cancer is usually only present in one side, while images of both breasts are taken as a precaution, we propose a domain-specific MIL pooling variant. We show that two-level MIL can be applied in realistic clinical settings where only case labels, and a variable number of images per patient are available. Data in realistic settings scales with continuous patient intake, while manual annotation efforts do not. Hence, research should focus in particular on unsupervised ROI extraction, in order to improve breast cancer prediction for all patients.
Heart disease, also known as cardiovascular disease, is a prevalent and critical medical condition characterized by the impairment of the heart and blood vessels, leading to various complications such as coronary artery disease, heart failure, and myocardial infarction. The timely and accurate detection of heart disease is of paramount importance in clinical practice. Early identification of individuals at risk enables proactive interventions, preventive measures, and personalized treatment strategies to mitigate the progression of the disease and reduce adverse outcomes. In recent years, the field of heart disease detection has witnessed notable advancements due to the integration of sophisticated technologies and computational approaches. These include machine learning algorithms, data mining techniques, and predictive modeling frameworks that leverage vast amounts of clinical and physiological data to improve diagnostic accuracy and risk stratification. In this work, we propose to detect heart disease from ECG images using cutting-edge technologies, namely vision transformer models. These models are Google-Vit, Microsoft-Beit, and Swin-Tiny. To the best of our knowledge, this is the initial endeavor concentrating on the detection of heart diseases through image-based ECG data by employing cuttingedge technologies namely, transformer models. To demonstrate the contribution of the proposed framework, the performance of vision transformer models are compared with state-of-the-art studies. Experiment results show that the proposed framework exhibits remarkable classification results.
Medical image fusion combines the complementary information of multimodal medical images to assist medical professionals in the clinical diagnosis of patients' disorders and provide guidance during preoperative and intra-operative procedures. Deep learning (DL) models have achieved end-to-end image fusion with highly robust and accurate fusion performance. However, most DL-based fusion models perform down-sampling on the input images to minimize the number of learnable parameters and computations. During this process, salient features of the source images become irretrievable leading to the loss of crucial diagnostic edge details and contrast of various brain tissues. In this paper, we propose a new multimodal medical image fusion model is proposed that is based on integrated Laplacian-Gaussian concatenation with attention pooling (LGCA). We prove that our model preserves effectively complementary information and important tissue structures.
Medical image segmentation is a fundamental and critical step in many image-guided clinical approaches. Recent success of deep learning-based segmentation methods usually relies on a large amount of labeled data, which is particularly difficult and costly to obtain especially in the medical imaging domain where only experts can provide reliable and accurate annotations. Semi-supervised learning has emerged as an appealing strategy and been widely applied to medical image segmentation tasks to train deep models with limited annotations. In this paper, we present a comprehensive review of recently proposed semi-supervised learning methods for medical image segmentation and summarized both the technical novelties and empirical results. Furthermore, we analyze and discuss the limitations and several unsolved problems of existing approaches. We hope this review could inspire the research community to explore solutions for this challenge and further promote the developments in medical image segmentation field.
Object tracking is challenging as target objects often undergo drastic appearance changes over time. Recently, adaptive correlation filters have been successfully applied to object tracking. However, tracking algorithms relying on highly adaptive correlation filters are prone to drift due to noisy updates. Moreover, as these algorithms do not maintain long-term memory of target appearance, they cannot recover from tracking failures caused by heavy occlusion or target disappearance in the camera view. In this paper, we propose to learn multiple adaptive correlation filters with both long-term and short-term memory of target appearance for robust object tracking. First, we learn a kernelized correlation filter with an aggressive learning rate for locating target objects precisely. We take into account the appropriate size of surrounding context and the feature representations. Second, we learn a correlation filter over a feature pyramid centered at the estimated target position for predicting scale changes. Third, we learn a complementary correlation filter with a conservative learning rate to maintain long-term memory of target appearance. We use the output responses of this long-term filter to determine if tracking failure occurs. In the case of tracking failures, we apply an incrementally learned detector to recover the target position in a sliding window fashion. Extensive experimental results on large-scale benchmark datasets demonstrate that the proposed algorithm performs favorably against the state-of-the-art methods in terms of efficiency, accuracy, and robustness.
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