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The Second DiCOVA Challenge aims at accelerating the research in diagnosing COVID-19 using acoustics (DiCOVA), a topic at the intersection of acoustics signal processing, machine learning, and healthcare. This challenge is an open call to researchers to analyze a dataset of audio recordings, collected from individuals with and without COVID-19, for a two-class classification. The development set audio recordings correspond to breathing, cough, and speech sound samples collected from 965 (172 COVID) individuals. The challenge features four tracks, one associated with each sound category and a fourth fusion track allowing experimentation with combination of the individual sound categories. In this paper, we introduce the challenge and provide a detailed description of the task and a baseline system.

Consistent segmentation of COVID-19 patient's CT scans across multiple time points is essential to assess disease progression and response to therapy accurately. Existing automatic and interactive segmentation models for medical images only use data from a single time point (static). However, valuable segmentation information from previous time points is often not used to aid the segmentation of a patient's follow-up scans. Also, fully automatic segmentation techniques frequently produce results that would need further editing for clinical use. In this work, we propose a new single network model for interactive segmentation that fully utilizes all available past information to refine the segmentation of follow-up scans. In the first segmentation round, our model takes 3D volumes of medical images from two-time points (target and reference) as concatenated slices with the additional reference time point segmentation as a guide to segment the target scan. In subsequent segmentation refinement rounds, user feedback in the form of scribbles that correct the segmentation and the target's previous segmentation results are additionally fed into the model. This ensures that the segmentation information from previous refinement rounds is retained. Experimental results on our in-house multiclass longitudinal COVID-19 dataset show that the proposed model outperforms its static version and can assist in localizing COVID-19 infections in patient's follow-up scans.

The literature shows outstanding capabilities for CNNs in event recognition in images. However, fewer attempts are made to analyze the potential causes behind the decisions of the models and exploring whether the predictions are based on event-salient objects or regions? To explore this important aspect of event recognition, in this work, we propose an explainable event recognition framework relying on Grad-CAM and an Xception architecture-based CNN model. Experiments are conducted on three large-scale datasets covering a diversified set of natural disasters, social, and sports events. Overall, the model showed outstanding generalization capabilities obtaining overall F1-scores of 0.91, 0.94, and 0.97 on natural disasters, social, and sports events, respectively. Moreover, for subjective analysis of activation maps generated through Grad-CAM for the predicted samples of the model, a crowdsourcing study is conducted to analyze whether the model's predictions are based on event-related objects/regions or not? The results of the study indicate that 78%, 84%, and 78% of the model decisions on natural disasters, sports, and social events datasets, respectively, are based onevent-related objects or regions.

There are many ways machine learning and big data analytics are used in the fight against the COVID-19 pandemic, including predictions, risk management, diagnostics, and prevention. This study focuses on predicting COVID-19 patient shielding -- identifying and protecting patients who are clinically extremely vulnerable from coronavirus. This study focuses on techniques used for the multi-label classification of medical text. Using the information published by the United Kingdom NHS and the World Health Organisation, we present a novel approach to predicting COVID-19 patient shielding as a multi-label classification problem. We use publicly available, de-identified ICU medical text data for our experiments. The labels are derived from the published COVID-19 patient shielding data. We present an extensive comparison across 12 multi-label classifiers from the simple binary relevance to neural networks and the most recent transformers. To the best of our knowledge this is the first comprehensive study, where such a range of multi-label classifiers for medical text are considered. We highlight the benefits of various approaches, and argue that, for the task at hand, both predictive accuracy and processing time are essential.

In this paper, we tackle the unsupervised domain adaptation (UDA) for semantic segmentation, which aims to segment the unlabeled real data using labeled synthetic data. The main problem of UDA for semantic segmentation relies on reducing the domain gap between the real image and synthetic image. To solve this problem, we focused on separating information in an image into content and style. Here, only the content has cues for semantic segmentation, and the style makes the domain gap. Thus, precise separation of content and style in an image leads to effect as supervision of real data even when learning with synthetic data. To make the best of this effect, we propose a zero-style loss. Even though we perfectly extract content for semantic segmentation in the real domain, another main challenge, the class imbalance problem, still exists in UDA for semantic segmentation. We address this problem by transferring the contents of tail classes from synthetic to real domain. Experimental results show that the proposed method achieves the state-of-the-art performance in semantic segmentation on the major two UDA settings.

In recent years, misinformation on the Web has become increasingly rampant. The research community has responded by proposing systems and challenges, which are beginning to be useful for (various subtasks of) detecting misinformation. However, most proposed systems are based on deep learning techniques which are fine-tuned to specific domains, are difficult to interpret and produce results which are not machine readable. This limits their applicability and adoption as they can only be used by a select expert audience in very specific settings. In this paper we propose an architecture based on a core concept of Credibility Reviews (CRs) that can be used to build networks of distributed bots that collaborate for misinformation detection. The CRs serve as building blocks to compose graphs of (i) web content, (ii) existing credibility signals --fact-checked claims and reputation reviews of websites--, and (iii) automatically computed reviews. We implement this architecture on top of lightweight extensions to Schema.org and services providing generic NLP tasks for semantic similarity and stance detection. Evaluations on existing datasets of social-media posts, fake news and political speeches demonstrates several advantages over existing systems: extensibility, domain-independence, composability, explainability and transparency via provenance. Furthermore, we obtain competitive results without requiring finetuning and establish a new state of the art on the Clef'18 CheckThat! Factuality task.

Deep learning has become the most widely used approach for cardiac image segmentation in recent years. In this paper, we provide a review of over 100 cardiac image segmentation papers using deep learning, which covers common imaging modalities including magnetic resonance imaging (MRI), computed tomography (CT), and ultrasound (US) and major anatomical structures of interest (ventricles, atria and vessels). In addition, a summary of publicly available cardiac image datasets and code repositories are included to provide a base for encouraging reproducible research. Finally, we discuss the challenges and limitations with current deep learning-based approaches (scarcity of labels, model generalizability across different domains, interpretability) and suggest potential directions for future research.

Recently, artificial intelligence, especially machine learning has demonstrated remarkable performances in many tasks, from image processing to natural language processing, especially with the advent of deep learning. Along with research progress, machine learning has encroached into many different fields and disciplines. Some of them, such as the medical field, require high level of accountability, and thus transparency, which means we need to be able to explain machine decisions, predictions and justify their reliability. This requires greater interpretability, which often means we need to understand the mechanism underlying the algorithms. Unfortunately, the black-box nature of the deep learning is still unresolved, and many machine decisions are still poorly understood. We provide a review on interpretabilities suggested by different research works and categorize them. Also, within an exhaustive list of papers, we find that interpretability is often algorithm-centric, with few human-subject tests to verify whether proposed methods indeed enhance human interpretability. We explore further into interpretability in the medical field, illustrating the complexity of interpretability issue.

Deep learning has shown promising results in medical image analysis, however, the lack of very large annotated datasets confines its full potential. Although transfer learning with ImageNet pre-trained classification models can alleviate the problem, constrained image sizes and model complexities can lead to unnecessary increase in computational cost and decrease in performance. As many common morphological features are usually shared by different classification tasks of an organ, it is greatly beneficial if we can extract such features to improve classification with limited samples. Therefore, inspired by the idea of curriculum learning, we propose a strategy for building medical image classifiers using features from segmentation networks. By using a segmentation network pre-trained on similar data as the classification task, the machine can first learn the simpler shape and structural concepts before tackling the actual classification problem which usually involves more complicated concepts. Using our proposed framework on a 3D three-class brain tumor type classification problem, we achieved 82% accuracy on 191 testing samples with 91 training samples. When applying to a 2D nine-class cardiac semantic level classification problem, we achieved 86% accuracy on 263 testing samples with 108 training samples. Comparisons with ImageNet pre-trained classifiers and classifiers trained from scratch are presented.

In this paper we introduce a covariance framework for the analysis of EEG and MEG data that takes into account observed temporal stationarity on small time scales and trial-to-trial variations. We formulate a model for the covariance matrix, which is a Kronecker product of three components that correspond to space, time and epochs/trials, and consider maximum likelihood estimation of the unknown parameter values. An iterative algorithm that finds approximations of the maximum likelihood estimates is proposed. We perform a simulation study to assess the performance of the estimator and investigate the influence of different assumptions about the covariance factors on the estimated covariance matrix and on its components. Apart from that, we illustrate our method on real EEG and MEG data sets. The proposed covariance model is applicable in a variety of cases where spontaneous EEG or MEG acts as source of noise and realistic noise covariance estimates are needed for accurate dipole localization, such as in evoked activity studies, or where the properties of spontaneous EEG or MEG are themselves the topic of interest, such as in combined EEG/fMRI experiments in which the correlation between EEG and fMRI signals is investigated.