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This paper refines the existing axiomatic semantics of digital circuits with delay and feedback, in which circuits are constructed as morphisms in a freely generated cartesian traced (dataflow) category. First, we give a cleaner presentation, making a clearer distinction between syntax and semantics, including a full formalisation of the semantics as stream functions. As part of this effort, we refocus the categorical framework through the lens of string diagrams, which not only makes reading equations more intuitive but removes bureaucracy such as associativity from proofs. We also extend the existing framework with a new axiom, inspired by the Kleene fixed-point theorem, which allows circuits with non-delay-guarded feedback, typically handled poorly by traditional methodologies, to be replaced with a series of finitely iterated circuits. This eliminates the possibility of infinitely unfolding a circuit; instead, one can always reduce a circuit to some (possibly undefined) value. To fully characterise the stream functions that correspond to digital circuits, we examine how the behaviour of the latter can be modelled using Mealy machines. By establishing that the translation between sequential circuits and Mealy machines preserves their behaviour, one can observe that circuits always implement monotone stream functions with finite stream derivatives.

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Let $\sigma$ be a first-order signature and let $\mathbf{W}_n$ be the set of all $\sigma$-structures with domain $[n] = \{1, \ldots, n\}$. We can think of each structure in $\mathbf{W}_n$ as representing a "possible (state of the) world". By an inference framework we mean a class $\mathbf{F}$ of pairs $(\mathbb{P}, L)$, where $\mathbb{P} = (\mathbb{P}_n : n = 1, 2, 3, \ldots)$ and each $\mathbb{P}_n$ is a probability distribution on $\mathbb{W}_n$, and $L$ is a logic with truth values in the unit interval $[0, 1]$. From the point of view of probabilistic and logical expressivity one may consider an inference framework as optimal if it allows any pair $(\mathbb{P}, L)$ where $\mathbb{P} = (\mathbb{P}_n : n = 1, 2, 3, \ldots)$ is a sequence of probability distributions on $\mathbb{W}_n$ and $L$ is a logic. But from the point of view of using a pair $(\mathbb{P}, L)$ from such an inference framework for making inferences on $\mathbb{W}_n$ when $n$ is large we face the problem of computational complexity. This motivates looking for an "optimal" trade-off (in a given context) between expressivity and computational efficiency. We define a notion that an inference framework is "asymptotically at least as expressive" as another inference framework. This relation is a preorder and we describe a (strict) partial order on the equivalence classes of some inference frameworks that in our opinion are natural in the context of machine learning and artificial intelligence. The results have bearing on issues concerning efficient learning and probabilistic inference, but are also new instances of results in finite model theory about "almost sure elimination" of extra syntactic features (e.g quantifiers) beyond the connectives. Often such a result has a logical convergence law as a corollary.

We introduce a new constrained optimization method for policy gradient reinforcement learning, which uses two trust regions to regulate each policy update. In addition to using the proximity of one single old policy as the first trust region as done by prior works, we propose to form a second trust region through the construction of another virtual policy that represents a wide range of past policies. We then enforce the new policy to stay closer to the virtual policy, which is beneficial in case the old policy performs badly. More importantly, we propose a mechanism to automatically build the virtual policy from a memory buffer of past policies, providing a new capability for dynamically selecting appropriate trust regions during the optimization process. Our proposed method, dubbed as Memory-Constrained Policy Optimization (MCPO), is examined on a diverse suite of environments including robotic locomotion control, navigation with sparse rewards and Atari games, consistently demonstrating competitive performance against recent on-policy constrained policy gradient methods.

We define a new method for taking advantage of net reductions in combination with a SMT-based model checker. Our approach consists in transforming a reachability problem about some Petri net, into the verification of an updated reachability property on a reduced version of this net. This method relies on a new state space abstraction based on systems of constraints, called polyhedral abstraction. We prove the correctness of this method using a new notion of equivalence between nets. We provide a complete framework to define and check the correctness of equivalence judgements; prove that this relation is a congruence; and give examples of basic equivalence relations that derive from structural reductions. Our approach has been implemented in a tool, named SMPT, that provides two main procedures: Bounded Model Checking (BMC) and Property Directed Reachability (PDR). Each procedure has been adapted in order to use reductions and to work with arbitrary Petri nets. We tested SMPT on a large collection of queries used in the Model Checking Contest. Our experimental results show that our approach works well, even when we only have a moderate amount of reductions.

We present a data-efficient framework for solving sequential decision-making problems which exploits the combination of reinforcement learning (RL) and latent variable generative models. The framework, called GenRL, trains deep policies by introducing an action latent variable such that the feed-forward policy search can be divided into two parts: (i) training a sub-policy that outputs a distribution over the action latent variable given a state of the system, and (ii) unsupervised training of a generative model that outputs a sequence of motor actions conditioned on the latent action variable. GenRL enables safe exploration and alleviates the data-inefficiency problem as it exploits prior knowledge about valid sequences of motor actions. Moreover, we provide a set of measures for evaluation of generative models such that we are able to predict the performance of the RL policy training prior to the actual training on a physical robot. We experimentally determine the characteristics of generative models that have most influence on the performance of the final policy training on two robotics tasks: shooting a hockey puck and throwing a basketball. Furthermore, we empirically demonstrate that GenRL is the only method which can safely and efficiently solve the robotics tasks compared to two state-of-the-art RL methods.

Molecular mechanics (MM) potentials have long been a workhorse of computational chemistry. Leveraging accuracy and speed, these functional forms find use in a wide variety of applications in biomolecular modeling and drug discovery, from rapid virtual screening to detailed free energy calculations. Traditionally, MM potentials have relied on human-curated, inflexible, and poorly extensible discrete chemical perception rules or applying parameters to small molecules or biopolymers, making it difficult to optimize both types and parameters to fit quantum chemical or physical property data. Here, we propose an alternative approach that uses graph neural networks to perceive chemical environments, producing continuous atom embeddings from which valence and nonbonded parameters can be predicted using invariance-preserving layers. Since all stages are built from smooth neural functions, the entire process is modular and end-to-end differentiable with respect to model parameters, allowing new force fields to be easily constructed, extended, and applied to arbitrary molecules. We show that this approach is not only sufficiently expressive to reproduce legacy atom types, but that it can learn to accurately reproduce and extend existing molecular mechanics force fields. Trained with arbitrary loss functions, it can construct entirely new force fields self-consistently applicable to both biopolymers and small molecules directly from quantum chemical calculations, with superior fidelity than traditional atom or parameter typing schemes. When trained on the same quantum chemical small molecule dataset used to parameterize the openff-1.2.0 small molecule force field augmented with a peptide dataset, the resulting espaloma model shows superior accuracy vis-\`a-vis experiments in computing relative alchemical free energy calculations for a popular benchmark set.

Category theory can be used to state formulas in First-Order Logic without using set membership. Several notable results in logic such as proof of the continuum hypothesis can be elegantly rewritten in category theory. We propose in this paper a reformulation of the usual set-theoretical semantics of the description logic $\mathcal{ALC}$ by using categorical language. In this setting, ALC concepts are represented as objects, concept subsumptions as arrows, and memberships as logical quantifiers over objects and arrows of categories. Such a category-theoretical semantics provides a more modular representation of the semantics of $\mathcal{ALC}$ and a new way to design algorithms for reasoning.

Many forms of dependence manifest themselves over time, with behavior of variables in dynamical systems as a paradigmatic example. This paper studies temporal dependence in dynamical systems from a logical perspective, by extending a minimal modal base logic of static functional dependencies. We define a logic for dynamical systems with single time steps, provide a complete axiomatic proof calculus, and show the decidability of the satisfiability problem for a substantial fragment. The system comes in two guises: modal and first-order, that naturally complement each other. Next, we consider a timed semantics for our logic, as an intermediate between state spaces and temporal universes for the unfoldings of a dynamical system. We prove completeness and decidability by combining techniques from dynamic-epistemic logic and modal logic of functional dependencies with complex terms for objects. Also, we extend these results to the timed logic with functional symbols and term identity. Finally, we conclude with a brief outlook on how the system proposed here connects with richer temporal logics of system behavior, and with dynamic topological logic.

A digital twin contains up-to-date data-driven models of the physical world being studied and can use simulation to optimise the physical world. However, the analysis made by the digital twin is valid and reliable only when the model is equivalent to the physical world. Maintaining such an equivalent model is challenging, especially when the physical systems being modelled are intelligent and autonomous. The paper focuses in particular on digital twin models of intelligent systems where the systems are knowledge-aware but with limited capability. The digital twin improves the acting of the physical system at a meta-level by accumulating more knowledge in the simulated environment. The modelling of such an intelligent physical system requires replicating the knowledge-awareness capability in the virtual space. Novel equivalence maintaining techniques are needed, especially in synchronising the knowledge between the model and the physical system. This paper proposes the notion of knowledge equivalence and an equivalence maintaining approach by knowledge comparison and updates. A quantitative analysis of the proposed approach confirms that compared to state equivalence, knowledge equivalence maintenance can tolerate deviation thus reducing unnecessary updates and achieve more Pareto efficient solutions for the trade-off between update overhead and simulation reliability.

Present-day atomistic simulations generate long trajectories of ever more complex systems. Analyzing these data, discovering metastable states, and uncovering their nature is becoming increasingly challenging. In this paper, we first use the variational approach to conformation dynamics to discover the slowest dynamical modes of the simulations. This allows the different metastable states of the system to be located and organized hierarchically. The physical descriptors that characterize metastable states are discovered by means of a machine learning method. We show in the cases of two proteins, Chignolin and Bovine Pancreatic Trypsin Inhibitor, how such analysis can be effortlessly performed in a matter of seconds. Another strength of our approach is that it can be applied to the analysis of both unbiased and biased simulations.

Reinforcement learning is one of the core components in designing an artificial intelligent system emphasizing real-time response. Reinforcement learning influences the system to take actions within an arbitrary environment either having previous knowledge about the environment model or not. In this paper, we present a comprehensive study on Reinforcement Learning focusing on various dimensions including challenges, the recent development of different state-of-the-art techniques, and future directions. The fundamental objective of this paper is to provide a framework for the presentation of available methods of reinforcement learning that is informative enough and simple to follow for the new researchers and academics in this domain considering the latest concerns. First, we illustrated the core techniques of reinforcement learning in an easily understandable and comparable way. Finally, we analyzed and depicted the recent developments in reinforcement learning approaches. My analysis pointed out that most of the models focused on tuning policy values rather than tuning other things in a particular state of reasoning.

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