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Many scientific software platforms provide plugin mechanisms that simplify the integration, deployment, and execution of externally developed functionality. One of the most widely used platforms in the imaging space is Fiji, a popular open-source application for scientific image analysis. Fiji incorporates and builds on the ImageJ and ImageJ2 platforms, which provide a powerful plugin architecture used by thousands of plugins to solve a wide variety of problems. This capability is a major part of Fiji's success, and it has become a widely used biological image analysis tool and a target for new functionality. However, a plugin-based software architecture cannot unify disparate platforms operating on incompatible data structures; interoperability necessitates the creation of adaptation or "bridge" layers to translate data and invoke functionality. As a result, while platforms like Fiji enable a high degree of interconnectivity and extensibility, they were not fundamentally designed to integrate across the many data types, programming languages, and architectural differences of various software platforms.To help address this challenge, we present SciJava Ops, a foundational software library for expressing algorithms as plugins in a unified and extensible way. Continuing the evolution of Fiji's SciJava plugin mechanism, SciJava Ops enables users to harness algorithms from various software platforms within a central execution environment. In addition, SciJava Ops automatically adapts data into the most appropriate structure for each algorithm, allowing users to freely and transparently combine algorithms from otherwise incompatible tools. While SciJava Ops is initially distributed as a Fiji update site, the framework does not require Fiji, ImageJ, or ImageJ2, and would be suitable for integration with additional image analysis platforms.

Rapid developments in streaming data technologies have enabled real-time monitoring of human activity that can deliver high-resolution data on health variables over trajectories or paths carved out by subjects as they conduct their daily physical activities. Wearable devices, such as wrist-worn sensors that monitor gross motor activity, have become prevalent and have kindled the emerging field of ``spatial energetics'' in environmental health sciences. We devise a Bayesian inferential framework for analyzing such data while accounting for information available on specific spatial coordinates comprising a trajectory or path using a Global Positioning System (GPS) device embedded within the wearable device. We offer full probabilistic inference with uncertainty quantification using spatial-temporal process models adapted for data generated from ``actigraph'' units as the subject traverses a path or trajectory in their daily routine. Anticipating the need for fast inference for mobile health data, we pursue exact inference using conjugate Bayesian models and employ predictive stacking to assimilate inference across these individual models. This circumvents issues with iterative estimation algorithms such as Markov chain Monte Carlo. We devise Bayesian predictive stacking in this context for models that treat time as discrete epochs and that treat time as continuous. We illustrate our methods with simulation experiments and analysis of data from the Physical Activity through Sustainable Transport Approaches (PASTA-LA) study conducted by the Fielding School of Public Health at the University of California, Los Angeles.

In software development, developers frequently apply maintenance activities to the source code that change a few lines by a single commit. A good understanding of the characteristics of such small changes can support quality assurance approaches (e.g., automated program repair), as it is likely that small changes are addressing deficiencies in other changes; thus, understanding the reasons for creating small changes can help understand the types of errors introduced. Eventually, these reasons and the types of errors can be used to enhance quality assurance approaches for improving code quality. While prior studies used code churns to characterize and investigate the small changes, such a definition has a critical limitation. Specifically, it loses the information of changed tokens in a line. For example, this definition fails to distinguish the following two one-line changes: (1) changing a string literal to fix a displayed message and (2) changing a function call and adding a new parameter. These are definitely maintenance activities, but we deduce that researchers and practitioners are interested in supporting the latter change. To address this limitation, in this paper, we define micro commits, a type of small change based on changed tokens. Our goal is to quantify small changes using changed tokens. Changed tokens allow us to identify small changes more precisely. In fact, this token-level definition can distinguish the above example. We investigate defined micro commits in four OSS projects and understand their characteristics as the first empirical study on token-based micro commits. We find that micro commits mainly replace a single name or literal token, and micro commits are more likely used to fix bugs. Additionally, we propose the use of token-based information to support software engineering approaches in which very small changes significantly affect their effectiveness.

Edge computing provides resources for IoT workloads at the network edge. Monitoring systems are vital for efficiently managing resources and application workloads by collecting, storing, and providing relevant information about the state of the resources. However, traditional monitoring systems have a centralized architecture for both data plane and control plane, which increases latency, creates a failure bottleneck, and faces challenges in providing quick and trustworthy data in volatile edge environments, especially where infrastructures are often built upon failure-prone, unsophisticated computing and network resources. Thus, we propose DEMon, a decentralized, self-adaptive monitoring system for edge. DEMon leverages the stochastic gossip communication protocol at its core. It develops efficient protocols for information dissemination, communication, and retrieval, avoiding a single point of failure and ensuring fast and trustworthy data access. Its decentralized control enables self-adaptive management of monitoring parameters, addressing the trade-offs between the quality of service of monitoring and resource consumption. We implement the proposed system as a lightweight and portable container-based system and evaluate it through experiments. We also present a use case demonstrating its feasibility. The results show that DEMon efficiently disseminates and retrieves the monitoring information, addressing the challenges of edge monitoring.

To enable context-aware computer assistance in the operating room of the future, cognitive systems need to understand automatically which surgical phase is being performed by the medical team. The primary source of information for surgical phase recognition is typically video, which presents two challenges: extracting meaningful features from the video stream and effectively modeling temporal information in the sequence of visual features. For temporal modeling, attention mechanisms have gained popularity due to their ability to capture long-range dependencies. In this paper, we explore design choices for attention in existing temporal models for surgical phase recognition and propose a novel approach that uses attention more effectively and does not require hand-crafted constraints: TUNeS, an efficient and simple temporal model that incorporates self-attention at the core of a convolutional U-Net structure. In addition, we propose to train the feature extractor, a standard CNN, together with an LSTM on preferably long video segments, i.e., with long temporal context. In our experiments, almost all temporal models performed better on top of feature extractors that were trained with longer temporal context. On these contextualized features, TUNeS achieves state-of-the-art results on the Cholec80 dataset. This study offers new insights on how to use attention mechanisms to build accurate and efficient temporal models for surgical phase recognition. Implementing automatic surgical phase recognition is essential to automate the analysis and optimization of surgical workflows and to enable context-aware computer assistance during surgery, thus ultimately improving patient care.

With the increasing maturity and scale of quantum hardware and its integration into HPC systems, there is a need to develop robust techniques for developing, characterizing, and benchmarking quantum-HPC applications and middleware systems. This requires a better understanding of interaction, coupling, and common execution patterns between quantum and classical workload tasks and components. This paper identifies six quantum-HPC execution motifs - recurring execution patterns characterized by distinct coupling and interaction modes. These motifs provide the basis for a suite of quantum mini-apps - simplified application prototypes that encapsulate essential characteristics of production systems. To support these developments, we introduce a mini-app framework that offers the necessary abstractions for creating and executing mini-apps across heterogeneous quantum-HPC infrastructure, making it a valuable tool for performance characterizations and middleware development.

Recommender systems play a pivotal role in helping users navigate an overwhelming selection of products and services. On online platforms, users have the opportunity to share feedback in various modes, including numerical ratings, textual reviews, and likes/dislikes. Traditional recommendation systems rely on users explicit ratings or implicit interactions (e.g. likes, clicks, shares, saves) to learn user preferences and item characteristics. Beyond these numerical ratings, textual reviews provide insights into users fine-grained preferences and item features. Analyzing these reviews is crucial for enhancing the performance and interpretability of personalized recommendation results. In recent years, review-based recommender systems have emerged as a significant sub-field in this domain. In this paper, we provide a comprehensive overview of the developments in review-based recommender systems over recent years, highlighting the importance of reviews in recommender systems, as well as the challenges associated with extracting features from reviews and integrating them into ratings. Specifically, we present a categorization of these systems and summarize the state-of-the-art methods, analyzing their unique features, effectiveness, and limitations. Finally, we propose potential directions for future research, including the integration of multimodal data, multi-criteria rating information, and ethical considerations.

Temporal data, notably time series and spatio-temporal data, are prevalent in real-world applications. They capture dynamic system measurements and are produced in vast quantities by both physical and virtual sensors. Analyzing these data types is vital to harnessing the rich information they encompass and thus benefits a wide range of downstream tasks. Recent advances in large language and other foundational models have spurred increased use of these models in time series and spatio-temporal data mining. Such methodologies not only enable enhanced pattern recognition and reasoning across diverse domains but also lay the groundwork for artificial general intelligence capable of comprehending and processing common temporal data. In this survey, we offer a comprehensive and up-to-date review of large models tailored (or adapted) for time series and spatio-temporal data, spanning four key facets: data types, model categories, model scopes, and application areas/tasks. Our objective is to equip practitioners with the knowledge to develop applications and further research in this underexplored domain. We primarily categorize the existing literature into two major clusters: large models for time series analysis (LM4TS) and spatio-temporal data mining (LM4STD). On this basis, we further classify research based on model scopes (i.e., general vs. domain-specific) and application areas/tasks. We also provide a comprehensive collection of pertinent resources, including datasets, model assets, and useful tools, categorized by mainstream applications. This survey coalesces the latest strides in large model-centric research on time series and spatio-temporal data, underscoring the solid foundations, current advances, practical applications, abundant resources, and future research opportunities.

Autonomic computing investigates how systems can achieve (user) specified control outcomes on their own, without the intervention of a human operator. Autonomic computing fundamentals have been substantially influenced by those of control theory for closed and open-loop systems. In practice, complex systems may exhibit a number of concurrent and inter-dependent control loops. Despite research into autonomic models for managing computer resources, ranging from individual resources (e.g., web servers) to a resource ensemble (e.g., multiple resources within a data center), research into integrating Artificial Intelligence (AI) and Machine Learning (ML) to improve resource autonomy and performance at scale continues to be a fundamental challenge. The integration of AI/ML to achieve such autonomic and self-management of systems can be achieved at different levels of granularity, from full to human-in-the-loop automation. In this article, leading academics, researchers, practitioners, engineers, and scientists in the fields of cloud computing, AI/ML, and quantum computing join to discuss current research and potential future directions for these fields. Further, we discuss challenges and opportunities for leveraging AI and ML in next generation computing for emerging computing paradigms, including cloud, fog, edge, serverless and quantum computing environments.

Recommender systems exploit interaction history to estimate user preference, having been heavily used in a wide range of industry applications. However, static recommendation models are difficult to answer two important questions well due to inherent shortcomings: (a) What exactly does a user like? (b) Why does a user like an item? The shortcomings are due to the way that static models learn user preference, i.e., without explicit instructions and active feedback from users. The recent rise of conversational recommender systems (CRSs) changes this situation fundamentally. In a CRS, users and the system can dynamically communicate through natural language interactions, which provide unprecedented opportunities to explicitly obtain the exact preference of users. Considerable efforts, spread across disparate settings and applications, have been put into developing CRSs. Existing models, technologies, and evaluation methods for CRSs are far from mature. In this paper, we provide a systematic review of the techniques used in current CRSs. We summarize the key challenges of developing CRSs into five directions: (1) Question-based user preference elicitation. (2) Multi-turn conversational recommendation strategies. (3) Dialogue understanding and generation. (4) Exploitation-exploration trade-offs. (5) Evaluation and user simulation. These research directions involve multiple research fields like information retrieval (IR), natural language processing (NLP), and human-computer interaction (HCI). Based on these research directions, we discuss some future challenges and opportunities. We provide a road map for researchers from multiple communities to get started in this area. We hope this survey helps to identify and address challenges in CRSs and inspire future research.