Minimum Spanning Trees are a well-studied subset of graph problems. While classical algorithms have existed to solve these problems for decades, new variations and application areas are constantly being discovered. When dealing with large graph problems, however, memory constraints can often be limiting, especially when using these classical methods in memory restricted environments. In this work, we propose an augmentation of Prim's algorithm that can be empirically shown to solve MST problems with a reduction in auxiliary memory usage of over 90%, and a margin of error of less than 0.3%.
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Using large language models (LLMs) for source code has recently gained attention. LLMs, such as Transformer-based models like Codex and ChatGPT, have been shown to be highly capable of solving a wide range of programming problems. However, the extent to which LLMs understand problem descriptions and generate programs accordingly or just retrieve source code from the most relevant problem in training data based on superficial cues has not been discovered yet. To explore this research question, we conduct experiments to understand the robustness of several popular LLMs, CodeGen and GPT-3.5 series models, capable of tackling code generation tasks in introductory programming problems. Our experimental results show that CodeGen and Codex are sensitive to the superficial modifications of problem descriptions and significantly impact code generation performance. Furthermore, we observe that Codex relies on variable names, as randomized variables decrease the solved rate significantly. However, the state-of-the-art (SOTA) models, such as InstructGPT and ChatGPT, show higher robustness to superficial modifications and have an outstanding capability for solving programming problems. This highlights the fact that slight modifications to the prompts given to the LLMs can greatly affect code generation performance, and careful formatting of prompts is essential for high-quality code generation, while the SOTA models are becoming more robust to perturbations.
Neural networks have in recent years shown promise for helping software engineers write programs and even formally verify them. While semantic information plays a crucial part in these processes, it remains unclear to what degree popular neural architectures like transformers are capable of modeling that information. This paper examines the behavior of neural networks learning algorithms relevant to programs and formal verification proofs through the lens of mechanistic interpretability, focusing in particular on structural recursion. Structural recursion is at the heart of tasks on which symbolic tools currently outperform neural models, like inferring semantic relations between datatypes and emulating program behavior. We evaluate the ability of transformer models to learn to emulate the behavior of structurally recursive functions from input-output examples. Our evaluation includes empirical and conceptual analyses of the limitations and capabilities of transformer models in approximating these functions, as well as reconstructions of the ``shortcut" algorithms the model learns. By reconstructing these algorithms, we are able to correctly predict 91 percent of failure cases for one of the approximated functions. Our work provides a new foundation for understanding the behavior of neural networks that fail to solve the very tasks they are trained for.
In this article, we present a method for increasing adaptivity of an existing robust estimation algorithm by learning two parameters to better fit the residual distribution. The analyzed method uses these two parameters to calculate weights for Iterative Re-weighted Least Squares. This adaptive nature of the weights can be helpful in situations where the noise level varies in the measurements. We test our algorithm first on the point cloud registration problem with synthetic data sets and LiDAR odometry with open source real-world data sets. We show that the existing approach needs an additional manual tuning of a residual scale parameter which our method directly learns from data and has similar or better performance. We further present the idea of decoupling scale and shape parameters to improve performance of the algorithm. We give detailed analysis of our algorithm along with its comparison with similar well-known algorithms from literature to show the benefits of the proposed approach.
The stochastic block model is a canonical random graph model for clustering and community detection on network-structured data. Decades of extensive study on the problem have established many profound results, among which the phase transition at the Kesten-Stigum threshold is particularly interesting both from a mathematical and an applied standpoint. It states that no estimator based on the network topology can perform substantially better than chance on sparse graphs if the model parameter is below certain threshold. Nevertheless, if we slightly extend the horizon to the ubiquitous semi-supervised setting, such a fundamental limitation will disappear completely. We prove that with arbitrary fraction of the labels revealed, the detection problem is feasible throughout the parameter domain. Moreover, we introduce two efficient algorithms, one combinatorial and one based on optimization, to integrate label information with graph structures. Our work brings a new perspective to stochastic model of networks and semidefinite program research.
In this work, we propose an extension of telescopic derivative operators for the DGSEM with Gauss nodes, and we prove that this formulation is equivalent to its usual matrix counterpart. Among other possible applications, this allows extending the stabilization methods already developed for Gauss-Lobatto nodes to Gauss nodes, also ensuring properties such as entropy stability while retaining their improved accuracy.
The numerical solution of differential equations using machine learning-based approaches has gained significant popularity. Neural network-based discretization has emerged as a powerful tool for solving differential equations by parameterizing a set of functions. Various approaches, such as the deep Ritz method and physics-informed neural networks, have been developed for numerical solutions. Training algorithms, including gradient descent and greedy algorithms, have been proposed to solve the resulting optimization problems. In this paper, we focus on the variational formulation of the problem and propose a Gauss- Newton method for computing the numerical solution. We provide a comprehensive analysis of the superlinear convergence properties of this method, along with a discussion on semi-regular zeros of the vanishing gradient. Numerical examples are presented to demonstrate the efficiency of the proposed Gauss-Newton method.
Graph neural networks generalize conventional neural networks to graph-structured data and have received widespread attention due to their impressive representation ability. In spite of the remarkable achievements, the performance of Euclidean models in graph-related learning is still bounded and limited by the representation ability of Euclidean geometry, especially for datasets with highly non-Euclidean latent anatomy. Recently, hyperbolic space has gained increasing popularity in processing graph data with tree-like structure and power-law distribution, owing to its exponential growth property. In this survey, we comprehensively revisit the technical details of the current hyperbolic graph neural networks, unifying them into a general framework and summarizing the variants of each component. More importantly, we present various HGNN-related applications. Last, we also identify several challenges, which potentially serve as guidelines for further flourishing the achievements of graph learning in hyperbolic spaces.
Graph convolution networks (GCN) are increasingly popular in many applications, yet remain notoriously hard to train over large graph datasets. They need to compute node representations recursively from their neighbors. Current GCN training algorithms suffer from either high computational costs that grow exponentially with the number of layers, or high memory usage for loading the entire graph and node embeddings. In this paper, we propose a novel efficient layer-wise training framework for GCN (L-GCN), that disentangles feature aggregation and feature transformation during training, hence greatly reducing time and memory complexities. We present theoretical analysis for L-GCN under the graph isomorphism framework, that L-GCN leads to as powerful GCNs as the more costly conventional training algorithm does, under mild conditions. We further propose L^2-GCN, which learns a controller for each layer that can automatically adjust the training epochs per layer in L-GCN. Experiments show that L-GCN is faster than state-of-the-arts by at least an order of magnitude, with a consistent of memory usage not dependent on dataset size, while maintaining comparable prediction performance. With the learned controller, L^2-GCN can further cut the training time in half. Our codes are available at //github.com/Shen-Lab/L2-GCN.
Since deep neural networks were developed, they have made huge contributions to everyday lives. Machine learning provides more rational advice than humans are capable of in almost every aspect of daily life. However, despite this achievement, the design and training of neural networks are still challenging and unpredictable procedures. To lower the technical thresholds for common users, automated hyper-parameter optimization (HPO) has become a popular topic in both academic and industrial areas. This paper provides a review of the most essential topics on HPO. The first section introduces the key hyper-parameters related to model training and structure, and discusses their importance and methods to define the value range. Then, the research focuses on major optimization algorithms and their applicability, covering their efficiency and accuracy especially for deep learning networks. This study next reviews major services and toolkits for HPO, comparing their support for state-of-the-art searching algorithms, feasibility with major deep learning frameworks, and extensibility for new modules designed by users. The paper concludes with problems that exist when HPO is applied to deep learning, a comparison between optimization algorithms, and prominent approaches for model evaluation with limited computational resources.
Graph convolutional network (GCN) has been successfully applied to many graph-based applications; however, training a large-scale GCN remains challenging. Current SGD-based algorithms suffer from either a high computational cost that exponentially grows with number of GCN layers, or a large space requirement for keeping the entire graph and the embedding of each node in memory. In this paper, we propose Cluster-GCN, a novel GCN algorithm that is suitable for SGD-based training by exploiting the graph clustering structure. Cluster-GCN works as the following: at each step, it samples a block of nodes that associate with a dense subgraph identified by a graph clustering algorithm, and restricts the neighborhood search within this subgraph. This simple but effective strategy leads to significantly improved memory and computational efficiency while being able to achieve comparable test accuracy with previous algorithms. To test the scalability of our algorithm, we create a new Amazon2M data with 2 million nodes and 61 million edges which is more than 5 times larger than the previous largest publicly available dataset (Reddit). For training a 3-layer GCN on this data, Cluster-GCN is faster than the previous state-of-the-art VR-GCN (1523 seconds vs 1961 seconds) and using much less memory (2.2GB vs 11.2GB). Furthermore, for training 4 layer GCN on this data, our algorithm can finish in around 36 minutes while all the existing GCN training algorithms fail to train due to the out-of-memory issue. Furthermore, Cluster-GCN allows us to train much deeper GCN without much time and memory overhead, which leads to improved prediction accuracy---using a 5-layer Cluster-GCN, we achieve state-of-the-art test F1 score 99.36 on the PPI dataset, while the previous best result was 98.71 by [16]. Our codes are publicly available at //github.com/google-research/google-research/tree/master/cluster_gcn.
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