Modelling in biology must adapt to increasingly complex and massive data. The efficiency of the inference algorithms used to estimate model parameters is therefore questioned. Many of these are based on stochastic optimization processes which waste a significant part of the computation time due to their rejection sampling approaches. We introduce the Fixed Landscape Inference MethOd (flimo), a new likelihood-free inference method for continuous state-space stochastic models. It applies deterministic gradient-based optimization algorithms to obtain a point estimate of the parameters, minimizing the difference between the data and some simulations according to some prescribed summary statistics. In this sense, it is analogous to Approximate Bayesian Computation (ABC). Like ABC, it can also provide an approximation of the distribution of the parameters. Three applications are proposed: a usual theoretical example, namely the inference of the parameters of g-and-k distributions; a population genetics problem, not so simple as it seems, namely the inference of a selective value from time series in a Wright-Fisher model; and simulations from a Ricker model, representing chaotic population dynamics. In the two first applications, the results show a drastic reduction of the computational time needed for the inference phase compared to the other methods, despite an equivalent accuracy. Even when likelihood-based methods are applicable, the simplicity and efficiency of flimo make it a compelling alternative. Implementations in Julia and in R are available on //metabarcoding.org/flimo. To run flimo, the user must simply be able to simulate data according to the chosen model.
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The goal of continual learning is to improve the performance of recognition models in learning sequentially arrived data. Although most existing works are established on the premise of learning from scratch, growing efforts have been devoted to incorporating the benefits of pre-training. However, how to adaptively exploit the pre-trained knowledge for each incremental task while maintaining its generalizability remains an open question. In this work, we present an extensive analysis for continual learning on a pre-trained model (CLPM), and attribute the key challenge to a progressive overfitting problem. Observing that selectively reducing the learning rate can almost resolve this issue in the representation layer, we propose a simple but extremely effective approach named Slow Learner with Classifier Alignment (SLCA), which further improves the classification layer by modeling the class-wise distributions and aligning the classification layers in a post-hoc fashion. Across a variety of scenarios, our proposal provides substantial improvements for CLPM (e.g., up to 49.76%, 50.05%, 44.69% and 40.16% on Split CIFAR-100, Split ImageNet-R, Split CUB-200 and Split Cars-196, respectively), and thus outperforms state-of-the-art approaches by a large margin. Based on such a strong baseline, critical factors and promising directions are analyzed in-depth to facilitate subsequent research. Code has been made available at: //github.com/GengDavid/SLCA.
Online auction scenarios, such as bidding searches on advertising platforms, often require bidders to participate repeatedly in auctions for the same or similar items. We design an algorithm for adaptive automatic bidding in repeated auctions in which the seller and other bidders also update their strategies. We apply and improve the opponent modeling algorithm to allow bidders to learn optimal bidding strategies in this multiagent reinforcement learning environment. The algorithm uses almost no private information about the opponent or restrictions on the strategy space, so it can be extended to multiple scenarios. Our algorithm improves the utility compared to both static bidding strategies and dynamic learning strategies. We hope the application of opponent modeling in auctions will promote the research of automatic bidding strategies in online auctions and the design of non-incentive compatible auction mechanisms.
Assessments of algorithmic bias in large language models (LLMs) are generally catered to uncovering systemic discrimination based on protected characteristics such as sex and ethnicity. However, there are over 180 documented cognitive biases that pervade human reasoning and decision making that are routinely ignored when discussing the ethical complexities of AI. We demonstrate the presence of these cognitive biases in LLMs and discuss the implications of using biased reasoning under the guise of expertise. We call for stronger education, risk management, and continued research as widespread adoption of this technology increases. Finally, we close with a set of best practices for when and how to employ this technology as widespread adoption continues to grow.
Current captioning approaches tend to generate correct but "generic" descriptions that lack real-world knowledge, e.g., named entities and contextual information. Considering that Vision-Language Pre-Training (VLP) models master massive such knowledge from large-scale web-harvested data, it is promising to utilize the generalizability of VLP models to incorporate knowledge into image descriptions. However, using VLP models faces challenges: zero-shot inference suffers from knowledge hallucination that leads to low-quality descriptions, but the generic bias in downstream task fine-tuning hinders the VLP model from expressing knowledge. To address these concerns, we propose a simple yet effective method called Knowledge-guided Replay (K-Replay), which enables the retention of pre-training knowledge during fine-tuning. Our approach consists of two parts: (1) a knowledge prediction task on automatically collected replay exemplars to continuously awaken the VLP model's memory about knowledge, thus preventing the model from collapsing into the generic pattern; (2) a knowledge distillation constraint to improve the faithfulness of generated descriptions hence alleviating the knowledge hallucination. To evaluate knowledge-enhanced descriptions, we construct a novel captioning benchmark KnowCap, containing knowledge of landmarks, famous brands, special foods and movie characters. Experimental results show that our approach effectively incorporates knowledge into descriptions, outperforming strong VLP baseline by 20.9 points (78.7->99.6) in CIDEr score and 20.5 percentage points (34.0%->54.5%) in knowledge recognition accuracy. Our code and data is available at //github.com/njucckevin/KnowCap.
Multispectral pedestrian detection achieves better visibility in challenging conditions and thus has a broad application in various tasks, for which both the accuracy and computational cost are of paramount importance. Most existing approaches treat RGB and infrared modalities equally, typically adopting two symmetrical CNN backbones for multimodal feature extraction, which ignores the substantial differences between modalities and brings great difficulty for the reduction of the computational cost as well as effective crossmodal fusion. In this work, we propose a novel and efficient framework named WCCNet that is able to differentially extract rich features of different spectra with lower computational complexity and semantically rearranges these features for effective crossmodal fusion. Specifically, the discrete wavelet transform (DWT) allowing fast inference and training speed is embedded to construct a dual-stream backbone for efficient feature extraction. The DWT layers of WCCNet extract frequency components for infrared modality, while the CNN layers extract spatial-domain features for RGB modality. This methodology not only significantly reduces the computational complexity, but also improves the extraction of infrared features to facilitate the subsequent crossmodal fusion. Based on the well extracted features, we elaborately design the crossmodal rearranging fusion module (CMRF), which can mitigate spatial misalignment and merge semantically complementary features of spatially-related local regions to amplify the crossmodal complementary information. We conduct comprehensive evaluations on KAIST and FLIR benchmarks, in which WCCNet outperforms state-of-the-art methods with considerable computational efficiency and competitive accuracy. We also perform the ablation study and analyze thoroughly the impact of different components on the performance of WCCNet.
In pace with developments in the research field of artificial intelligence, knowledge graphs (KGs) have attracted a surge of interest from both academia and industry. As a representation of semantic relations between entities, KGs have proven to be particularly relevant for natural language processing (NLP), experiencing a rapid spread and wide adoption within recent years. Given the increasing amount of research work in this area, several KG-related approaches have been surveyed in the NLP research community. However, a comprehensive study that categorizes established topics and reviews the maturity of individual research streams remains absent to this day. Contributing to closing this gap, we systematically analyzed 507 papers from the literature on KGs in NLP. Our survey encompasses a multifaceted review of tasks, research types, and contributions. As a result, we present a structured overview of the research landscape, provide a taxonomy of tasks, summarize our findings, and highlight directions for future work.
Although measuring held-out accuracy has been the primary approach to evaluate generalization, it often overestimates the performance of NLP models, while alternative approaches for evaluating models either focus on individual tasks or on specific behaviors. Inspired by principles of behavioral testing in software engineering, we introduce CheckList, a task-agnostic methodology for testing NLP models. CheckList includes a matrix of general linguistic capabilities and test types that facilitate comprehensive test ideation, as well as a software tool to generate a large and diverse number of test cases quickly. We illustrate the utility of CheckList with tests for three tasks, identifying critical failures in both commercial and state-of-art models. In a user study, a team responsible for a commercial sentiment analysis model found new and actionable bugs in an extensively tested model. In another user study, NLP practitioners with CheckList created twice as many tests, and found almost three times as many bugs as users without it.
Many tasks in natural language processing can be viewed as multi-label classification problems. However, most of the existing models are trained with the standard cross-entropy loss function and use a fixed prediction policy (e.g., a threshold of 0.5) for all the labels, which completely ignores the complexity and dependencies among different labels. In this paper, we propose a meta-learning method to capture these complex label dependencies. More specifically, our method utilizes a meta-learner to jointly learn the training policies and prediction policies for different labels. The training policies are then used to train the classifier with the cross-entropy loss function, and the prediction policies are further implemented for prediction. Experimental results on fine-grained entity typing and text classification demonstrate that our proposed method can obtain more accurate multi-label classification results.
We propose a novel attention gate (AG) model for medical imaging that automatically learns to focus on target structures of varying shapes and sizes. Models trained with AGs implicitly learn to suppress irrelevant regions in an input image while highlighting salient features useful for a specific task. This enables us to eliminate the necessity of using explicit external tissue/organ localisation modules of cascaded convolutional neural networks (CNNs). AGs can be easily integrated into standard CNN architectures such as the U-Net model with minimal computational overhead while increasing the model sensitivity and prediction accuracy. The proposed Attention U-Net architecture is evaluated on two large CT abdominal datasets for multi-class image segmentation. Experimental results show that AGs consistently improve the prediction performance of U-Net across different datasets and training sizes while preserving computational efficiency. The code for the proposed architecture is publicly available.
Many natural language processing tasks solely rely on sparse dependencies between a few tokens in a sentence. Soft attention mechanisms show promising performance in modeling local/global dependencies by soft probabilities between every two tokens, but they are not effective and efficient when applied to long sentences. By contrast, hard attention mechanisms directly select a subset of tokens but are difficult and inefficient to train due to their combinatorial nature. In this paper, we integrate both soft and hard attention into one context fusion model, "reinforced self-attention (ReSA)", for the mutual benefit of each other. In ReSA, a hard attention trims a sequence for a soft self-attention to process, while the soft attention feeds reward signals back to facilitate the training of the hard one. For this purpose, we develop a novel hard attention called "reinforced sequence sampling (RSS)", selecting tokens in parallel and trained via policy gradient. Using two RSS modules, ReSA efficiently extracts the sparse dependencies between each pair of selected tokens. We finally propose an RNN/CNN-free sentence-encoding model, "reinforced self-attention network (ReSAN)", solely based on ReSA. It achieves state-of-the-art performance on both Stanford Natural Language Inference (SNLI) and Sentences Involving Compositional Knowledge (SICK) datasets.
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