Previous approaches for automatic lay summarisation are exclusively reliant on the source article that, given it is written for a technical audience (e.g., researchers), is unlikely to explicitly define all technical concepts or state all of the background information that is relevant for a lay audience. We address this issue by augmenting eLife, an existing biomedical lay summarisation dataset, with article-specific knowledge graphs, each containing detailed information on relevant biomedical concepts. Using both automatic and human evaluations, we systematically investigate the effectiveness of three different approaches for incorporating knowledge graphs within lay summarisation models, with each method targeting a distinct area of the encoder-decoder model architecture. Our results confirm that integrating graph-based domain knowledge can significantly benefit lay summarisation by substantially increasing the readability of generated text and improving the explanation of technical concepts.
We present W.A.L.T, a transformer-based approach for photorealistic video generation via diffusion modeling. Our approach has two key design decisions. First, we use a causal encoder to jointly compress images and videos within a unified latent space, enabling training and generation across modalities. Second, for memory and training efficiency, we use a window attention architecture tailored for joint spatial and spatiotemporal generative modeling. Taken together these design decisions enable us to achieve state-of-the-art performance on established video (UCF-101 and Kinetics-600) and image (ImageNet) generation benchmarks without using classifier free guidance. Finally, we also train a cascade of three models for the task of text-to-video generation consisting of a base latent video diffusion model, and two video super-resolution diffusion models to generate videos of $512 \times 896$ resolution at $8$ frames per second.
Early action recognition is an important and challenging problem that enables the recognition of an action from a partially observed video stream where the activity is potentially unfinished or even not started. In this work, we propose a novel model that learns a prototypical representation of the full action for each class and uses it to regularize the architecture and the visual representations of the partial observations. Our model is very simple in design and also efficient. We decompose the video into short clips, where a visual encoder extracts features from each clip independently. Later, a decoder aggregates together in an online fashion features from all the clips for the final class prediction. During training, for each partial observation, the model is jointly trained to both predict the label as well as the action prototypical representation which acts as a regularizer. We evaluate our method on multiple challenging real-world datasets and outperform the current state-of-the-art by a significant margin. For example, on early recognition observing only the first 10% of each video, our method improves the SOTA by +2.23 Top-1 accuracy on Something-Something-v2, +3.55 on UCF-101, +3.68 on SSsub21, and +5.03 on EPIC-Kitchens-55, where prior work used either multi-modal inputs (e.g. optical-flow) or batched inference. Finally, we also present exhaustive ablation studies to motivate the design choices we made, as well as gather insights regarding what our model is learning semantically.
In modern days, the ability to carry out computations in parallel is key to efficient implementations of computationally intensive algorithms. This paper investigates the applicability of the previously proposed Augmented Island Resampling Particle Filter (AIRPF) -- an algorithm designed for parallel implementations -- to particle Markov Chain Monte Carlo (PMCMC). We show that AIRPF produces a non-negative unbiased estimator of the marginal likelihood and hence is suitable for PMCMC. We also prove stability properties, similar to those of the $\alpha$SMC algorithm, for AIRPF. This implies that the error of AIRPF can be bounded uniformly in time by controlling the effective number of filters, which in turn can be done by adaptively constraining the interactions between filters. We demonstrate the superiority of AIRPF over independent Bootstrap Particle Filters, not only numerically, but also theoretically. To this end, we extend the previously proposed collision analysis approach to derive an explicit expression for the variance of the marginal likelihood estimate. This expression admits exact evaluation of the variance in some simple scenarios as we shall also demonstrate.
Synthesising verifiably correct controllers for dynamical systems is crucial for safety-critical problems. To achieve this, it is important to account for uncertainty in a robust manner, while at the same time it is often of interest to avoid being overly conservative with the view of achieving a better cost. We propose a method for verifiably safe policy synthesis for a class of finite state models, under the presence of structural uncertainty. In particular, we consider uncertain parametric Markov decision processes (upMDPs), a special class of Markov decision processes, with parameterised transition functions, where such parameters are drawn from a (potentially) unknown distribution. Our framework leverages recent advancements in the so-called scenario approach theory, where we represent the uncertainty by means of scenarios, and provide guarantees on synthesised policies satisfying probabilistic computation tree logic (PCTL) formulae. We consider several common benchmarks/problems and compare our work to recent developments for verifying upMDPs.
Detecting anomalies on network traffic is a complex task due to the massive amount of traffic flows in today's networks, as well as the highly-dynamic nature of traffic over time. In this paper, we propose the use of Graph Neural Networks (GNN) for network traffic anomaly detection. We formulate the problem as contextual anomaly detection on network traffic measurements, and propose a custom GNN-based solution that detects traffic anomalies on origin-destination flows. In our evaluation, we use real-world data from Abilene (6 months), and make a comparison with other widely used methods for the same task (PCA, EWMA, RNN). The results show that the anomalies detected by our solution are quite complementary to those captured by the baselines (with a max. of 36.33% overlapping anomalies for PCA). Moreover, we manually inspect the anomalies detected by our method, and find that a large portion of them can be visually validated by a network expert (64% with high confidence, 18% with mid confidence, 18% normal traffic). Lastly, we analyze the characteristics of the anomalies through two paradigmatic cases that are quite representative of the bulk of anomalies.
Molecular docking is critical to structure-based virtual screening, yet the throughput of such workflows is limited by the expensive optimization of scoring functions involved in most docking algorithms. We explore how machine learning can accelerate this process by learning a scoring function with a functional form that allows for more rapid optimization. Specifically, we define the scoring function to be the cross-correlation of multi-channel ligand and protein scalar fields parameterized by equivariant graph neural networks, enabling rapid optimization over rigid-body degrees of freedom with fast Fourier transforms. The runtime of our approach can be amortized at several levels of abstraction, and is particularly favorable for virtual screening settings with a common binding pocket. We benchmark our scoring functions on two simplified docking-related tasks: decoy pose scoring and rigid conformer docking. Our method attains similar but faster performance on crystal structures compared to the widely-used Vina and Gnina scoring functions, and is more robust on computationally predicted structures. Code is available at //github.com/bjing2016/scalar-fields.
Answer Set Programming (ASP) is a widely used declarative programming paradigm that has shown great potential in solving complex computational problems. However, the inability to natively support non-integer arithmetic has been highlighted as a major drawback in real-world applications. This feature is crucial to accurately model and manage real-world data and information as emerged in various contexts, such as the smooth movement of video game characters, the 3D movement of mechanical arms, and data streamed by sensors. Nevertheless, extending ASP in this direction, without affecting its declarative nature and its well-defined semantics, poses non-trivial challenges; thus, no ASP system is able to reason natively with non-integer domains. Indeed, the widespread floating-point arithmetic is not applicable to the ASP case, as the reproducibility of results cannot be guaranteed and the semantics of an ASP program would not be uniquely and declaratively determined, regardless of the employed machine or solver. To overcome such limitations and in the realm of pure ASP, this paper proposes an extension of ASP in which non-integers are approximated to rational numbers, fully granting reproducibility and declarativity. We provide a well-defined semantics for the ASP-Core-2 standard extended with rational numbers and an implementation thereof. We hope this work could serve as a stepping stone towards a more expressive and versatile ASP language that can handle a broader range of real-world problems.
This paper addresses the question whether model knowledge can guide a defender to appropriate decisions, or not, when an attacker intrudes into control systems. The model-based defense scheme considered in this study, namely Bayesian defense mechanism, chooses reasonable reactions through observation of the system's behavior using models of the system's stochastic dynamics, the vulnerability to be exploited, and the attacker's objective. On the other hand, rational attackers take deceptive strategies for misleading the defender into making inappropriate decisions. In this paper, their dynamic decision making is formulated as a stochastic signaling game. It is shown that the belief of the true scenario has a limit in a stochastic sense at an equilibrium based on martingale analysis. This fact implies that there are only two possible cases: the defender asymptotically detects the attack with a firm belief, or the attacker takes actions such that the system's behavior becomes nominal after a finite time step. Consequently, if different scenarios result in different stochastic behaviors, the Bayesian defense mechanism guarantees the system to be secure in an asymptotic manner provided that effective countermeasures are implemented. As an application of the finding, a defensive deception utilizing asymmetric recognition of vulnerabilities exploited by the attacker is analyzed. It is shown that the attacker possibly stops the attack even if the defender is unaware of the exploited vulnerabilities as long as the defender's unawareness is concealed by the defensive deception.
We address the task of automatically scoring the competency of candidates based on textual features, from the automatic speech recognition (ASR) transcriptions in the asynchronous video job interview (AVI). The key challenge is how to construct the dependency relation between questions and answers, and conduct the semantic level interaction for each question-answer (QA) pair. However, most of the recent studies in AVI focus on how to represent questions and answers better, but ignore the dependency information and interaction between them, which is critical for QA evaluation. In this work, we propose a Hierarchical Reasoning Graph Neural Network (HRGNN) for the automatic assessment of question-answer pairs. Specifically, we construct a sentence-level relational graph neural network to capture the dependency information of sentences in or between the question and the answer. Based on these graphs, we employ a semantic-level reasoning graph attention network to model the interaction states of the current QA session. Finally, we propose a gated recurrent unit encoder to represent the temporal question-answer pairs for the final prediction. Empirical results conducted on CHNAT (a real-world dataset) validate that our proposed model significantly outperforms text-matching based benchmark models. Ablation studies and experimental results with 10 random seeds also show the effectiveness and stability of our models.
Aspect based sentiment analysis (ABSA) can provide more detailed information than general sentiment analysis, because it aims to predict the sentiment polarities of the given aspects or entities in text. We summarize previous approaches into two subtasks: aspect-category sentiment analysis (ACSA) and aspect-term sentiment analysis (ATSA). Most previous approaches employ long short-term memory and attention mechanisms to predict the sentiment polarity of the concerned targets, which are often complicated and need more training time. We propose a model based on convolutional neural networks and gating mechanisms, which is more accurate and efficient. First, the novel Gated Tanh-ReLU Units can selectively output the sentiment features according to the given aspect or entity. The architecture is much simpler than attention layer used in the existing models. Second, the computations of our model could be easily parallelized during training, because convolutional layers do not have time dependency as in LSTM layers, and gating units also work independently. The experiments on SemEval datasets demonstrate the efficiency and effectiveness of our models.