We present a registration method for model reduction of parametric partial differential equations with dominating advection effects and moving features. Registration refers to the use of a parameter-dependent mapping to make the set of solutions to these equations more amicable for approximation using classical reduced basis methods. The proposed approach utilizes concepts from optimal transport theory, as we utilize Monge embeddings to construct these mappings in a purely data-driven way. The method relies on one interpretable hyper-parameter. We discuss how our approach relates to existing works that combine model order reduction and optimal transport theory. Numerical results are provided to demonstrate the effect of the registration. This includes a model problem where the solution is itself a probability density and one where it is not.
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We extend our formulation of Merge and Minimalism in terms of Hopf algebras to an algebraic model of a syntactic-semantic interface. We show that methods adopted in the formulation of renormalization (extraction of meaningful physical values) in theoretical physics are relevant to describe the extraction of meaning from syntactic expressions. We show how this formulation relates to computational models of semantics and we answer some recent controversies about implications for generative linguistics of the current functioning of large language models.
The consistency of the maximum likelihood estimator for mixtures of elliptically-symmetric distributions for estimating its population version is shown, where the underlying distribution $P$ is nonparametric and does not necessarily belong to the class of mixtures on which the estimator is based. In a situation where $P$ is a mixture of well enough separated but nonparametric distributions it is shown that the components of the population version of the estimator correspond to the well separated components of $P$. This provides some theoretical justification for the use of such estimators for cluster analysis in case that $P$ has well separated subpopulations even if these subpopulations differ from what the mixture model assumes.
Solutions to many important partial differential equations satisfy bounds constraints, but approximations computed by finite element or finite difference methods typically fail to respect the same conditions. Chang and Nakshatrala enforce such bounds in finite element methods through the solution of variational inequalities rather than linear variational problems. Here, we provide a theoretical justification for this method, including higher-order discretizations. We prove an abstract best approximation result for the linear variational inequality and estimates showing that bounds-constrained polynomials provide comparable approximation power to standard spaces. For any unconstrained approximation to a function, there exists a constrained approximation which is comparable in the $W^{1,p}$ norm. In practice, one cannot efficiently represent and manipulate the entire family of bounds-constrained polynomials, but applying bounds constraints to the coefficients of a polynomial in the Bernstein basis guarantees those constraints on the polynomial. Although our theoretical results do not guaruntee high accuracy for this subset of bounds-constrained polynomials, numerical results indicate optimal orders of accuracy for smooth solutions and sharp resolution of features in convection-diffusion problems, all subject to bounds constraints.
Generalized linear models (GLMs) are routinely used for modeling relationships between a response variable and a set of covariates. The simple form of a GLM comes with easy interpretability, but also leads to concerns about model misspecification impacting inferential conclusions. A popular semi-parametric solution adopted in the frequentist literature is quasi-likelihood, which improves robustness by only requiring correct specification of the first two moments. We develop a robust approach to Bayesian inference in GLMs through quasi-posterior distributions. We show that quasi-posteriors provide a coherent generalized Bayes inference method, while also approximating so-called coarsened posteriors. In so doing, we obtain new insights into the choice of coarsening parameter. Asymptotically, the quasi-posterior converges in total variation to a normal distribution and has important connections with the loss-likelihood bootstrap posterior. We demonstrate that it is also well-calibrated in terms of frequentist coverage. Moreover, the loss-scale parameter has a clear interpretation as a dispersion, and this leads to a consolidated method of moments estimator.
We consider an unknown multivariate function representing a system-such as a complex numerical simulator-taking both deterministic and uncertain inputs. Our objective is to estimate the set of deterministic inputs leading to outputs whose probability (with respect to the distribution of the uncertain inputs) of belonging to a given set is less than a given threshold. This problem, which we call Quantile Set Inversion (QSI), occurs for instance in the context of robust (reliability-based) optimization problems, when looking for the set of solutions that satisfy the constraints with sufficiently large probability. To solve the QSI problem, we propose a Bayesian strategy based on Gaussian process modeling and the Stepwise Uncertainty Reduction (SUR) principle, to sequentially choose the points at which the function should be evaluated to efficiently approximate the set of interest. We illustrate the performance and interest of the proposed SUR strategy through several numerical experiments.
A numerical method is proposed for simulation of composite open quantum systems. It is based on Lindblad master equations and adiabatic elimination. Each subsystem is assumed to converge exponentially towards a stationary subspace, slightly impacted by some decoherence channels and weakly coupled to the other subsystems. This numerical method is based on a perturbation analysis with an asymptotic expansion. It exploits the formulation of the slow dynamics with reduced dimension. It relies on the invariant operators of the local and nominal dissipative dynamics attached to each subsystem. Second-order expansion can be computed only with local numerical calculations. It avoids computations on the tensor-product Hilbert space attached to the full system. This numerical method is particularly well suited for autonomous quantum error correction schemes. Simulations of such reduced models agree with complete full model simulations for typical gates acting on one and two cat-qubits (Z, ZZ and CNOT) when the mean photon number of each cat-qubit is less than 8. For larger mean photon numbers and gates with three cat-qubits (ZZZ and CCNOT), full model simulations are almost impossible whereas reduced model simulations remain accessible. In particular, they capture both the dominant phase-flip error-rate and the very small bit-flip error-rate with its exponential suppression versus the mean photon number.
Brain simulation builds dynamical models to mimic the structure and functions of the brain, while brain-inspired computing (BIC) develops intelligent systems by learning from the structure and functions of the brain. The two fields are intertwined and should share a common programming framework to facilitate each other's development. However, none of the existing software in the fields can achieve this goal, because traditional brain simulators lack differentiability for training, while existing deep learning (DL) frameworks fail to capture the biophysical realism and complexity of brain dynamics. In this paper, we introduce BrainPy, a differentiable brain simulator developed using JAX and XLA, with the aim of bridging the gap between brain simulation and BIC. BrainPy expands upon the functionalities of JAX, a powerful AI framework, by introducing complete capabilities for flexible, efficient, and scalable brain simulation. It offers a range of sparse and event-driven operators for efficient and scalable brain simulation, an abstraction for managing the intricacies of synaptic computations, a modular and flexible interface for constructing multi-scale brain models, and an object-oriented just-in-time compilation approach to handle the memory-intensive nature of brain dynamics. We showcase the efficiency and scalability of BrainPy on benchmark tasks, highlight its differentiable simulation for biologically plausible spiking models, and discuss its potential to support research at the intersection of brain simulation and BIC.
Causal representation learning algorithms discover lower-dimensional representations of data that admit a decipherable interpretation of cause and effect; as achieving such interpretable representations is challenging, many causal learning algorithms utilize elements indicating prior information, such as (linear) structural causal models, interventional data, or weak supervision. Unfortunately, in exploratory causal representation learning, such elements and prior information may not be available or warranted. Alternatively, scientific datasets often have multiple modalities or physics-based constraints, and the use of such scientific, multimodal data has been shown to improve disentanglement in fully unsupervised settings. Consequently, we introduce a causal representation learning algorithm (causalPIMA) that can use multimodal data and known physics to discover important features with causal relationships. Our innovative algorithm utilizes a new differentiable parametrization to learn a directed acyclic graph (DAG) together with a latent space of a variational autoencoder in an end-to-end differentiable framework via a single, tractable evidence lower bound loss function. We place a Gaussian mixture prior on the latent space and identify each of the mixtures with an outcome of the DAG nodes; this novel identification enables feature discovery with causal relationships. Tested against a synthetic and a scientific dataset, our results demonstrate the capability of learning an interpretable causal structure while simultaneously discovering key features in a fully unsupervised setting.
Happ and Greven (2018) developed a methodology for principal components analysis of multivariate functional data for data observed on different dimensional domains. Their approach relies on an estimation of univariate functional principal components for each univariate functional feature. In this paper, we present extensive simulations to investigate choosing the number of principal components to retain. We show empirically that the conventional approach of using a percentage of variance explained threshold for each univariate functional feature may be unreliable when aiming to explain an overall percentage of variance in the multivariate functional data, and thus we advise practitioners to be careful when using it.
We consider the problem of obtaining effective representations for the solutions of linear, vector-valued stochastic differential equations (SDEs) driven by non-Gaussian pure-jump L\'evy processes, and we show how such representations lead to efficient simulation methods. The processes considered constitute a broad class of models that find application across the physical and biological sciences, mathematics, finance and engineering. Motivated by important relevant problems in statistical inference, we derive new, generalised shot-noise simulation methods whenever a normal variance-mean (NVM) mixture representation exists for the driving L\'evy process, including the generalised hyperbolic, normal-Gamma, and normal tempered stable cases. Simple, explicit conditions are identified for the convergence of the residual of a truncated shot-noise representation to a Brownian motion in the case of the pure L\'evy process, and to a Brownian-driven SDE in the case of the L\'evy-driven SDE. These results provide Gaussian approximations to the small jumps of the process under the NVM representation. The resulting representations are of particular importance in state inference and parameter estimation for L\'evy-driven SDE models, since the resulting conditionally Gaussian structures can be readily incorporated into latent variable inference methods such as Markov chain Monte Carlo (MCMC), Expectation-Maximisation (EM), and sequential Monte Carlo.
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